BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022176
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   157   6e-37
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   157   8e-37
ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D sub...   156   1e-36
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   156   1e-36
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...   156   2e-36

>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 3   RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLQERLFLCSDYSQMHICRT 182
           RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA+ANL ERLF  SD SQMH+CR 
Sbjct: 700 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCRK 759

Query: 183 CKHTANVIQRTMRGKHKIRGPYCHYCESAED 275
           C++ ANVIQR++ G  KIRGPYC +C+S ED
Sbjct: 760 CQNMANVIQRSVFGGRKIRGPYCRFCDSVED 790


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/91 (79%), Positives = 78/91 (85%)
 Frame = +3

Query: 3    RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLQERLFLCSDYSQMHICRT 182
            RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA+ANL ERLF  SD SQMHICR 
Sbjct: 898  RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRK 957

Query: 183  CKHTANVIQRTMRGKHKIRGPYCHYCESAED 275
            C + ANVIQR + G  KIRGPYC +CES E+
Sbjct: 958  CNNIANVIQRAVPGGRKIRGPYCRFCESVEE 988


>ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
            [Brachypodium distachyon]
          Length = 1213

 Score =  156 bits (395), Expect = 1e-36
 Identities = 69/91 (75%), Positives = 81/91 (89%)
 Frame = +3

Query: 3    RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLQERLFLCSDYSQMHICRT 182
            RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCL+AHGA+ANL ERLF+ SD+SQMHICRT
Sbjct: 1092 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICRT 1151

Query: 183  CKHTANVIQRTMRGKHKIRGPYCHYCESAED 275
            C+  ANV+ R++ G  +IRGPYC +C S+E+
Sbjct: 1152 CERVANVVMRSVPGGKRIRGPYCGFCRSSEN 1182


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/91 (79%), Positives = 78/91 (85%)
 Frame = +3

Query: 3    RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLQERLFLCSDYSQMHICRT 182
            RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGASANL ERLF  SD SQMHIC+ 
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQK 1141

Query: 183  CKHTANVIQRTMRGKHKIRGPYCHYCESAED 275
            CK+ ANVIQR + G  KIRGPYC  CES ++
Sbjct: 1142 CKNVANVIQRAVPGGRKIRGPYCRVCESVDE 1172


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score =  156 bits (394), Expect = 2e-36
 Identities = 69/91 (75%), Positives = 82/91 (90%)
 Frame = +3

Query: 3    RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLQERLFLCSDYSQMHICRT 182
            RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCL+AHG++ANL ERLFL SD+SQMHIC+T
Sbjct: 1108 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQT 1167

Query: 183  CKHTANVIQRTMRGKHKIRGPYCHYCESAED 275
            C+  ANV+ R++ G  KIRGPYC +C+S+E+
Sbjct: 1168 CERVANVVMRSVPGGKKIRGPYCGFCKSSEN 1198