BLASTX nr result
ID: Cnidium21_contig00022168
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00022168 (1189 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l... 406 e-111 ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [... 405 e-110 ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l... 402 e-110 ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2... 402 e-110 ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp.... 399 e-109 >ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max] Length = 286 Score = 406 bits (1044), Expect = e-111 Identities = 209/277 (75%), Positives = 230/277 (83%) Frame = -3 Query: 1115 MVGLSIGEKHFIEGGIAQDIRTDGRKRLIYRPIQVQTGVIPQANGSARVRMGGTEVIASV 936 MVGLS+GE HFI+GGIAQD+R DGRKRL YRPI V+TGVIPQ NGSARVRMG T+VIASV Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60 Query: 935 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXLQICLLGGKSGAGA 756 KAELG+PS LQPDKGKV I VDCS TA P FEGR LQ CLLGGKSGAGA Sbjct: 61 KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120 Query: 755 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVNVAAGASSD 576 GIDLSSL +V GKICWDLYIDGLVVS AIKAALSNTGIP+V VAAG S+D Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180 Query: 575 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMNSAISMSVNRRGNLC 396 E PEVD+SDEEFLQFDTS VPVI+TLTKVGRHYIVDAT EEES M+SA+S+SVNR+G++C Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240 Query: 395 GLTKRGSSGLDPSVLLDMISVGKHVSEQLMNKLDSEI 285 G+TKRG GLDPS++LDMISV KHVSEQL+NKLDSEI Sbjct: 241 GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEI 277 >ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera] gi|296082105|emb|CBI21110.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 405 bits (1040), Expect = e-110 Identities = 208/277 (75%), Positives = 231/277 (83%) Frame = -3 Query: 1115 MVGLSIGEKHFIEGGIAQDIRTDGRKRLIYRPIQVQTGVIPQANGSARVRMGGTEVIASV 936 MVGLS+GEKHFI+GGIAQD+RTDGR+RL YRP V+TGVIPQANGSARVR+GGT+VIASV Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60 Query: 935 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXLQICLLGGKSGAGA 756 KAELG+PS QPDKGKV I VDCSPTAAP+FEGR LQ CLLGGKSGAGA Sbjct: 61 KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120 Query: 755 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVNVAAGASSD 576 GIDLSSL +V GK+CWDLYIDGLVVS AIKAAL+NTGIPKV VA GAS D Sbjct: 121 GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180 Query: 575 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMNSAISMSVNRRGNLC 396 PEVDISD+E+LQFDTS VPVI+TLTKVGRHYIVDAT EEES M+SA+S+SV+ +G +C Sbjct: 181 GLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVSGQGRIC 240 Query: 395 GLTKRGSSGLDPSVLLDMISVGKHVSEQLMNKLDSEI 285 GL KRG +GLDPSV+LDMISV KHVSEQLMNKLDSEI Sbjct: 241 GLIKRGGAGLDPSVILDMISVAKHVSEQLMNKLDSEI 277 >ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max] Length = 286 Score = 402 bits (1034), Expect = e-110 Identities = 206/277 (74%), Positives = 228/277 (82%) Frame = -3 Query: 1115 MVGLSIGEKHFIEGGIAQDIRTDGRKRLIYRPIQVQTGVIPQANGSARVRMGGTEVIASV 936 MVGLS+GE HFI+GGIAQD+R DGRKRL YRPI V+TGVIPQ NGSARVRMG T+VIASV Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60 Query: 935 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXLQICLLGGKSGAGA 756 KAELG+PS LQPDKGKV I +DCS TA P FEGR LQ CLLGGKSG GA Sbjct: 61 KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA 120 Query: 755 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVNVAAGASSD 576 GIDLSSL +V GKICWDLYIDGLVVS AIKAALSNTGIP+V VAAG S+D Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND 180 Query: 575 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMNSAISMSVNRRGNLC 396 E PEVD+SDEEFLQFDTS VPVI+TLTKVGRHYIVDAT EEES M+S +S+SVNR+G++C Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240 Query: 395 GLTKRGSSGLDPSVLLDMISVGKHVSEQLMNKLDSEI 285 G+TKRG GLDPS++LDMISV KHVSEQL+NKLDSEI Sbjct: 241 GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEI 277 >ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1| predicted protein [Populus trichocarpa] Length = 287 Score = 402 bits (1034), Expect = e-110 Identities = 203/277 (73%), Positives = 233/277 (84%) Frame = -3 Query: 1115 MVGLSIGEKHFIEGGIAQDIRTDGRKRLIYRPIQVQTGVIPQANGSARVRMGGTEVIASV 936 MVGLS+GEKHFI+GGI Q++R+DGRKR YRPI ++TGVIPQANGSAR+R+G TEVIASV Sbjct: 1 MVGLSLGEKHFIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASV 60 Query: 935 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXLQICLLGGKSGAGA 756 KAELGRP++LQPDKGKV I VDCSP A P+FEGR LQ CLLGGKSGAGA Sbjct: 61 KAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLLGGKSGAGA 120 Query: 755 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVNVAAGASSD 576 GIDLSSL + GKICWDLYIDGLV+S AIKAALSNTGIP+V VAAGAS D Sbjct: 121 GIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180 Query: 575 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMNSAISMSVNRRGNLC 396 EQPEVDISDEEF+QFDTS VPVI+TLTKVGRHYIVDAT EEES M+SA+S+S++R+G +C Sbjct: 181 EQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSISRKGQIC 240 Query: 395 GLTKRGSSGLDPSVLLDMISVGKHVSEQLMNKLDSEI 285 GL+KRGS+GLDPSV+ DMISV +H+SEQL+NKLDSEI Sbjct: 241 GLSKRGSAGLDPSVISDMISVARHISEQLINKLDSEI 277 >ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328387|gb|EFH58806.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 287 Score = 399 bits (1026), Expect = e-109 Identities = 202/277 (72%), Positives = 232/277 (83%) Frame = -3 Query: 1115 MVGLSIGEKHFIEGGIAQDIRTDGRKRLIYRPIQVQTGVIPQANGSARVRMGGTEVIASV 936 MVGLS+GE+HF++GGIAQD+RTDGRKRL YRPI V+TGVIPQANGSARV++GGT+VIASV Sbjct: 1 MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60 Query: 935 KAELGRPSSLQPDKGKVFINVDCSPTAAPIFEGRXXXXXXXXXXXXLQICLLGGKSGAGA 756 KAE+GRPSSLQPDKGKV + +DCSPTA P F GR LQ CLLGGKSGAGA Sbjct: 61 KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120 Query: 755 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVNVAAGASSD 576 GI+LSSL I GK+CWDLYIDGLV+S AIKAAL+NT IPKVNV+A + D Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180 Query: 575 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMNSAISMSVNRRGNLC 396 EQPE+DISDEE+LQFDTS+VPVI+TLTKVG HYIVDAT EEES M+SA+S+SVNR G++C Sbjct: 181 EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240 Query: 395 GLTKRGSSGLDPSVLLDMISVGKHVSEQLMNKLDSEI 285 GLTKRG SGLDPSV+LDMISV KHV+E LM+KLDSEI Sbjct: 241 GLTKRGGSGLDPSVILDMISVAKHVTENLMSKLDSEI 277