BLASTX nr result
ID: Cnidium21_contig00022144
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00022144 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric... 234 4e-60 ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin... 232 3e-59 ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin... 229 2e-58 ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin... 229 2e-58 ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2... 229 2e-58 >ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis] gi|223549969|gb|EEF51456.1| F-box and wd40 domain protein, putative [Ricinus communis] Length = 445 Score = 234 bits (598), Expect = 4e-60 Identities = 109/129 (84%), Positives = 118/129 (91%) Frame = -3 Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212 GNDLLFAGTQDG IL WKYNA NFEPAA L GH +AVV+LVVGAN+LYSGSMD+SIRV Sbjct: 248 GNDLLFAGTQDGAILVWKYNAATFNFEPAASLPGHTVAVVSLVVGANRLYSGSMDHSIRV 307 Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32 WNLETLQC+QTLTDHTSVVMSVLCWDQFLLSCSLD+ IKVW AT+SGNL+VTYTH EEHG Sbjct: 308 WNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTYTHNEEHG 367 Query: 31 VLTLCGMHD 5 +LTLCGMHD Sbjct: 368 LLTLCGMHD 376 >ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like [Glycine max] Length = 427 Score = 232 bits (591), Expect = 3e-59 Identities = 106/129 (82%), Positives = 120/129 (93%) Frame = -3 Query: 388 NDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRVW 209 ND+LFAGTQDG+ILAWK+N N FEPAA LKGH+ VV+LVVGAN+LYSGSMDN+IRVW Sbjct: 230 NDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVW 289 Query: 208 NLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHGV 29 NLETLQC+QTLT+HTSVVMSVLCWDQFLLSCSLDKT+KVW AT+SGNLEVTYTH EE+G+ Sbjct: 290 NLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGI 349 Query: 28 LTLCGMHDA 2 LTLCGMHD+ Sbjct: 350 LTLCGMHDS 358 >ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like [Glycine max] Length = 426 Score = 229 bits (584), Expect = 2e-58 Identities = 104/129 (80%), Positives = 120/129 (93%) Frame = -3 Query: 388 NDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRVW 209 ND+LFAGTQDG+ILAWK+N N FEPAA LKGH+ VV+LVVGAN+LYSGSMDN+I+VW Sbjct: 229 NDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIKVW 288 Query: 208 NLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHGV 29 NLETLQC+QTLT+HTSVVMSVLCWDQFLLSCSLDKT+KVW AT+SGNLEVTY+H EE+G+ Sbjct: 289 NLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYSHNEENGI 348 Query: 28 LTLCGMHDA 2 LTLCGMHD+ Sbjct: 349 LTLCGMHDS 357 >ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis vinifera] gi|297741123|emb|CBI31854.3| unnamed protein product [Vitis vinifera] Length = 442 Score = 229 bits (584), Expect = 2e-58 Identities = 107/129 (82%), Positives = 117/129 (90%) Frame = -3 Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212 GNDLLFAG QDG ILAWK+NAV+N FEPAA LKGH +V+TLVVGAN+LYSGSMD SIRV Sbjct: 245 GNDLLFAGVQDGAILAWKFNAVSNCFEPAASLKGHTQSVITLVVGANRLYSGSMDRSIRV 304 Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32 WNLE LQC+QTLT+HTSVVMS+LCWDQFLLSCSLD T+KVWVAT+SGNLEVTYTH EE G Sbjct: 305 WNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLEVTYTHNEEQG 364 Query: 31 VLTLCGMHD 5 VL LCGMHD Sbjct: 365 VLYLCGMHD 373 >ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1| predicted protein [Populus trichocarpa] Length = 452 Score = 229 bits (583), Expect = 2e-58 Identities = 105/129 (81%), Positives = 119/129 (92%) Frame = -3 Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212 GNDLLFAGTQDG+IL WK+NA NFEPA LK H +AVV+LVVGAN+LYSGSMD+SI+V Sbjct: 255 GNDLLFAGTQDGSILVWKFNAATYNFEPAVSLKDHKMAVVSLVVGANRLYSGSMDHSIKV 314 Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32 W+LETLQCIQTLTDHTSVVMS+LCW+QFLLSCSLD+TIKVW AT+SGNLEVT+TH EEHG Sbjct: 315 WSLETLQCIQTLTDHTSVVMSLLCWEQFLLSCSLDQTIKVWAATESGNLEVTFTHNEEHG 374 Query: 31 VLTLCGMHD 5 +LTLCGMHD Sbjct: 375 LLTLCGMHD 383