BLASTX nr result

ID: Cnidium21_contig00022144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022144
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   234   4e-60
ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin...   232   3e-59
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   229   2e-58
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...   229   2e-58
ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58

>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223549969|gb|EEF51456.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 445

 Score =  234 bits (598), Expect = 4e-60
 Identities = 109/129 (84%), Positives = 118/129 (91%)
 Frame = -3

Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212
           GNDLLFAGTQDG IL WKYNA   NFEPAA L GH +AVV+LVVGAN+LYSGSMD+SIRV
Sbjct: 248 GNDLLFAGTQDGAILVWKYNAATFNFEPAASLPGHTVAVVSLVVGANRLYSGSMDHSIRV 307

Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32
           WNLETLQC+QTLTDHTSVVMSVLCWDQFLLSCSLD+ IKVW AT+SGNL+VTYTH EEHG
Sbjct: 308 WNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTYTHNEEHG 367

Query: 31  VLTLCGMHD 5
           +LTLCGMHD
Sbjct: 368 LLTLCGMHD 376


>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 427

 Score =  232 bits (591), Expect = 3e-59
 Identities = 106/129 (82%), Positives = 120/129 (93%)
 Frame = -3

Query: 388 NDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRVW 209
           ND+LFAGTQDG+ILAWK+N   N FEPAA LKGH+  VV+LVVGAN+LYSGSMDN+IRVW
Sbjct: 230 NDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVW 289

Query: 208 NLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHGV 29
           NLETLQC+QTLT+HTSVVMSVLCWDQFLLSCSLDKT+KVW AT+SGNLEVTYTH EE+G+
Sbjct: 290 NLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGI 349

Query: 28  LTLCGMHDA 2
           LTLCGMHD+
Sbjct: 350 LTLCGMHDS 358


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 426

 Score =  229 bits (584), Expect = 2e-58
 Identities = 104/129 (80%), Positives = 120/129 (93%)
 Frame = -3

Query: 388 NDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRVW 209
           ND+LFAGTQDG+ILAWK+N   N FEPAA LKGH+  VV+LVVGAN+LYSGSMDN+I+VW
Sbjct: 229 NDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIKVW 288

Query: 208 NLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHGV 29
           NLETLQC+QTLT+HTSVVMSVLCWDQFLLSCSLDKT+KVW AT+SGNLEVTY+H EE+G+
Sbjct: 289 NLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYSHNEENGI 348

Query: 28  LTLCGMHDA 2
           LTLCGMHD+
Sbjct: 349 LTLCGMHDS 357


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
           vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/129 (82%), Positives = 117/129 (90%)
 Frame = -3

Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212
           GNDLLFAG QDG ILAWK+NAV+N FEPAA LKGH  +V+TLVVGAN+LYSGSMD SIRV
Sbjct: 245 GNDLLFAGVQDGAILAWKFNAVSNCFEPAASLKGHTQSVITLVVGANRLYSGSMDRSIRV 304

Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32
           WNLE LQC+QTLT+HTSVVMS+LCWDQFLLSCSLD T+KVWVAT+SGNLEVTYTH EE G
Sbjct: 305 WNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLEVTYTHNEEQG 364

Query: 31  VLTLCGMHD 5
           VL LCGMHD
Sbjct: 365 VLYLCGMHD 373


>ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  229 bits (583), Expect = 2e-58
 Identities = 105/129 (81%), Positives = 119/129 (92%)
 Frame = -3

Query: 391 GNDLLFAGTQDGTILAWKYNAVANNFEPAAQLKGHNLAVVTLVVGANKLYSGSMDNSIRV 212
           GNDLLFAGTQDG+IL WK+NA   NFEPA  LK H +AVV+LVVGAN+LYSGSMD+SI+V
Sbjct: 255 GNDLLFAGTQDGSILVWKFNAATYNFEPAVSLKDHKMAVVSLVVGANRLYSGSMDHSIKV 314

Query: 211 WNLETLQCIQTLTDHTSVVMSVLCWDQFLLSCSLDKTIKVWVATDSGNLEVTYTHTEEHG 32
           W+LETLQCIQTLTDHTSVVMS+LCW+QFLLSCSLD+TIKVW AT+SGNLEVT+TH EEHG
Sbjct: 315 WSLETLQCIQTLTDHTSVVMSLLCWEQFLLSCSLDQTIKVWAATESGNLEVTFTHNEEHG 374

Query: 31  VLTLCGMHD 5
           +LTLCGMHD
Sbjct: 375 LLTLCGMHD 383


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