BLASTX nr result

ID: Cnidium21_contig00022134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022134
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059971.1| Os07g0558000 [Oryza sativa Japonica Group] g...    76   6e-12
gb|EEC82263.1| hypothetical protein OsI_26459 [Oryza sativa Indi...    75   1e-11
ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003540025.1| PREDICTED: probable serine/threonine-protein...    70   3e-10
ref|XP_003562927.1| PREDICTED: probable serine/threonine-protein...    67   2e-09

>ref|NP_001059971.1| Os07g0558000 [Oryza sativa Japonica Group]
           gi|34394005|dbj|BAC84029.1| putative ubiquinone
           biosynthesis protein AarF [Oryza sativa Japonica Group]
           gi|113611507|dbj|BAF21885.1| Os07g0558000 [Oryza sativa
           Japonica Group] gi|215678826|dbj|BAG95263.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222637271|gb|EEE67403.1| hypothetical protein
           OsJ_24717 [Oryza sativa Japonica Group]
          Length = 623

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 56/139 (40%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
 Frame = -3

Query: 406 RLLAFSNFRRAAYSLLQTPKASSSQLYICR---APCAYGIPYSLSRLYSQYKVSNRRLIC 236
           RLLA    RRAAY     P   S      R         IP   SR++S YKV  R+   
Sbjct: 10  RLLAVGTNRRAAY--FSQPSHRSGYYTAARDNGLSAKRKIPTVFSRMFSHYKVIVRK--- 64

Query: 235 RMSYDVKATLQKTGGRRNLY-FLASNKISSHAQIAWKRLTHICSYSAPILPPISRIACAV 59
             + D K   + + G R     +A++  + HAQ+AWKRL+H   YS P  P ISR ACA+
Sbjct: 65  NKAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRAACAL 124

Query: 58  SLALTRSHLVAPGVLALIF 2
           S + TR H+V PGV+AL F
Sbjct: 125 SFSFTRFHVV-PGVMALAF 142


>gb|EEC82263.1| hypothetical protein OsI_26459 [Oryza sativa Indica Group]
          Length = 623

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
 Frame = -3

Query: 406 RLLAFSNFRRAAYSLLQTPKASSSQLYICR---APCAYGIPYSLSRLYSQYKVSNRRLIC 236
           RLLA    R+AAY     P   S      R         IP   SR++S YKV  R+   
Sbjct: 10  RLLAVGTNRQAAY--FSQPSHRSGYYTAARDNGLSAKRKIPIVFSRMFSHYKVIVRK--- 64

Query: 235 RMSYDVKATLQKTGGRRNLY-FLASNKISSHAQIAWKRLTHICSYSAPILPPISRIACAV 59
             + D K   + + G R     +A++  + HAQ+AWKRL+H   YS P  P ISR ACA+
Sbjct: 65  NKAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRAACAL 124

Query: 58  SLALTRSHLVAPGVLALIF 2
           S + TR H+V PGV+AL F
Sbjct: 125 SFSFTRFHVV-PGVMALAF 142


>ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|222848610|gb|EEE86157.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 54/141 (38%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
 Frame = -3

Query: 412 MSRLLAFSNFRRAAYSLLQTPKASSSQLYICR---APCAYGIPYSLSRLYSQYKVSNRRL 242
           + R L   N ++ A  +    K+SS+QL   +      + G+     R YSQY   +R  
Sbjct: 6   VGRFLTIGNIKKVARLIFSKQKSSSNQLLEVKKYGTVVSVGLHLPQFRYYSQYSFPSRGY 65

Query: 241 ICRMSYDVKATLQKTGGRR---NLYFLASNKISSHAQIAWKRLTHICSYSAPILPPISRI 71
                Y+VK       GRR   + Y   S+ ++ +AQ+AWKRL    S +    P ISRI
Sbjct: 66  SSFALYNVKEQF----GRRCFTSCYSSTSDVVTRNAQLAWKRLCRKGSANGWSFPRISRI 121

Query: 70  ACAVSLALTRSHLVAPGVLAL 8
           A AVSLALTRSHLV P  LAL
Sbjct: 122 AQAVSLALTRSHLVVPSALAL 142


>ref|XP_003540025.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 619

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
 Frame = -3

Query: 412 MSRLLAFSNFRRAAYSLLQTPKASSSQLYICRAPCAYGIPYSLSRLYSQYKVSNRRLICR 233
           MSRLLA  N RR   S+ +T      +++        G PYS    +S Y+  ++     
Sbjct: 1   MSRLLACGNIRRFTRSVHKT---GCLEVFY-----PMGSPYSRYNFFSHYRHVHKEQFLF 52

Query: 232 MSYDVKATLQKTGGRRNLYFLASNKIS-SHAQIAWKRLTHICSYSAPILPPISRIACAVS 56
           M +  K     +   RNLY L +N +   H Q+ W R+   C +  P LPP+ +IA  V+
Sbjct: 53  MLFKSKVNFLMSSRARNLYTLPANNVKYHHGQVVWNRM---CFHKGPALPPVGQIAHVVT 109

Query: 55  LALTRSHLVAPGVLALI 5
           LAL +S+ V  GV+A I
Sbjct: 110 LALVKSNFVVHGVIAFI 126


>ref|XP_003562927.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Brachypodium distachyon]
          Length = 621

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/135 (35%), Positives = 73/135 (54%)
 Frame = -3

Query: 406 RLLAFSNFRRAAYSLLQTPKASSSQLYICRAPCAYGIPYSLSRLYSQYKVSNRRLICRMS 227
           RLLA    RRA +   Q+   S     +     +   P   SR++S YKV  R  +   +
Sbjct: 10  RLLAIGTNRRATH-FPQSKHGSGYYAIVRDNGLSRKTPSVFSRMFSHYKVIVRNKVEDHN 68

Query: 226 YDVKATLQKTGGRRNLYFLASNKISSHAQIAWKRLTHICSYSAPILPPISRIACAVSLAL 47
           Y  +  + +  G  ++  L+++     AQ+A KR +H  SY+ P  P +SR ACA+SL+L
Sbjct: 69  Y--RKRISRGYGSLSVA-LSNSSARQQAQLALKRFSHKYSYTGPRFPLLSRAACAISLSL 125

Query: 46  TRSHLVAPGVLALIF 2
           TRSH++ PGV+AL F
Sbjct: 126 TRSHVI-PGVMALAF 139


Top