BLASTX nr result

ID: Cnidium21_contig00022121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022121
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    87   2e-15
ref|XP_002529689.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    66   4e-09
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    64   1e-08
ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    63   2e-08

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
 Frame = +2

Query: 65   KWRKPPDGWVKINCDATXXXXXXXXXXXXXRDSQGVFVGAQCRKIEGHWLPREAEAIGLK 244
            KW+KP  GW+KIN D               RD QG F+G   +      LP+  EA+G++
Sbjct: 663  KWQKPDYGWIKINVDGAVFPDKGAIGAVF-RDHQGRFMGGFAKPFPHQTLPKVVEALGVR 721

Query: 245  EAIAWSNTLGFKQCCFETDSQELAWAFKGKT-GKSYFHTLVLDCIQELKHVDQVLVEFVY 421
            E ++W +     +   ETD   +  A + K+   + F  +++DC+  L+H+  V V +  
Sbjct: 722  EVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYAR 781

Query: 422  RSANCVADLLAKAAHSMTGCGEWLVTPPEII 514
            RSAN  A  LA  A S T    W  TPP+ I
Sbjct: 782  RSANSAAHCLANGACSFTSLHIWGYTPPQCI 812


>ref|XP_002529689.1| conserved hypothetical protein [Ricinus communis]
           gi|223530837|gb|EEF32700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/105 (38%), Positives = 68/105 (64%)
 Frame = +2

Query: 176 VGAQCRKIEGHWLPREAEAIGLKEAIAWSNTLGFKQCCFETDSQELAWAFKGKTGKSYFH 355
           V A+  +I G++ PREAEAI ++EA++W     F++C  E+D+ ++  A K  + +S FH
Sbjct: 2   VMARADRIPGNYTPREAEAISIREALSWLKQQIFEECIIESDALQVIEALKAPSSQSCFH 61

Query: 356 TLVLDCIQELKHVDQVLVEFVYRSANCVADLLAKAAHSMTGCGEW 490
            ++ DC   ++H  QV  +FV RSAN  A ++A+ A+S++G  +W
Sbjct: 62  LIIDDCKHLVQHFRQVHFQFVRRSANTAAQIVARGAYSLSGPMDW 106


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
 Frame = +2

Query: 77  PPDGWVKINCD-ATXXXXXXXXXXXXXRDSQGVFVGAQCRKIEGHWLPREAEAIGLKEAI 253
           P  G+VK N D A              RDS G FV        G +  + AEAIGL+EA+
Sbjct: 171 PQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAV 230

Query: 254 AWSNTLGFKQCCFETDSQELAWA-FKGKTGKSYFHTLVLDCIQELKHVDQVLVEFVYRSA 430
            W  +LG     FE D++ +  A   G      F  ++ DC   L+H     V+F+ + A
Sbjct: 231 QWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQA 290

Query: 431 NCVADLLAKAAHSMTGCGEWLVTPPEIISHVL 526
           N VA  LA+A+H   G   + V PP+ I +++
Sbjct: 291 NLVAHSLARASHLQDGFNMFSV-PPDCIRNLV 321


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
 Frame = +2

Query: 65   KWRKPPDGWVKINCDATXXXXXXXXXXXXXRDSQGVFVGAQCRKIEGHWLPREAEAIGLK 244
            KW+KP  GW+ IN D                                  L    EA+G++
Sbjct: 1661 KWQKPDYGWIXINVDGAPFPHQT--------------------------LXEVVEALGVR 1694

Query: 245  EAIAWSNTLGFKQCCFETDSQELAWAFKGKTGKSY-FHTLVLDCIQELKHVDQVLVEFVY 421
            E ++W +     +   ETD   +  A + K+  +  F  ++ DC+  L+H+  V V +  
Sbjct: 1695 EVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLVDVQVVYAR 1754

Query: 422  RSANCVADLLAKAAHSMTGCGEWLVTPPEII 514
            RSAN  A  LAK A S T    W  TPP+ I
Sbjct: 1755 RSANSAAHCLAKGAGSFTSLHIWGYTPPQCI 1785


>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
 Frame = +2

Query: 158 DSQGVFVGAQCRKIEGHWLPREAEAIGLKEAIAWSNTLGFKQCCFETDSQELAWAFKGKT 337
           DS G FV      + G + PR AEA+ LKEAI W+  + F    FE+DS+    A +   
Sbjct: 93  DSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSLVVFESDSKIAVDAIRSLA 152

Query: 338 GK-SYFHTLVLDCIQELKHVDQVLVEFVYRSANCVADLLAKAAHSMTGCGEWLVTP 502
              S F  ++ +C   L       V FV R AN VA +LA +++S      W V P
Sbjct: 153 ADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHVLAMSSYSYASLATWNVIP 208


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