BLASTX nr result

ID: Cnidium21_contig00022114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022114
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   135   4e-30
ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30

>ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|222865115|gb|EEF02246.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = -1

Query: 458 IFHKVISSVQLAGKLEIPENTSFFNAVIFACAKADDLMEMERVFKRMKDKECKPNSMTFT 279
           +FHKVISSVQLA K EIPENTSFFNAVI ACAKADDLMEMERVFKRMKDK+C P+S T++
Sbjct: 349 LFHKVISSVQLAAKFEIPENTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYS 408

Query: 278 LMMEAYRKEGMTDKAYDLELEKQ 210
           +M+EAYRKEGM DK Y LE EKQ
Sbjct: 409 IMVEAYRKEGMNDKIYYLEQEKQ 431


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
 Frame = -1

Query: 458 IFHKVISSVQLAGKLEIPENTSFFNAVIFACAKADDLMEMERVFKRMKDKECKPNSMTFT 279
           +FHKV+SSVQLAGK EIPENTSF+NAVI ACAKA+DL+EMERVF RMKDK C+P+S T++
Sbjct: 406 LFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYS 465

Query: 278 LMMEAYRKEGMTDKAYDLELEKQ--ILDG 198
           +M+EAY+KEGM DK YDLE E+Q  + DG
Sbjct: 466 IMVEAYKKEGMNDKIYDLEQERQRMVADG 494


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/83 (74%), Positives = 75/83 (90%)
 Frame = -1

Query: 458 IFHKVISSVQLAGKLEIPENTSFFNAVIFACAKADDLMEMERVFKRMKDKECKPNSMTFT 279
           +FHKV+SSVQLAGK EIPENTSF+NAVI ACAKA+DL+EMERVF RMKDK C+P+S T++
Sbjct: 406 LFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYS 465

Query: 278 LMMEAYRKEGMTDKAYDLELEKQ 210
           +M+EAY+KEGM DK YDLE E+Q
Sbjct: 466 IMVEAYKKEGMNDKIYDLEQERQ 488


>ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/94 (68%), Positives = 78/94 (82%)
 Frame = -1

Query: 458 IFHKVISSVQLAGKLEIPENTSFFNAVIFACAKADDLMEMERVFKRMKDKECKPNSMTFT 279
           +FHKVISSV+LAGKLEIPEN +F+NAV+ ACAKA+DLMEMERVFKRMKD +C+P+  T+T
Sbjct: 388 LFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYT 447

Query: 278 LMMEAYRKEGMTDKAYDLELEKQILDGSDLKEDE 177
           +M+EAYRKEGM DK Y LE EKQ +   D K  +
Sbjct: 448 IMIEAYRKEGMNDKIYYLEQEKQTMMTDDKKASQ 481


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/91 (70%), Positives = 77/91 (84%)
 Frame = -1

Query: 458 IFHKVISSVQLAGKLEIPENTSFFNAVIFACAKADDLMEMERVFKRMKDKECKPNSMTFT 279
           +FHKVISSV+LAGKLEIPEN +F+NAV+ ACAKA+DLMEMERVFKRMKD +C+P+  T+T
Sbjct: 388 LFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYT 447

Query: 278 LMMEAYRKEGMTDKAYDLELEKQILDGSDLK 186
           +M+EAYRKEGM DK Y LE EKQ +   D K
Sbjct: 448 IMIEAYRKEGMNDKIYYLEQEKQTMMTDDKK 478


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