BLASTX nr result

ID: Cnidium21_contig00022102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022102
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    99   1e-31
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    94   2e-31
emb|CBI35950.3| unnamed protein product [Vitis vinifera]               94   4e-30
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    94   6e-30
ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group] g...    91   1e-29

>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score = 99.0 bits (245), Expect(2) = 1e-31
 Identities = 45/48 (93%), Positives = 47/48 (97%)
 Frame = +3

Query: 255 PQSSGKSTLLNHLFHTNFREMDAYKGRSQTTKGIWMARCAGIEPCTIV 398
           PQSSGKSTLLNHLF TNFREMDA+KGRSQTTKGIWMARCAGIEPCT+V
Sbjct: 48  PQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLV 95



 Score = 62.8 bits (151), Expect(2) = 1e-31
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 128 LKDSEDCFSTHLIDGDGTFNSSGLEAFMKTVKMSECGLSYAV 253
           + +SE C ST LIDGDGTFN  G+E FMK VK++ECGLSYAV
Sbjct: 1   MANSETCCSTQLIDGDGTFNVFGVENFMKEVKLAECGLSYAV 42


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score = 93.6 bits (231), Expect(2) = 2e-31
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +3

Query: 255 PQSSGKSTLLNHLFHTNFREMDAYKGRSQTTKGIWMARCAGIEPCTIV 398
           PQSSGKSTLLN+LF TNFREMDA+KGRSQTTKGIWMARCA IEPCT+V
Sbjct: 48  PQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLV 95



 Score = 67.4 bits (163), Expect(2) = 2e-31
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +2

Query: 128 LKDSEDCFSTHLIDGDGTFNSSGLEAFMKTVKMSECGLSYAV 253
           + +SE C ST LIDGDGTFN SGLE+FMK VK++ECGLSYAV
Sbjct: 1   MANSETCCSTQLIDGDGTFNVSGLESFMKEVKLAECGLSYAV 42


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 94.0 bits (232), Expect(2) = 4e-30
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +3

Query: 255 PQSSGKSTLLNHLFHTNFREMDAYKGRSQTTKGIWMARCAGIEPCTIV 398
           PQSSGKSTLLNHLF TNFREMDA++GRSQTTKGIW+ARCA IEPCT+V
Sbjct: 264 PQSSGKSTLLNHLFGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLV 311



 Score = 62.4 bits (150), Expect(2) = 4e-30
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +2

Query: 125 KLKDSEDCFSTHLIDGDGTFNSSGLEAFMKTVKMSECGLSYAV 253
           K+ ++++C ST LIDGDG FN  GLE FMK VK++ECGLSYAV
Sbjct: 216 KMGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAV 258


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score = 94.0 bits (232), Expect(2) = 6e-30
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +3

Query: 255 PQSSGKSTLLNHLFHTNFREMDAYKGRSQTTKGIWMARCAGIEPCTIV 398
           PQSSGKSTLLNHLF TNFREMDA++GRSQTTKGIW+ARCA IEPCT+V
Sbjct: 106 PQSSGKSTLLNHLFGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLV 153



 Score = 62.0 bits (149), Expect(2) = 6e-30
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +2

Query: 110 NIACFKLKDSEDCFSTHLIDGDGTFNSSGLEAFMKTVKMSECGLSYAV 253
           N+    + ++++C ST LIDGDG FN  GLE FMK VK++ECGLSYAV
Sbjct: 53  NVDRHTISNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAV 100


>ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group]
           gi|122228672|sp|Q0JLS6.1|RHD3_ORYSJ RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3; AltName:
           Full=Protein SEY1 homolog 1 gi|113532919|dbj|BAF05302.1|
           Os01g0575000 [Oryza sativa Japonica Group]
          Length = 806

 Score = 90.5 bits (223), Expect(2) = 1e-29
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3

Query: 255 PQSSGKSTLLNHLFHTNFREMDAYKGRSQTTKGIWMARCAGIEPCTIV 398
           PQSSGKSTLLNHLF TNFREMDA+KGRSQTTKGIWMA+   IEPCT+V
Sbjct: 45  PQSSGKSTLLNHLFRTNFREMDAFKGRSQTTKGIWMAKAHNIEPCTLV 92



 Score = 64.3 bits (155), Expect(2) = 1e-29
 Identities = 30/36 (83%), Positives = 30/36 (83%)
 Frame = +2

Query: 146 CFSTHLIDGDGTFNSSGLEAFMKTVKMSECGLSYAV 253
           CFST LIDGDG FN SGLE FMK VKM ECGLSYAV
Sbjct: 4   CFSTQLIDGDGVFNVSGLENFMKEVKMGECGLSYAV 39


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