BLASTX nr result

ID: Cnidium21_contig00022084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022084
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         230   2e-58
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   200   1e-49
emb|CBI30649.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   199   3e-49
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...   199   3e-49

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  230 bits (586), Expect = 2e-58
 Identities = 105/175 (60%), Positives = 137/175 (78%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3    LTVERLEPKVEDIEWLRKTNATVGCDGGSFVKDYLRNVLKLENIKSMDNQFDYTSQFDKG 182
            LTV RLEP V+DI W+++TNATVGCDG SFVKDYLR VL+L+NIK++ NQ DY  + + G
Sbjct: 654  LTVPRLEPSVKDIGWIKRTNATVGCDGDSFVKDYLRQVLELQNIKNISNQDDYPKELENG 713

Query: 183  DISASFVELPYQRFFLQDNCNHFTTVGPTYRLGGFAFVFQKGSPIAKDVSEAILTITENG 362
            +I A+F+E+PYQ+ FL+++CN +   GP YR GG AF FQKGSP+A+DVSEAILT+T++G
Sbjct: 714  NIKAAFLEIPYQKIFLREHCNQYVVAGPNYRFGGLAFAFQKGSPLARDVSEAILTLTQDG 773

Query: 363  TLKRLETKWFPLATNCSALRNTG---SLTIESFWGIYLISGATSTVCFLIFIAKL 518
            TL RLE  WF L+ NC  +  TG   SLT+ SFWG+YL+SGATST+C L ++  L
Sbjct: 774  TLNRLEEHWFALSKNCDNVDPTGETESLTLGSFWGLYLVSGATSTLCLLFYVYHL 828


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 931

 Score =  200 bits (509), Expect = 1e-49
 Identities = 97/179 (54%), Positives = 132/179 (73%), Gaps = 6/179 (3%)
 Frame = +3

Query: 3    LTVERLEPKVEDIEWLRKTNATVGCDGGSFVKDYLRNVL--KLENIKSMDNQFDYTSQFD 176
            LTV RL+P V DIEWL++ +  VGCDG SFV++YL+NVL  K ENIK++ +++ Y  +F+
Sbjct: 656  LTVRRLQPNVTDIEWLKRNSLKVGCDGDSFVRNYLQNVLGFKQENIKNVSSEYSYEGEFE 715

Query: 177  KGDISASFVELPYQRFFLQDNCNHFTTVGPTYRLGGFAFVFQKGSPIAKDVSEAILTITE 356
               ISA+F+ELPY++ F+   C  ++   PTYR GG  FVFQKGSPIA DVS+AIL ++E
Sbjct: 716  SATISAAFLELPYEKVFIGHYCKRYSATTPTYRFGGLGFVFQKGSPIAADVSKAILNLSE 775

Query: 357  NGTLKRLETKWFPLATNC--SALRN--TGSLTIESFWGIYLISGATSTVCFLIFIAKLL 521
            +G LK LE KWF  +  C  +A  N  T SL+++SFWGIY+I+GATST+CFL+F+  LL
Sbjct: 776  DGELKNLEEKWFAQSRQCFSNATDNDKTESLSLQSFWGIYIITGATSTICFLLFLFHLL 834


>emb|CBI30649.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  199 bits (506), Expect = 3e-49
 Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
 Frame = +3

Query: 3    LTVERLEPKVEDIEWLRKTNATVGCDGGSFVKDYLRNVL--KLENIKSMDNQFDYTSQFD 176
            LTV+RLEP V DIEWL+     VGCDG SFV+ YL +VL  K +NIK++ +Q+ Y ++F 
Sbjct: 675  LTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISSQYAYPNEFQ 734

Query: 177  KGDISASFVELPYQRFFLQDNCNHFTTVGPTYRLGGFAFVFQKGSPIAKDVSEAILTITE 356
            KG ISA+F+ELPY++ F+   C  +T   P  R GG  FVFQKGSPIA DVS+AILT++E
Sbjct: 735  KGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFVFQKGSPIAADVSKAILTLSE 794

Query: 357  NGTLKRLETKWFPLATNCSALRNTGSLTIESFWGIYLISGATSTVCFLIFIAKLLVLRKI 536
             G L+ LE KWFP +  CS   +T  L++++FW +Y++ GATST+CFL+F+ +LL+  K 
Sbjct: 795  RGILQSLEDKWFPSSDECST-TDTTELSLQNFWALYVLCGATSTICFLLFLCRLLL--KY 851

Query: 537  KDQNPRNEGA 566
              QN  +E A
Sbjct: 852  FQQNAPSESA 861


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  199 bits (506), Expect = 3e-49
 Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
 Frame = +3

Query: 3    LTVERLEPKVEDIEWLRKTNATVGCDGGSFVKDYLRNVL--KLENIKSMDNQFDYTSQFD 176
            LTV+RLEP V DIEWL+     VGCDG SFV+ YL +VL  K +NIK++ +Q+ Y ++F 
Sbjct: 667  LTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISSQYAYPNEFQ 726

Query: 177  KGDISASFVELPYQRFFLQDNCNHFTTVGPTYRLGGFAFVFQKGSPIAKDVSEAILTITE 356
            KG ISA+F+ELPY++ F+   C  +T   P  R GG  FVFQKGSPIA DVS+AILT++E
Sbjct: 727  KGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFVFQKGSPIAADVSKAILTLSE 786

Query: 357  NGTLKRLETKWFPLATNCSALRNTGSLTIESFWGIYLISGATSTVCFLIFIAKLLVLRKI 536
             G L+ LE KWFP +  CS   +T  L++++FW +Y++ GATST+CFL+F+ +LL+  K 
Sbjct: 787  RGILQSLEDKWFPSSDECST-TDTTELSLQNFWALYVLCGATSTICFLLFLCRLLL--KY 843

Query: 537  KDQNPRNEGA 566
              QN  +E A
Sbjct: 844  FQQNAPSESA 853


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 843

 Score =  199 bits (506), Expect = 3e-49
 Identities = 93/178 (52%), Positives = 131/178 (73%), Gaps = 5/178 (2%)
 Frame = +3

Query: 3    LTVERLEPKVEDIEWLRKTNATVGCDGGSFVKDYLRNVLKL--ENIKSMDNQFDYTSQFD 176
            LT++RL+P V DIEWL++ N  VGCDG SFV+ YL NVL+   ENIK++ +++ Y  +F 
Sbjct: 597  LTIQRLQPNVTDIEWLKRNNLPVGCDGDSFVRKYLENVLQFRPENIKNVSSEYSYPGEFQ 656

Query: 177  KGDISASFVELPYQRFFLQDNCNHFTTVGPTYRLGGFAFVFQKGSPIAKDVSEAILTITE 356
            K  I A+F+ELPYQ+ F+   C ++    PT+R GG  F FQKGSPIA DVS+AIL ++E
Sbjct: 657  KKTIYAAFLELPYQKVFMNHYCKNYIANTPTHRFGGLGFAFQKGSPIAADVSKAILKLSE 716

Query: 357  NGTLKRLETKWFPLATNCSALRNTG---SLTIESFWGIYLISGATSTVCFLIFIAKLL 521
            +G+LK+LE KWF  ++ C++  N     SL++++FWG+YLISGATST+CFL+F+  LL
Sbjct: 717  DGSLKKLEDKWFTPSSQCASNANDNRNESLSLQNFWGLYLISGATSTICFLLFLIHLL 774


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