BLASTX nr result

ID: Cnidium21_contig00022079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022079
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...    69   2e-09
emb|CBI30590.3| unnamed protein product [Vitis vinifera]               64   1e-07
ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...    59   2e-06

>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 83/259 (32%), Positives = 104/259 (40%), Gaps = 57/259 (22%)
 Frame = -1

Query: 1220 GCRKNKRVKKAXXXXXXXXXXXXSLSAPAVTTTSTNP-----SASLSRIDRLVYGLHXXX 1056
            GCRKNKRVK+               SAP        P     SAS + +  L YGL    
Sbjct: 66   GCRKNKRVKRPASSVDAPS------SAPTAALNPPPPSQIDLSASSNHVTPLFYGL--PS 117

Query: 1055 XXSDVNLSFQRFNSMA---DTAPIYDYNLQQNLLGFS-SSGLMAN--------------- 933
              S++NL F RFNS A   DT   YD   Q   LG   SSG++AN               
Sbjct: 118  NPSELNLPFPRFNSRASNEDTVSGYDLQPQLGALGLGFSSGIIANDTRTDDYRNGFNPAK 177

Query: 932  ---DITTSKSFLSNYVXXXXXXXXXXXXXXXSTMASLFTTS----SFNLEPEKSISPQNN 774
               D+ TS S LSNY                 TMASL  +S     F     K     N+
Sbjct: 178  QIQDLVTSSSLLSNY-----SIFGSSSSTTTPTMASLINSSLQQQKFMNGDLKESRGANH 232

Query: 773  FFGIIPNYSDMQMQGNSNKYVMEA-----------------------SSNDPN---SLFS 672
            F  ++P Y D+Q+ GN++  + E                         S+DP+   +L S
Sbjct: 233  FQPLVP-YEDLQISGNTSMAMKEVKSEHGHNTLEWNSVPCQNQIEQIGSSDPSLYWNLTS 291

Query: 671  VGASWFDPANFGSSVPSLI 615
            +GA W D  N GSSV SLI
Sbjct: 292  LGA-WSDLPNMGSSVTSLI 309


>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 74/232 (31%), Positives = 96/232 (41%), Gaps = 30/232 (12%)
 Frame = -1

Query: 1220 GCRKNKRVKKAXXXXXXXXXXXXSLSAPAVTTTSTNP-----SASLSRIDRLVYGLHXXX 1056
            GCRKNKRVK+               SAP        P     SAS + +  L YGL    
Sbjct: 158  GCRKNKRVKRPASSVDAPS------SAPTAALNPPPPSQIDLSASSNHVTPLFYGL--PS 209

Query: 1055 XXSDVNLSFQRFNSMA---DTAPIYDYNLQQNLLGFS-SSGLMAN--------------- 933
              S++NL F RFNS A   DT   YD   Q   LG   SSG++AN               
Sbjct: 210  NPSELNLPFPRFNSRASNEDTVSGYDLQPQLGALGLGFSSGIIANDTRTDDYRNGFNPAK 269

Query: 932  ---DITTSKSFLSNYVXXXXXXXXXXXXXXXSTMASLFTTSSFNLEPEKSISPQNNFFGI 762
               D+ TS S LSNY                 TMASL  +S   L+ +K ++        
Sbjct: 270  QIQDLVTSSSLLSNY-----SIFGSSSSTTTPTMASLINSS---LQQQKFMNGDLKESRG 321

Query: 761  IPNYSDMQMQGNSNKYVMEASSNDPN---SLFSVGASWFDPANFGSSVPSLI 615
              ++  +         + +  S+DP+   +L S+GA W D  N GSSV SLI
Sbjct: 322  ANHFQPLWNSVPCQNQIEQIGSSDPSLYWNLTSLGA-WSDLPNMGSSVTSLI 372


>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
            gi|222870889|gb|EEF08020.1| f-box family protein [Populus
            trichocarpa]
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 74/256 (28%), Positives = 105/256 (41%), Gaps = 58/256 (22%)
 Frame = -1

Query: 1220 GCRKNKRVKKAXXXXXXXXXXXXSLSAPAVTTTSTNP-------SASLSRIDRLVYGLHX 1062
            GCRKNKRVK+               ++ +V++ + NP       S++ + I+ L YGL  
Sbjct: 77   GCRKNKRVKRPASAAEG--------ASNSVSSANPNPQTPIDHISSTSNHINPLFYGLSG 128

Query: 1061 XXXXSDVNLSFQ-RFNSMADTAPIYDYNLQQNL----LGFSSSGLMAND----------- 930
                 ++NL F  RFN   D+A    ++LQ  L    LGFSS  +  ND           
Sbjct: 129  SNPS-EMNLPFPGRFNPRMDSAVSGYHDLQPQLNALALGFSSGIMTTNDANGFNPTKQIQ 187

Query: 929  -ITTSKSFLSNYVXXXXXXXXXXXXXXXSTMASLFTTSSFNLEP------EKSISPQNNF 771
             + TS S LS+Y                 T+ASL   SSFN +       ++S    N F
Sbjct: 188  DVVTSNSLLSSY-SNLFGSSTTSTNTTSPTIASLLA-SSFNQQKFTNSGIKESTRAPNYF 245

Query: 770  FGIIPNYSDMQMQGNSNK------------------------YVMEASSNDP----NSLF 675
              +   + ++QM GNS                           + +   +DP    N+  
Sbjct: 246  QSLTVPFKELQMNGNSESGIGMKGVKTEHNQNRLDWNVPCQNQIEQVGLSDPSMYWNTNT 305

Query: 674  SVGASWFDPANFGSSV 627
            SVG SW DPAN GSSV
Sbjct: 306  SVG-SWHDPANMGSSV 320


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