BLASTX nr result

ID: Cnidium21_contig00022077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022077
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    72   1e-10
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    71   2e-10
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    71   2e-10
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    69   7e-10

>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/96 (35%), Positives = 53/96 (55%)
 Frame = -3

Query: 678 HCPGSRTDMWVMNNNGVETSWSKLLSLEQPGILGSFDFVYPVAFSKAQNEILLVVDDNKL 499
           +C     D+WVM   GV+ SW KL S      + +  F+ P+ +SK + ++LL V+D+KL
Sbjct: 280 NCGHECIDLWVMEEYGVKESWIKLFSFRLSKSMSNLMFLRPLCYSKDREKMLLEVNDHKL 339

Query: 498 VWYDRETNKVKNIELHGFPESFDLLVCNESRFQISD 391
           VWYD     V+ +++ G P SF   +C  S   + D
Sbjct: 340 VWYDWNKTSVRTVKVKGGPRSFGAAMCVGSLVPLDD 375


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 34/89 (38%), Positives = 51/89 (57%)
 Frame = -3

Query: 663 RTDMWVMNNNGVETSWSKLLSLEQPGILGSFDFVYPVAFSKAQNEILLVVDDNKLVWYDR 484
           R ++WVM   GV+ SW KLL++ Q   +GS   V P+ +SK   ++LL+ +  KL+WYD 
Sbjct: 69  RFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLHNRRKLIWYDL 128

Query: 483 ETNKVKNIELHGFPESFDLLVCNESRFQI 397
           +T  V +  + G P SFD     ES   +
Sbjct: 129 DTQTVHDAVIDGLPHSFDAETLVESLISV 157


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/102 (33%), Positives = 59/102 (57%)
 Frame = -3

Query: 687 LIDHCPGSRTDMWVMNNNGVETSWSKLLSLEQPGILGSFDFVYPVAFSKAQNEILLVVDD 508
           L+ +    R D+WVM    V+ SWSKL S+ +  ++G    + P+A+SK+ NE+L+  D+
Sbjct: 259 LLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDN 318

Query: 507 NKLVWYDRETNKVKNIELHGFPESFDLLVCNESRFQISDSEL 382
             L WYD +  +V N+ + G P +F+  +C  S   ++ + L
Sbjct: 319 VNLFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVPLNANRL 360


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/91 (36%), Positives = 56/91 (61%)
 Frame = -3

Query: 657 DMWVMNNNGVETSWSKLLSLEQPGILGSFDFVYPVAFSKAQNEILLVVDDNKLVWYDRET 478
           D+WVM   G++ SW K+ S++    +G+F F+ P+ +SK   ++LL V+D KLVWYD + 
Sbjct: 293 DVWVMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKN 352

Query: 477 NKVKNIELHGFPESFDLLVCNESRFQISDSE 385
              K +++ G P S+   +  ES  +I+D +
Sbjct: 353 KHAKVVKIRGGPNSYGSEMYVESLVRINDGD 383


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = -3

Query: 669 GSRTDMWVMNNNGVETSWSKLLSLEQPGILGSFDFVYPVAFSKAQNEILLVVDDNKLVWY 490
           G R D+W+M   GV+ SW+KL S+ Q  ++G    + P+A+SK+ +E+L+  D+  L WY
Sbjct: 272 GERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWY 331

Query: 489 DRETNKVKNIELHGFPESFDLLVCNESRFQIS 394
           D +  +VKN  + G P SF+     ES   +S
Sbjct: 332 DLKRKQVKN-RIPGIPYSFEADTFVESLISVS 362


Top