BLASTX nr result

ID: Cnidium21_contig00022045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022045
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173424.1| hypothetical protein NitaMp082 [Nicotiana tabac...   106   2e-26
gb|AFR34339.1| hypothetical protein GlmaxMp13 (mitochondrion) [G...   115   2e-23
ref|XP_002535171.1| conserved hypothetical protein [Ricinus comm...    68   3e-09

>ref|YP_173424.1| hypothetical protein NitaMp082 [Nicotiana tabacum]
           gi|56806588|dbj|BAD83489.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 101

 Score =  106 bits (264), Expect(2) = 2e-26
 Identities = 57/73 (78%), Positives = 60/73 (82%), Gaps = 10/73 (13%)
 Frame = -2

Query: 805 YNKGKP-----YHLIDSSSVLLTTPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSKT 641
           YNKGKP      HLI++SSVLLTTPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQS+T
Sbjct: 7   YNKGKPPTLILCHLIETSSVLLTTPRGQGRGRTVIPGFAVRYISIMLPSQTRHLMCQSQT 66

Query: 640 AV-----PLFLHM 617
            V      LFLHM
Sbjct: 67  VVLPSPLLLFLHM 79



 Score = 39.7 bits (91), Expect(2) = 2e-26
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -1

Query: 602 QRREDNFFLLCLAQSSFSD 546
           QRR DNFFLLCLAQSSFSD
Sbjct: 83  QRRGDNFFLLCLAQSSFSD 101


>gb|AFR34339.1| hypothetical protein GlmaxMp13 (mitochondrion) [Glycine max]
          Length = 287

 Score =  115 bits (287), Expect = 2e-23
 Identities = 66/123 (53%), Positives = 78/123 (63%), Gaps = 10/123 (8%)
 Frame = -3

Query: 777 LIQVPCCSPLLEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLF-----LFFYICG 613
           LI+VPCCSPL EAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLF     LFFYICG
Sbjct: 161 LIKVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYPAKPATSCAKVKRLFFLPRSLFFYICG 220

Query: 612 GGLPEKRGQL-----LSALPCSIFLF*LKVASHSTTVLVQRPDRRLLLLYVCSGEEHLEA 448
                 R ++      ++   ++  F   + S        R  +  +   +CSG+EHLEA
Sbjct: 221 RSTLYDRRRVTREEGTTSFSLALLHFPFLIESRKPLHYWYRGQK--VASSICSGKEHLEA 278

Query: 447 SSC 439
           S C
Sbjct: 279 SFC 281



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 55/149 (36%), Positives = 65/149 (43%), Gaps = 22/149 (14%)
 Frame = -2

Query: 856 VMLHFFGLEVPECFLWIYNKGKP--YHLIDSSSVLLTTPRGQGRGRTVIPGF-------- 707
           +MLHFFGLEVP C LWI NKGKP  ++L     V   +P  + +   V P F        
Sbjct: 131 LMLHFFGLEVPGCCLWISNKGKPPLFYLCHLIKVPCCSPLPEAKD-GVEPSFQDLQSDTF 189

Query: 706 ------------AVRYISIMLPSQTRHLMCQSKTAVPLFLHMXXXXXXXXXXTSFCFALL 563
                       A       LP      +C   T     L+           TSF  ALL
Sbjct: 190 PLCYPAKPATSCAKVKRLFFLPRSLFFYICGRST-----LYDRRRVTREEGTTSFSLALL 244

Query: 562 NLPFLIESSKPLHYCTGTEAR*KVASSIC 476
           + PFLIES KPLHY    +   KVASSIC
Sbjct: 245 HFPFLIESRKPLHYWYRGQ---KVASSIC 270


>ref|XP_002535171.1| conserved hypothetical protein [Ricinus communis]
           gi|223523835|gb|EEF27211.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
 Frame = +2

Query: 440 QELASRCSSPEHTYRR-SNLLSGL--------CTSTVVEWLATFNQKRKIEQGKAERSCP 592
           Q L SRC+    +Y R +N  +GL            VVEWL TFNQKRK+EQGK ERSCP
Sbjct: 20  QRLFSRCALASASYCRINNGSAGLDEQPSIWPIYQPVVEWLRTFNQKRKMEQGKGERSCP 79

Query: 593 LFSGNPPP 616
           LFSG PPP
Sbjct: 80  LFSGKPPP 87


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