BLASTX nr result

ID: Cnidium21_contig00022025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022025
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   400   e-109
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   371   e-100
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...   346   8e-93
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              297   3e-78
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  400 bits (1027), Expect = e-109
 Identities = 209/342 (61%), Positives = 240/342 (70%), Gaps = 6/342 (1%)
 Frame = +3

Query: 228  YGAPQKMQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQFQRSEASGPSAGGAV 407
            YG  QKM + GGGAISALA+DE +GEDDEYDDLYNDVNVG+GFLQ  RSEA  PS G   
Sbjct: 13   YGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPS-GVMA 71

Query: 408  NGGFQTQKTTVPEPRPENPLPKEVNIHGAPNEGKFTNSGVPFTDPKERLTTEMVPNIG-- 581
             G FQ  KT VP  + E    + + I G   EGK++N    F + KE       P +G  
Sbjct: 72   GGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPH--FHEKKEGPMAVKGPEMGST 129

Query: 582  ----GNNTSQKAIPPGSIHDAQASNMGFRGPTPVAQNTGIDPVDMSGKVANEPQPLLNPN 749
                G + SQK       HD Q  N+GF+G TP+ Q TG +P D+ GK+ANE  P+LN  
Sbjct: 130  SHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSG 189

Query: 750  TGVPRGVSQVPANHSNVNVNMNRQIANDNPIRPAGDNGATMLFVGELHWWTTDAEIESVS 929
            TG PR V Q+ +N   +NVN+NR + N+N IRPA DNGATMLFVGELHWWTTDAE+ESV 
Sbjct: 190  TGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVL 249

Query: 930  SQYGPVKEIKFFDEKASGKSKGYCQVEFYDSASAAACKEGMNGYIFNGRACVVAFASPQT 1109
            SQYG VKEIKFFDE+ASGKSKGYCQVEFYD+++AAACKEGMNGYIFNGRACVVAFASPQT
Sbjct: 250  SQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQT 309

Query: 1110 IKQMGASYMNKXXXXXXXXXXGRRPMNDNAGRGGGTNYPSGD 1235
            +KQMGASYMNK          GRRPMND  GRGGG N   GD
Sbjct: 310  LKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGD 349


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  371 bits (953), Expect = e-100
 Identities = 192/339 (56%), Positives = 243/339 (71%), Gaps = 3/339 (0%)
 Frame = +3

Query: 228  YGAPQKMQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQFQRSEASGPSAGGAV 407
            YG  QK+QY G GAI ALAE+E +GEDDEYDDLYNDVN+G+ FLQ  RSEA  P+     
Sbjct: 13   YGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAP-PAPPSVG 70

Query: 408  NGGFQTQKTTVPEPRPENPLPKEVNIHGAPNEGKFTNSGVPFTDPKERLTTEMVPNIG-- 581
            NGGFQ + +   + R E+   + +NI G   E K++ +G  F  P++ +    + ++G  
Sbjct: 71   NGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKYS-TGTHF--PEQNVKGPEIGSVGYP 125

Query: 582  -GNNTSQKAIPPGSIHDAQASNMGFRGPTPVAQNTGIDPVDMSGKVANEPQPLLNPNTGV 758
             G++ +QK       +D+QA NMGF+G T    N G+DP DM+ K++N+P P+  PN GV
Sbjct: 126  DGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPV--PNAGV 183

Query: 759  PRGVSQVPANHSNVNVNMNRQIANDNPIRPAGDNGATMLFVGELHWWTTDAEIESVSSQY 938
            PR + Q+PA+  N+N++ NR   N+N IRP  +NG+TML+VGELHWWTTDAE+E+V SQY
Sbjct: 184  PRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVLSQY 243

Query: 939  GPVKEIKFFDEKASGKSKGYCQVEFYDSASAAACKEGMNGYIFNGRACVVAFASPQTIKQ 1118
            G VKEIKFFDE+ASGKSKGYCQVEFYD+A+AAACKEGMNG++FNGRACVVAFAS QT+KQ
Sbjct: 244  GMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQTLKQ 303

Query: 1119 MGASYMNKXXXXXXXXXXGRRPMNDNAGRGGGTNYPSGD 1235
            MGASYMNK          GRRPMND AGRGG  NY  GD
Sbjct: 304  MGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGD 342


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
            predicted protein [Populus trichocarpa]
          Length = 619

 Score =  346 bits (887), Expect = 8e-93
 Identities = 179/339 (52%), Positives = 223/339 (65%), Gaps = 3/339 (0%)
 Frame = +3

Query: 228  YGAPQKMQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQFQRSEASGPSAGGAV 407
            Y   +KMQY G GAI ALAE+E +GEDDEYDDLYNDVNVG+ FLQ   SEA  P A    
Sbjct: 3    YEEEEKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVG- 60

Query: 408  NGGFQTQKTTVPEPRPENPLPKEVNIHGAPNEGKFTNSGVPFTDPKERLTTEMVPNIG-- 581
            NGGFQT+                +   G   EG ++N+   F + K+        ++G  
Sbjct: 61   NGGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPV 120

Query: 582  -GNNTSQKAIPPGSIHDAQASNMGFRGPTPVAQNTGIDPVDMSGKVANEPQPLLNPNTGV 758
             G++ +QK       HD Q  NMGF+  TPV    G+DP DMS K A EP+PL    +  
Sbjct: 121  DGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAG 180

Query: 759  PRGVSQVPANHSNVNVNMNRQIANDNPIRPAGDNGATMLFVGELHWWTTDAEIESVSSQY 938
            PRG  Q+  N  +++ ++NR + N+N +RP  +NG+T L+VGELHWWTTDAE+ES +SQ+
Sbjct: 181  PRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQF 240

Query: 939  GPVKEIKFFDEKASGKSKGYCQVEFYDSASAAACKEGMNGYIFNGRACVVAFASPQTIKQ 1118
            G VKEIKFFDE+ASGKSKGYCQV+FY++A+AAACKEGMNG++FNGR CVVAFASPQT+KQ
Sbjct: 241  GRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQ 300

Query: 1119 MGASYMNKXXXXXXXXXXGRRPMNDNAGRGGGTNYPSGD 1235
            MGASYMNK          GR  MND AGRGG  N+ SGD
Sbjct: 301  MGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGD 339


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  297 bits (761), Expect = 3e-78
 Identities = 161/282 (57%), Positives = 189/282 (67%), Gaps = 6/282 (2%)
 Frame = +3

Query: 246  MQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQFQRSEASGPSAGGAVNGGFQT 425
            M + GGGAISALA+DE +GEDDEYDDLYNDVNVG+GFLQ  RSEA  PS G    G FQ 
Sbjct: 1    MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPS-GVMAGGPFQA 59

Query: 426  QKTTVPEPRPENPLPKEVNIHGAPNEGKFTNSGVPFTDPKERLTTEMVPNIG------GN 587
             KT VP  + E    + + I G   EGK++N    F + KE       P +G      G 
Sbjct: 60   HKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPH--FHEKKEGPMAVKGPEMGSTSHLDGP 117

Query: 588  NTSQKAIPPGSIHDAQASNMGFRGPTPVAQNTGIDPVDMSGKVANEPQPLLNPNTGVPRG 767
            + SQK       HD Q  N+GF+G TP+ Q TG +P D+ GK+ANE  P+LN  TG PR 
Sbjct: 118  SVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRA 177

Query: 768  VSQVPANHSNVNVNMNRQIANDNPIRPAGDNGATMLFVGELHWWTTDAEIESVSSQYGPV 947
            V Q+ +N   +NVN+NR + N+N IRPA DNGATMLFVGELHWWTTDAE+ESV SQYG V
Sbjct: 178  VPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRV 237

Query: 948  KEIKFFDEKASGKSKGYCQVEFYDSASAAACKEGMNGYIFNG 1073
            KEIKFFDE+ASGKSKGYCQVEFYD ASAAA   G  G +  G
Sbjct: 238  KEIKFFDERASGKSKGYCQVEFYD-ASAAAAFSGKEGILNRG 278


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  295 bits (756), Expect = 1e-77
 Identities = 163/332 (49%), Positives = 200/332 (60%)
 Frame = +3

Query: 240  QKMQYHGGGAISALAEDENIGEDDEYDDLYNDVNVGDGFLQFQRSEASGPSAGGAVNGGF 419
            +KMQY G GAI ALAE+E +GEDDEYDDLYNDVNVG+ FLQ   SEA  P A  A NGGF
Sbjct: 7    EKMQYQGSGAIPALAEEE-LGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPA-TAGNGGF 64

Query: 420  QTQKTTVPEPRPENPLPKEVNIHGAPNEGKFTNSGVPFTDPKERLTTEMVPNIGGNNTSQ 599
            QT+                 +  G   EGK++N+G  F + K+         IG      
Sbjct: 65   QTRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ-------AGIG------ 111

Query: 600  KAIPPGSIHDAQASNMGFRGPTPVAQNTGIDPVDMSGKVANEPQPLLNPNTGVPRGVSQV 779
                   +      ++G+   + VAQ                        +  PRGV Q+
Sbjct: 112  -------VEANDVGSIGYGDGSSVAQK----------------------GSAGPRGVPQM 142

Query: 780  PANHSNVNVNMNRQIANDNPIRPAGDNGATMLFVGELHWWTTDAEIESVSSQYGPVKEIK 959
              N  N+N ++NR + N+N +RP  +NG T L+VGELHWWTTDAE+ESV+SQYG VKEIK
Sbjct: 143  QVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIK 202

Query: 960  FFDEKASGKSKGYCQVEFYDSASAAACKEGMNGYIFNGRACVVAFASPQTIKQMGASYMN 1139
            FFDE+ASGKSKGYCQV+FY++A+AAACKEGMN ++FNGR CVVAFAS QT+KQMGASYM+
Sbjct: 203  FFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMS 262

Query: 1140 KXXXXXXXXXXGRRPMNDNAGRGGGTNYPSGD 1235
            K          GR  MND  GRGG  NY SGD
Sbjct: 263  KTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294


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