BLASTX nr result

ID: Cnidium21_contig00022024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022024
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512427.1| Rubber elongation factor protein, putative [...   109   7e-22
ref|XP_002882419.1| rubber elongation factor family protein [Ara...   107   4e-21
ref|XP_002334152.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
ref|XP_002319520.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
gb|AEX97052.1| rubber elongation factor [Copaifera officinalis]       106   6e-21

>ref|XP_002512427.1| Rubber elongation factor protein, putative [Ricinus communis]
           gi|223548388|gb|EEF49879.1| Rubber elongation factor
           protein, putative [Ricinus communis]
          Length = 241

 Score =  109 bits (272), Expect = 7e-22
 Identities = 56/120 (46%), Positives = 78/120 (65%)
 Frame = -2

Query: 712 ASSLIKEASNQARAIALNVKRADVVEMDTIVAKTVYVKYDPVAVEYYNNYKPLAEKFVIM 533
           A S+ +EA   ARA+A  V+R  V E  + +AKT+Y  Y+P A E Y+ Y+P AE+  + 
Sbjct: 110 AYSVAREAPVAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVS 169

Query: 532 ALCSLNRLALFPQLSCVLVPTVAYCAQRYNLTVVYFTSRGYRVSYYVPLVHVDEIGSILR 353
           A   LN+L LFPQ++ V VPT AYC+++YN TVV    +GYRVS Y+PLV   +I  + R
Sbjct: 170 AWRKLNQLPLFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVFR 229


>ref|XP_002882419.1| rubber elongation factor family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328259|gb|EFH58678.1| rubber elongation
           factor family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  107 bits (266), Expect = 4e-21
 Identities = 54/107 (50%), Positives = 74/107 (69%)
 Frame = -2

Query: 679 ARAIALNVKRADVVEMDTIVAKTVYVKYDPVAVEYYNNYKPLAEKFVIMALCSLNRLALF 500
           ARA+A  V+RA VVE  + +AK+VY KY+P A E Y NY+P AE+  + A   LN+L LF
Sbjct: 123 ARALASEVRRAGVVETASGMAKSVYTKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLF 182

Query: 499 PQLSCVLVPTVAYCAQRYNLTVVYFTSRGYRVSYYVPLVHVDEIGSI 359
           P+L+ V VPT A+C+++YN TVV    +GYRV+ Y+PLV  + I  I
Sbjct: 183 PRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKI 229


>ref|XP_002334152.1| predicted protein [Populus trichocarpa] gi|222869868|gb|EEF06999.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  106 bits (265), Expect = 5e-21
 Identities = 54/118 (45%), Positives = 78/118 (66%)
 Frame = -2

Query: 712 ASSLIKEASNQARAIALNVKRADVVEMDTIVAKTVYVKYDPVAVEYYNNYKPLAEKFVIM 533
           A S  + A   ARA+A  V+R+ V    + +AKTVY KY+P A E Y+ Y+P AE+  + 
Sbjct: 28  ALSAAQNAPVAARAVASEVQRSGVKGTASELAKTVYAKYEPTAKELYSKYEPKAEQAAVS 87

Query: 532 ALCSLNRLALFPQLSCVLVPTVAYCAQRYNLTVVYFTSRGYRVSYYVPLVHVDEIGSI 359
           A   LN+L LFPQ++ V+VPT A+C+++YN TVV    +GYRVS Y+PLV  ++I  +
Sbjct: 88  AWRKLNKLPLFPQVAQVVVPTAAFCSEKYNQTVVSTAEKGYRVSSYLPLVPTEKIAKV 145


>ref|XP_002319520.1| predicted protein [Populus trichocarpa] gi|222857896|gb|EEE95443.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  106 bits (265), Expect = 5e-21
 Identities = 54/118 (45%), Positives = 78/118 (66%)
 Frame = -2

Query: 712 ASSLIKEASNQARAIALNVKRADVVEMDTIVAKTVYVKYDPVAVEYYNNYKPLAEKFVIM 533
           A S  + A   ARA+A  V+R+ V    + +AKTVY KY+P A E Y+ Y+P AE+  + 
Sbjct: 111 ALSAAQNAPVAARAVASEVQRSGVKGTASELAKTVYAKYEPTAKELYSKYEPKAEQAAVS 170

Query: 532 ALCSLNRLALFPQLSCVLVPTVAYCAQRYNLTVVYFTSRGYRVSYYVPLVHVDEIGSI 359
           A   LN+L LFPQ++ V+VPT A+C+++YN TVV    +GYRVS Y+PLV  ++I  +
Sbjct: 171 AWRKLNKLPLFPQVAQVVVPTAAFCSEKYNQTVVSTAEKGYRVSSYLPLVPTEKIAKV 228


>gb|AEX97052.1| rubber elongation factor [Copaifera officinalis]
          Length = 246

 Score =  106 bits (264), Expect = 6e-21
 Identities = 54/120 (45%), Positives = 78/120 (65%)
 Frame = -2

Query: 718 STASSLIKEASNQARAIALNVKRADVVEMDTIVAKTVYVKYDPVAVEYYNNYKPLAEKFV 539
           S A S  ++A   AR +   V+RA VV+  + +AK+VY K +P A + Y+ Y+P AEK  
Sbjct: 109 SQALSAAQKAPEAARTVVSEVRRAGVVDTASGLAKSVYGKCEPTAKDLYSKYEPKAEKCA 168

Query: 538 IMALCSLNRLALFPQLSCVLVPTVAYCAQRYNLTVVYFTSRGYRVSYYVPLVHVDEIGSI 359
           + A   LN+L LFPQ++ V+VPT AYC ++YN TVV    +GY+VS Y+PLV  ++I  I
Sbjct: 169 VSAWRKLNKLPLFPQMANVIVPTAAYCTEKYNETVVSTAEKGYKVSAYLPLVPTEKIAKI 228


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