BLASTX nr result

ID: Cnidium21_contig00022019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022019
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   200   9e-50
emb|CBI29999.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   192   3e-47
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   187   1e-45
ref|XP_003521223.1| PREDICTED: gamma-tubulin complex component 3...   184   8e-45

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223527963|gb|EEF30048.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 855

 Score =  200 bits (509), Expect = 9e-50
 Identities = 100/160 (62%), Positives = 124/160 (77%), Gaps = 2/160 (1%)
 Frame = +2

Query: 2    SSEMEXXXXXXXXXXXHEKYLHSIVEKSLLGERSQSLYKTXXXXXXXXXXXXSHADRLYE 181
            S++ME           HEKYLHSIVEKSLLGERSQ LYK+            SHADRLYE
Sbjct: 691  SNDMEVARDLDDLLAAHEKYLHSIVEKSLLGERSQLLYKSLFVLFDLILRFRSHADRLYE 750

Query: 182  GVNELQARTVESSLLSRDK--TNRQSSKKTSVPGSWLGEGRKAITQRAGEFLTHSGQEID 355
            G++ELQART+ S+L S+DK  + RQ++ K+S PGSW+ +GRKA+TQRAGEFL + G E+D
Sbjct: 751  GIHELQARTMASTLPSQDKKKSRRQATDKSSEPGSWISDGRKALTQRAGEFLQNMGHELD 810

Query: 356  TISKEYSTLFQGFISQLPVQQHIDLKFLMFRLDFTEFYSR 475
            T++KEY+TL +GF+SQLPVQQH+DLKFL+FRLDFTEFYSR
Sbjct: 811  TVAKEYTTLLKGFLSQLPVQQHVDLKFLLFRLDFTEFYSR 850


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  192 bits (487), Expect = 3e-47
 Identities = 98/158 (62%), Positives = 119/158 (75%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2    SSEMEXXXXXXXXXXXHEKYLHSIVEKSLLGERSQSLYKTXXXXXXXXXXXXSHADRLYE 181
            S+EME           H+KYL+SIVEKSLLGERSQ+LYKT            SH DRLYE
Sbjct: 613  SNEMEAAKDLDDLLAAHDKYLNSIVEKSLLGERSQNLYKTLFVLFDLILRFRSHVDRLYE 672

Query: 182  GVNELQARTVESSLLSRDKTN--RQSSKKTSVPGSWLGEGRKAITQRAGEFLTHSGQEID 355
            G++ELQ+RT+ES   SRDKT   R  + KT+ PG+W+ +GRKA+TQRAGEFL + GQ++D
Sbjct: 673  GIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLRNMGQDLD 732

Query: 356  TISKEYSTLFQGFISQLPVQQHIDLKFLMFRLDFTEFY 469
             I+KEYS+L +GFISQLPVQQHIDLKFL+FRLDFTEFY
Sbjct: 733  AIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 770


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis vinifera]
          Length = 854

 Score =  192 bits (487), Expect = 3e-47
 Identities = 98/158 (62%), Positives = 119/158 (75%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2    SSEMEXXXXXXXXXXXHEKYLHSIVEKSLLGERSQSLYKTXXXXXXXXXXXXSHADRLYE 181
            S+EME           H+KYL+SIVEKSLLGERSQ+LYKT            SH DRLYE
Sbjct: 690  SNEMEAAKDLDDLLAAHDKYLNSIVEKSLLGERSQNLYKTLFVLFDLILRFRSHVDRLYE 749

Query: 182  GVNELQARTVESSLLSRDKTN--RQSSKKTSVPGSWLGEGRKAITQRAGEFLTHSGQEID 355
            G++ELQ+RT+ES   SRDKT   R  + KT+ PG+W+ +GRKA+TQRAGEFL + GQ++D
Sbjct: 750  GIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLRNMGQDLD 809

Query: 356  TISKEYSTLFQGFISQLPVQQHIDLKFLMFRLDFTEFY 469
             I+KEYS+L +GFISQLPVQQHIDLKFL+FRLDFTEFY
Sbjct: 810  AIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 847


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222855271|gb|EEE92818.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  187 bits (474), Expect = 1e-45
 Identities = 98/160 (61%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
 Frame = +2

Query: 2    SSEMEXXXXXXXXXXXHEKYLHSIVEKSLLGERSQSLYKTXXXXXXXXXXXXSHADRLYE 181
            S+EME           H+KYLHSIVEKSLLGERSQSLYK+            SHADRL E
Sbjct: 696  SNEMEVAKDLDDLLAAHDKYLHSIVEKSLLGERSQSLYKSLFVLFDLILHFRSHADRLCE 755

Query: 182  GVNELQARTVESSLLSRDKTN--RQSSKKTSVPGSWLGEGRKAITQRAGEFLTHSGQEID 355
            G+ ELQART  SSL S+DKT   R +    S PGSW  +GRKA+ QRAGEFL + G+E++
Sbjct: 756  GIYELQARTRASSLSSQDKTKSRRHTRDNPSEPGSWFSDGRKALEQRAGEFLQNMGRELE 815

Query: 356  TISKEYSTLFQGFISQLPVQQHIDLKFLMFRLDFTEFYSR 475
             ISKEY+ L +GF+SQLPVQQH+DLKFL FRLDFTEFYSR
Sbjct: 816  EISKEYTVLLEGFLSQLPVQQHVDLKFLFFRLDFTEFYSR 855


>ref|XP_003521223.1| PREDICTED: gamma-tubulin complex component 3 homolog [Glycine max]
          Length = 844

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/161 (60%), Positives = 115/161 (71%), Gaps = 4/161 (2%)
 Frame = +2

Query: 5    SEMEXXXXXXXXXXXHEKYLHSIVEKSLLGERSQSLYKTXXXXXXXXXXXXSHADRLYEG 184
            +EME           HEKYLHSIVEKSLLGE SQSLYK+            S ADRLYEG
Sbjct: 679  AEMEVAKDLDDLLAAHEKYLHSIVEKSLLGELSQSLYKSLFVIFDLILRFRSRADRLYEG 738

Query: 185  VNELQARTVESSLLSRDK----TNRQSSKKTSVPGSWLGEGRKAITQRAGEFLTHSGQEI 352
            ++ELQAR  ESSL SRDK    + +Q S K++  GSW+ +GRKA+TQRAGEFL +  Q++
Sbjct: 739  IHELQARFTESSLSSRDKNQSRSRKQLSDKSAEQGSWIADGRKALTQRAGEFLRNMEQDL 798

Query: 353  DTISKEYSTLFQGFISQLPVQQHIDLKFLMFRLDFTEFYSR 475
            D I+KEYS+L +GFISQLPVQQH+DLKFL FRLDF EFY R
Sbjct: 799  DAIAKEYSSLQEGFISQLPVQQHVDLKFLFFRLDFNEFYRR 839


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