BLASTX nr result

ID: Cnidium21_contig00022013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022013
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   275   3e-72
emb|CBI29999.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   273   1e-71
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   268   3e-70
ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3...   266   1e-69

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  275 bits (703), Expect = 3e-72
 Identities = 137/157 (87%), Positives = 143/157 (91%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   DIVGPELSEPANTISSFKLAGLLESAIRSSSAQYDDPDILDRLRVKMMPHNIGDRGWDVF 180
           DIVGPELSEPANTISSFKLAGLLESAIRSS+AQYDDPDILDRLRVKMMPH  GDRGWDVF
Sbjct: 527 DIVGPELSEPANTISSFKLAGLLESAIRSSNAQYDDPDILDRLRVKMMPHGTGDRGWDVF 586

Query: 181 SLEYDARVPLNTLFTESVMTKYLRIFNFLWKLRRVEHALIGVWKTMKPNSI---AFTKLP 351
           SLEYDARVPL+T+FT+SVM +YLRIFNFLWKLRRVEHALIG WKTMKPN I   AF KL 
Sbjct: 587 SLEYDARVPLDTVFTKSVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSHAFIKLQ 646

Query: 352 EAVKLQLILASRRCQVLWDEMNHFITNLQYYIMFEVL 462
            AVKLQL+   RRCQVLWDEMNHFITNLQYYIMFEVL
Sbjct: 647 GAVKLQLLSTLRRCQVLWDEMNHFITNLQYYIMFEVL 683


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  273 bits (697), Expect = 1e-71
 Identities = 135/157 (85%), Positives = 142/157 (90%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   DIVGPELSEPANTISSFKLAGLLESAIRSSSAQYDDPDILDRLRVKMMPHNIGDRGWDVF 180
           DIVGPELSEPANTISSFKLAGLLESAIRSS+AQYDD DILDRLRVKMMPH  GDRGWDVF
Sbjct: 449 DIVGPELSEPANTISSFKLAGLLESAIRSSNAQYDDRDILDRLRVKMMPHGTGDRGWDVF 508

Query: 181 SLEYDARVPLNTLFTESVMTKYLRIFNFLWKLRRVEHALIGVWKTMKPNSI---AFTKLP 351
           SLEYDARVPLNT+FTESVM +YLRIFNFLWKLRRVEHALIG WKTMKPN I   +F KL 
Sbjct: 509 SLEYDARVPLNTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSNSFIKLQ 568

Query: 352 EAVKLQLILASRRCQVLWDEMNHFITNLQYYIMFEVL 462
            AVKLQL+   RRCQVLWDEMNHF++NLQYYIMFEVL
Sbjct: 569 SAVKLQLLSTLRRCQVLWDEMNHFVSNLQYYIMFEVL 605


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  273 bits (697), Expect = 1e-71
 Identities = 135/157 (85%), Positives = 142/157 (90%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   DIVGPELSEPANTISSFKLAGLLESAIRSSSAQYDDPDILDRLRVKMMPHNIGDRGWDVF 180
           DIVGPELSEPANTISSFKLAGLLESAIRSS+AQYDD DILDRLRVKMMPH  GDRGWDVF
Sbjct: 526 DIVGPELSEPANTISSFKLAGLLESAIRSSNAQYDDRDILDRLRVKMMPHGTGDRGWDVF 585

Query: 181 SLEYDARVPLNTLFTESVMTKYLRIFNFLWKLRRVEHALIGVWKTMKPNSI---AFTKLP 351
           SLEYDARVPLNT+FTESVM +YLRIFNFLWKLRRVEHALIG WKTMKPN I   +F KL 
Sbjct: 586 SLEYDARVPLNTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSNSFIKLQ 645

Query: 352 EAVKLQLILASRRCQVLWDEMNHFITNLQYYIMFEVL 462
            AVKLQL+   RRCQVLWDEMNHF++NLQYYIMFEVL
Sbjct: 646 SAVKLQLLSTLRRCQVLWDEMNHFVSNLQYYIMFEVL 682


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222855271|gb|EEE92818.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  268 bits (686), Expect = 3e-70
 Identities = 131/157 (83%), Positives = 144/157 (91%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1    DIVGPELSEPANTISSFKLAGLLESAIRSSSAQYDDPDILDRLRVKMMPHNIGDRGWDVF 180
            DIVG ELSEPANTISSF+LAGLLESAIRSS+AQYDDPDILDRLRVKM+PH  GDRGWDVF
Sbjct: 532  DIVGQELSEPANTISSFQLAGLLESAIRSSNAQYDDPDILDRLRVKMLPHGTGDRGWDVF 591

Query: 181  SLEYDARVPLNTLFTESVMTKYLRIFNFLWKLRRVEHALIGVWKTMKPNSI---AFTKLP 351
            SLEYDARVPL+T+FTESVM +YLRIFNFLWKLRRVEHALIG WKTMKPN I   +FTKL 
Sbjct: 592  SLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSHSFTKLQ 651

Query: 352  EAVKLQLILASRRCQVLWDEMNHFITNLQYYIMFEVL 462
            +AVKLQL+   R+CQVLW++MNHF+TNLQYYIMFEVL
Sbjct: 652  DAVKLQLLSTLRQCQVLWNQMNHFVTNLQYYIMFEVL 688


>ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3 homolog [Glycine max]
          Length = 842

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/157 (82%), Positives = 143/157 (91%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   DIVGPELSEPANTISSFKLAGLLESAIRSSSAQYDDPDILDRLRVKMMPHNIGDRGWDVF 180
           DIVGPELSEPANTISSFKL+GLLE+AIR+S+AQYDDPDILDRLRVKMMPH  GDRGWDVF
Sbjct: 512 DIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVF 571

Query: 181 SLEYDARVPLNTLFTESVMTKYLRIFNFLWKLRRVEHALIGVWKTMKPNSI---AFTKLP 351
           SLEYDARVPL+T+FTESVMT+YLRIFNFLWKLRRVEHAL G WKTMKPN I   +FT+L 
Sbjct: 572 SLEYDARVPLDTVFTESVMTRYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQ 631

Query: 352 EAVKLQLILASRRCQVLWDEMNHFITNLQYYIMFEVL 462
            AVK+QL+   RRCQVLW E+NHFI+NLQYYIMFEVL
Sbjct: 632 HAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVL 668


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