BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021997
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   233   5e-59
ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   232   9e-59
ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana] ...   225   1e-56
ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arab...   222   1e-55
ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   221   2e-55

>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  233 bits (594), Expect = 5e-59
 Identities = 124/198 (62%), Positives = 146/198 (73%), Gaps = 13/198 (6%)
 Frame = +2

Query: 212 METCSFSISSPPLRSPPTFHKSKHLHH--LTKPLRKTQKR----TPLLATLNSPKGFGPS 373
           ME CSFS ++P L SPP+   + ++    ++ P   ++ R    TP  A+LN PKGFGPS
Sbjct: 1   MECCSFSTTTP-LISPPSSTPALYISQFPISTPKLYSKNRLLHSTPPCASLNRPKGFGPS 59

Query: 374 PRKTKNPKKDLKKQENNDEVEEMRQAD-------VIPEIVTNRMIKRMGFSVGIPLFIGL 532
           PRKT+  KK LKK  ++DE EE  + +       VIPEIVTNRMI RMGFSVGIPL IGL
Sbjct: 60  PRKTEKRKK-LKKNYSDDEDEEEEEEEGAEAEEGVIPEIVTNRMISRMGFSVGIPLMIGL 118

Query: 533 MFFPLFYYLKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVSSSWDPMREGSALGWIEA 712
           +FFP FYYLKVGLK+DVP+WVP IVSF FFG+ALLGVSYGIVSSSWDP+REGS LGW EA
Sbjct: 119 LFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFLGWTEA 178

Query: 713 QKNWPVFWQSLGGSDSRK 766
           Q NWPVFWQSL G   +K
Sbjct: 179 QNNWPVFWQSLWGRSGKK 196


>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  232 bits (592), Expect = 9e-59
 Identities = 119/196 (60%), Positives = 140/196 (71%), Gaps = 12/196 (6%)
 Frame = +2

Query: 215 ETCSFSISSPPLRSPPTFHKSK-----HLHHLTKPLRKTQKRTPLLATLNSPKGFGPSPR 379
           +  +F+ S  P++    F  SK     + +H + P        PL ATLNSP+GFGPSP+
Sbjct: 33  QASTFTFSLSPIKQASQFPISKQNFYPNQYHFSYP-------KPLYATLNSPRGFGPSPK 85

Query: 380 KTKNPKK-------DLKKQENNDEVEEMRQADVIPEIVTNRMIKRMGFSVGIPLFIGLMF 538
           KTK  KK       D    +NND+ +E + A +IPE+VTNRMI RMGFSVG+PLFIGL+F
Sbjct: 86  KTKRTKKLKTVNPNDDDDDDNNDDDDE-QDAGIIPEVVTNRMISRMGFSVGVPLFIGLLF 144

Query: 539 FPLFYYLKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVSSSWDPMREGSALGWIEAQK 718
           FP FYYLKVGLK+DVP+WVP IVSF FFGTALLGVSYGIVSSSWDPMREGS LGW EAQK
Sbjct: 145 FPFFYYLKVGLKIDVPTWVPYIVSFFFFGTALLGVSYGIVSSSWDPMREGSLLGWNEAQK 204

Query: 719 NWPVFWQSLGGSDSRK 766
           NWPVFWQS  G   +K
Sbjct: 205 NWPVFWQSFWGRSGKK 220


>ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75098840|sp|O49668.1|PAM68_ARATH RecName:
           Full=Protein PAM68, chloroplastic; AltName:
           Full=PHOTOSYNTHESIS AFFECTED MUTANT 68; Flags: Precursor
           gi|2828285|emb|CAA16699.1| putative protein [Arabidopsis
           thaliana] gi|7268705|emb|CAB78912.1| putative protein
           [Arabidopsis thaliana] gi|119360097|gb|ABL66777.1|
           At4g19100 [Arabidopsis thaliana]
           gi|332658740|gb|AEE84140.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 214

 Score =  225 bits (573), Expect = 1e-56
 Identities = 118/209 (56%), Positives = 138/209 (66%), Gaps = 27/209 (12%)
 Frame = +2

Query: 221 CSFSISSPPLRSPPTFHKSKHLHHLTKPLRKTQKR-----------------TPLLATLN 349
           CSF +S+    S      +K    L + LR   K                   PL AT+N
Sbjct: 6   CSFKLSAHRRSSSKLDGNNKQCSSLVERLRDKTKSQVPKSITCINRLEISRIAPLHATMN 65

Query: 350 SPKGFGPSPRKTKNPKK----------DLKKQENNDEVEEMRQADVIPEIVTNRMIKRMG 499
           SPKGFGP P+KTK  KK          D  + E++D+ E+ R+  VIPEIVTNRMI RMG
Sbjct: 66  SPKGFGPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMG 125

Query: 500 FSVGIPLFIGLMFFPLFYYLKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVSSSWDPM 679
           F+VG+PLFIGL+FFP FYYLKVGLKVDVP+WVP IVSFVFFGTAL GVSYGIVSSSWDP+
Sbjct: 126 FTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPL 185

Query: 680 REGSALGWIEAQKNWPVFWQSLGGSDSRK 766
           REGS LGW EA+KNWPVFWQS   S  ++
Sbjct: 186 REGSLLGWNEAKKNWPVFWQSFWNSSDKR 214


>ref|XP_002870000.1| hypothetical protein ARALYDRAFT_492947 [Arabidopsis lyrata subsp.
           lyrata] gi|297315836|gb|EFH46259.1| hypothetical protein
           ARALYDRAFT_492947 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  222 bits (565), Expect = 1e-55
 Identities = 116/209 (55%), Positives = 138/209 (66%), Gaps = 27/209 (12%)
 Frame = +2

Query: 221 CSFSISSPPLRSPPTFHKSKHLHHLTKPLRKTQKR-----------------TPLLATLN 349
           CSF +S+ P  S       K    L + LR   K                  +PL AT+N
Sbjct: 6   CSFKLSAHPRSSSKHDGNYKQCSSLVERLRDKTKSQVPKSITCNNRLEILRISPLHATMN 65

Query: 350 SPKGFGPSPRKTKNPKK----------DLKKQENNDEVEEMRQADVIPEIVTNRMIKRMG 499
           SP+GFGP P+K K  KK          D  + E++D+ E+ R+  VIPEIVTNRMI RMG
Sbjct: 66  SPRGFGPPPKKIKKSKKPKPGNQSDKEDDDEDEDDDDDEDERERGVIPEIVTNRMISRMG 125

Query: 500 FSVGIPLFIGLMFFPLFYYLKVGLKVDVPSWVPVIVSFVFFGTALLGVSYGIVSSSWDPM 679
           F+VG+PLFIGL+FFP FYYLKVGLKVDVP+WVP IVSFVFFGTAL GVSYGIVSSSWDP+
Sbjct: 126 FTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPL 185

Query: 680 REGSALGWIEAQKNWPVFWQSLGGSDSRK 766
           R+GS LGW EA+KNWPVFWQS   S  ++
Sbjct: 186 RKGSLLGWNEAKKNWPVFWQSFRNSSDKR 214


>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  221 bits (563), Expect = 2e-55
 Identities = 111/182 (60%), Positives = 134/182 (73%), Gaps = 7/182 (3%)
 Frame = +2

Query: 242 PPLRSPPTFHKSKHLHHLTKPLRKTQKRTPLLATLNSPKGFGPSPRKTKNPKK------- 400
           P LR  PT +++++  H  +P       T L ATL  PKGFGP+ RK K  K        
Sbjct: 41  PNLR--PTINQNQNQTHTNRP-------TSLNATLRRPKGFGPASRKKKTKKTRREGSED 91

Query: 401 DLKKQENNDEVEEMRQADVIPEIVTNRMIKRMGFSVGIPLFIGLMFFPLFYYLKVGLKVD 580
           D  ++E  ++ EE  +  VIPE+VTNRM+ RMGF+VGIPLFIGL+FFP FYYLKVGLK+D
Sbjct: 92  DDNEEEEEEDEEEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKID 151

Query: 581 VPSWVPVIVSFVFFGTALLGVSYGIVSSSWDPMREGSALGWIEAQKNWPVFWQSLGGSDS 760
           VPSWVPVIVSF FFG+ALLGVSYGIVSSSWDP+REGS LGW EAQKNWPVFW+S+ G  +
Sbjct: 152 VPSWVPVIVSFFFFGSALLGVSYGIVSSSWDPLREGSLLGWNEAQKNWPVFWKSIWGGSN 211

Query: 761 RK 766
           +K
Sbjct: 212 KK 213