BLASTX nr result

ID: Cnidium21_contig00021983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021983
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-11
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    67   1e-08
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    64   7e-08

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
 Frame = -3

Query: 1393 GFELPKSICLPTLTTLILYDVEFTDNVSEFFHALVNLQNLTMIFRTGVCAD----FVLNC 1226
            G  LPKS+ LP+L TL L   +  D   + F +  NL+NLT+     +C +    F ++ 
Sbjct: 161  GIALPKSLGLPSLKTLHLGGAQNFDG--KIFSSCPNLENLTI---EDICLNTIENFNIHA 215

Query: 1225 PQLVNLEIENYTTRDMITDSGKNHKIIVLAPNIHNFSSVNFCPVTFG---VTKLEKVNIY 1055
              L +LEI N+    ++    +  K+++ AP + +F      P+ +    +T L+ VN+ 
Sbjct: 216  LNLKSLEILNWRYSRIM----RGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVV 271

Query: 1054 LEEFEDSNRI-------ETVAAHKETKK-YCRFITDMFLGLCGAKILSLDMTTIEALSAL 899
            L+ +   +         E ++   ETK+ +C  +  M    C AK L+L M  IE LS +
Sbjct: 272  LQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKV 331

Query: 898  SNFLVYSPPPFYNLEYVKVPHGYSESCMSTNLKKYLLGCS 779
               L   P PF NL+Y+K+   + +  +  ++  Y L  S
Sbjct: 332  PAALNKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFLSSS 371


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
 Frame = -3

Query: 1393 GFELPKSICLPTLTTLILYDVEFTDNVSEFFHALVNLQNLTMI-FRTGVCADFVLNCPQL 1217
            G  LPKS+ L +L TL L   +  D   + F +  NL+NLT+      V  +F ++   L
Sbjct: 180  GLALPKSLGLQSLKTLHLGGAQNFDG--KIFSSCPNLENLTIEDICLNVIENFNIHALSL 237

Query: 1216 VNLEIENYTTRDMITDSGKNHKIIVLAPNIHNFSSVNFCPVTFG---VTKLEKVNIYLEE 1046
             +LEI N+    +     +  K++++AP + +F      P+ +    +T L+ VN+ L+ 
Sbjct: 238  KSLEILNWRYNRI----KQGCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQR 293

Query: 1045 FEDSNRI-------ETVAAHKETKKYCRF-ITDMFLGLCGAKILSLDMTTIEALSALSNF 890
            +  S+         E ++   ET++     +  M    C AK L+L M  IE LS +   
Sbjct: 294  YHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAA 353

Query: 889  LVYSPPPFYNLEYVKVPHGYSESCMSTNLKKYLL 788
            L   P PF NL+Y+K+   + +  +  ++  Y L
Sbjct: 354  LDKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFL 387


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
 Frame = -3

Query: 1393 GFELPKSICLPTLTTLILYDVEFTDNVSEFFHALVNLQNLTMI-FRTGVCADFVLNCPQL 1217
            G  LPKS+ L +L TL L      D   + F    NL+NL +         +F ++   L
Sbjct: 180  GIALPKSLGLQSLKTLHLGGARNFDG--KIFSTCPNLENLKIEDIYLNTIENFNIHALNL 237

Query: 1216 VNLEIENYTTRDMITDSGKNHKIIVLAPNIHNFSSVNFCPVTFG---VTKLEKVNIYLEE 1046
             +LEI N+    ++    +  K+++ AP + +F      P+ +    +T L+ VN+ L+ 
Sbjct: 238  KSLEILNWRYGRIM----RGCKVMLFAPKLTSFKFYGNTPLFWSEVNLTSLDDVNVVLQR 293

Query: 1045 FEDSNRI-------ETVAAHKETKKYCRF-ITDMFLGLCGAKILSLDMTTIEALSALSNF 890
            ++ S+         E ++   ET++     +  M    C AK L+L M  IE LS +   
Sbjct: 294  YQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAA 353

Query: 889  LVYSPPPFYNLEYVKVPHGYSESCMSTNLKKYLL 788
            L   P PF NL+Y+K+   + +  +  ++  Y L
Sbjct: 354  LDKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFL 387


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