BLASTX nr result
ID: Cnidium21_contig00021976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00021976 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] 306 4e-81 ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi... 303 3e-80 ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi... 292 6e-77 ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar... 258 1e-66 dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana] 258 1e-66 >emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] Length = 773 Score = 306 bits (783), Expect = 4e-81 Identities = 156/262 (59%), Positives = 200/262 (76%), Gaps = 5/262 (1%) Frame = -2 Query: 777 LDEALHLIESNPTS--LNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLL 604 LDEAL LIES P+ P+++A + FLHSCIS+K+L HGQRLYLQLLL +++ + NLL Sbjct: 46 LDEALRLIESWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLL 105 Query: 603 QNPIIKSKLITLYTVCGEIDEARRVFDDGKSS---DEAVWVAMAIGYSRKGLFRESLELY 433 NP +K KLITL++VCG +DEARRVF+DG E+VWVAM IGYSR G +E+L LY Sbjct: 106 NNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLY 165 Query: 432 CEMLGQCVWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHC 253 EM+ Q NF FS ALKACS+LG++ GR VHAQ++KA ++ DQVV N+LLRLY+ Sbjct: 166 YEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSED 225 Query: 252 GCFDDVVKLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVL 73 GCF++ +++FD MP RN+V+WNSLI GLVK+ +FEA + FR MQ +G GFSWVTLTT+L Sbjct: 226 GCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTIL 285 Query: 72 SACAKVTAIYSGKEVHAQIVKS 7 CA+VTA+ SGKE+HA IVKS Sbjct: 286 PVCARVTALGSGKEIHAVIVKS 307 Score = 100 bits (250), Expect = 3e-19 Identities = 62/218 (28%), Positives = 111/218 (50%) Frame = -2 Query: 714 AYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTVCGEIDEAR 535 A+S L +C L G+ ++ Q+L + Q ++ + L+ LY+ G +EA Sbjct: 179 AFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQ------VVNNALLRLYSEDGCFEEAL 232 Query: 534 RVFDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTALKACSELG 355 R+FD + W ++ G +K E++E + M G+ + S +T L C+ + Sbjct: 233 RMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 292 Query: 354 EVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHCGCFDDVVKLFDEMPQRNVVTWNSLID 175 +G G+ +HA IVK+ + D V NSL+ +Y CG D ++F+ M +++ +WN+LI Sbjct: 293 ALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLIT 352 Query: 174 GLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVLSACA 61 G G++ EA + F++M G +T +LS C+ Sbjct: 353 GYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 390 >ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330 [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 303 bits (776), Expect = 3e-80 Identities = 156/262 (59%), Positives = 198/262 (75%), Gaps = 5/262 (1%) Frame = -2 Query: 777 LDEALHLIESNPTS--LNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLL 604 LDEAL LIE P+ P+++A + FLHSCIS+K+L HGQRLYLQLLL +++ + NLL Sbjct: 47 LDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLL 106 Query: 603 QNPIIKSKLITLYTVCGEIDEARRVFDDGKSS---DEAVWVAMAIGYSRKGLFRESLELY 433 NP +K KLITL++VC +DEARRVF+DG E+VWVAM IGYSR G +E+L LY Sbjct: 107 NNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLY 166 Query: 432 CEMLGQCVWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHC 253 EM+ Q NF FS ALKACS+LG++ GR VHAQ++KA ++ DQVV N+LLRLY+ Sbjct: 167 YEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSED 226 Query: 252 GCFDDVVKLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVL 73 GCFD+ +++FD MP RNVV+WNSLI GLVK+ +FEA + FR MQ +G GFSWVTLTT+L Sbjct: 227 GCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTIL 286 Query: 72 SACAKVTAIYSGKEVHAQIVKS 7 CA+VTA+ SGKE+HA IVKS Sbjct: 287 PVCARVTALGSGKEIHAVIVKS 308 Score = 104 bits (259), Expect = 2e-20 Identities = 64/218 (29%), Positives = 111/218 (50%) Frame = -2 Query: 714 AYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTVCGEIDEAR 535 A+S L +C L G+ ++ Q+L + Q ++ + L+ LY+ G DEA Sbjct: 180 AFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQ------VVNNALLRLYSEDGCFDEAL 233 Query: 534 RVFDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTALKACSELG 355 RVFD + W ++ G +K E++E + M G+ + S +T L C+ + Sbjct: 234 RVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 293 Query: 354 EVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHCGCFDDVVKLFDEMPQRNVVTWNSLID 175 +G G+ +HA IVK+ + D V NSL+ +Y CG D ++F+ M +++ +WN+LI Sbjct: 294 ALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLIT 353 Query: 174 GLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVLSACA 61 G G++ EA + F++M G +T +LS C+ Sbjct: 354 GYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 391 >ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330-like [Glycine max] Length = 650 Score = 292 bits (747), Expect = 6e-77 Identities = 153/262 (58%), Positives = 196/262 (74%), Gaps = 5/262 (1%) Frame = -2 Query: 777 LDEALHLIESN-PTSLNEPNID-AYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLL 604 LD+AL LIES+ PT + E + + S FLH+CIS++SL HG++L+L LL S+N+ +L Sbjct: 49 LDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLHLLRSQNR----VL 104 Query: 603 QNPIIKSKLITLYTVCGEIDEARRVF--DDGKSSDEAVWVAMAIGYSRKGLFRESLELYC 430 +NP +K+KLITLY+VCG ++EARRVF DD K +E VWVAMAIGYSR G E+L LY Sbjct: 105 ENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYR 164 Query: 429 EMLGQCVWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAG-DEVDQVVFNSLLRLYNHC 253 +ML CV P NF FS ALKACS+L +GR +HAQIVK E DQVV N+LL LY Sbjct: 165 DMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEI 224 Query: 252 GCFDDVVKLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVL 73 GCFD+V+K+F+EMPQRNVV+WN+LI G +G++FE FR MQ EG GFSW+TLTT+L Sbjct: 225 GCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTML 284 Query: 72 SACAKVTAIYSGKEVHAQIVKS 7 CA+VTA++SGKE+H QI+KS Sbjct: 285 PVCAQVTALHSGKEIHGQILKS 306 Score = 99.8 bits (247), Expect = 6e-19 Identities = 64/257 (24%), Positives = 122/257 (47%) Frame = -2 Query: 771 EALHLIESNPTSLNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPI 592 EAL L + +P A+S L +C + G+ ++ Q++ H + + Sbjct: 158 EALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIV-----KHDVGEADQV 212 Query: 591 IKSKLITLYTVCGEIDEARRVFDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQC 412 + + L+ LY G DE +VF++ + W + G++ +G E+L + M + Sbjct: 213 VNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREG 272 Query: 411 VWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHCGCFDDVV 232 + S +T L C+++ + G+ +H QI+K+ D + NSL+ +Y CG Sbjct: 273 MGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCE 332 Query: 231 KLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVLSACAKVT 52 K+FD M +++ +WN+++ G GQ+ EA LF +M G + +T +LS C+ Sbjct: 333 KVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSG 392 Query: 51 AIYSGKEVHAQIVKSCG 1 GK + + +++ G Sbjct: 393 LTSEGKRLFSNVMQDFG 409 >ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 710 Score = 258 bits (659), Expect = 1e-66 Identities = 139/263 (52%), Positives = 184/263 (69%), Gaps = 6/263 (2%) Frame = -2 Query: 777 LDEALHLIE---SNPTSLNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNL 607 LDEA+ LIE S+P++L+ P +AY+ LH+CIS KSLHHG ++ +L + + H Sbjct: 111 LDEAVTLIENSSSSPSNLSTP--EAYTDLLHACISAKSLHHGIKICSLILNNPSLRH--- 165 Query: 606 LQNPIIKSKLITLYTVCGEIDEARRVFDDGKSSD---EAVWVAMAIGYSRKGLFRESLEL 436 NP + SKLITL++VC +D AR++FDD S E VW AMAIGYSR G R++L + Sbjct: 166 --NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 223 Query: 435 YCEMLGQCVWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNH 256 Y +ML + P NF S ALKAC +L ++ +GR +HAQIVK ++VDQVV+N LL+LY Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283 Query: 255 CGCFDDVVKLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTV 76 G FDD K+FD M +RNVVTWNSLI L K+ ++ E F LFRKMQ E GFSW TLTT+ Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343 Query: 75 LSACAKVTAIYSGKEVHAQIVKS 7 L AC++V A+ +GKE+HAQI+KS Sbjct: 344 LPACSRVAALLTGKEIHAQILKS 366 Score = 104 bits (259), Expect = 2e-20 Identities = 63/226 (27%), Positives = 111/226 (49%) Frame = -2 Query: 738 SLNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTV 559 S EP + S L +C+ K L G+ ++ Q++ K K Q ++ + L+ LY Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ------VVYNVLLKLYME 283 Query: 558 CGEIDEARRVFDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTA 379 G D+AR+VFD + W ++ S+K E L+ +M + + S +T Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343 Query: 378 LKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHCGCFDDVVKLFDEMPQRNV 199 L ACS + + G+ +HAQI+K+ ++ D + NSL+ +Y CG + ++FD M +++ Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403 Query: 198 VTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVLSACA 61 +WN +++ G + E LF M G +T +LS C+ Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449 Score = 63.5 bits (153), Expect = 5e-08 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 3/189 (1%) Frame = -2 Query: 708 SSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTVCGEIDEARRV 529 ++ L +C +L G+ ++ Q+L SK K LL + L+ +Y CGE++ +RRV Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS------LMDMYGKCGEVEYSRRV 394 Query: 528 FDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTALKACSELGEV 349 FD + D A W M Y+ G E + L+ M+ V P F L CS+ G Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454 Query: 348 GIGRMVHAQIVKAGDEVDQVV--FNSLLRLYNHCGCFDDVVKLFDEMP-QRNVVTWNSLI 178 G + + +K V + + L+ + G + VK+ + MP + + W SL+ Sbjct: 455 EYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513 Query: 177 DGLVKRGQL 151 + G + Sbjct: 514 NSCRLHGNV 522 >dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana] Length = 717 Score = 258 bits (659), Expect = 1e-66 Identities = 139/263 (52%), Positives = 184/263 (69%), Gaps = 6/263 (2%) Frame = -2 Query: 777 LDEALHLIE---SNPTSLNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNL 607 LDEA+ LIE S+P++L+ P +AY+ LH+CIS KSLHHG ++ +L + + H Sbjct: 118 LDEAVTLIENSSSSPSNLSTP--EAYTDLLHACISAKSLHHGIKICSLILNNPSLRH--- 172 Query: 606 LQNPIIKSKLITLYTVCGEIDEARRVFDDGKSSD---EAVWVAMAIGYSRKGLFRESLEL 436 NP + SKLITL++VC +D AR++FDD S E VW AMAIGYSR G R++L + Sbjct: 173 --NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 230 Query: 435 YCEMLGQCVWPSNFGFSTALKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNH 256 Y +ML + P NF S ALKAC +L ++ +GR +HAQIVK ++VDQVV+N LL+LY Sbjct: 231 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 290 Query: 255 CGCFDDVVKLFDEMPQRNVVTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTV 76 G FDD K+FD M +RNVVTWNSLI L K+ ++ E F LFRKMQ E GFSW TLTT+ Sbjct: 291 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 350 Query: 75 LSACAKVTAIYSGKEVHAQIVKS 7 L AC++V A+ +GKE+HAQI+KS Sbjct: 351 LPACSRVAALLTGKEIHAQILKS 373 Score = 104 bits (259), Expect = 2e-20 Identities = 63/226 (27%), Positives = 111/226 (49%) Frame = -2 Query: 738 SLNEPNIDAYSSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTV 559 S EP + S L +C+ K L G+ ++ Q++ K K Q ++ + L+ LY Sbjct: 237 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ------VVYNVLLKLYME 290 Query: 558 CGEIDEARRVFDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTA 379 G D+AR+VFD + W ++ S+K E L+ +M + + S +T Sbjct: 291 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 350 Query: 378 LKACSELGEVGIGRMVHAQIVKAGDEVDQVVFNSLLRLYNHCGCFDDVVKLFDEMPQRNV 199 L ACS + + G+ +HAQI+K+ ++ D + NSL+ +Y CG + ++FD M +++ Sbjct: 351 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 410 Query: 198 VTWNSLIDGLVKRGQLFEAFKLFRKMQVEGTGFSWVTLTTVLSACA 61 +WN +++ G + E LF M G +T +LS C+ Sbjct: 411 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 456 Score = 63.5 bits (153), Expect = 5e-08 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 3/189 (1%) Frame = -2 Query: 708 SSFLHSCISKKSLHHGQRLYLQLLLSKNKTHQNLLQNPIIKSKLITLYTVCGEIDEARRV 529 ++ L +C +L G+ ++ Q+L SK K LL + L+ +Y CGE++ +RRV Sbjct: 348 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS------LMDMYGKCGEVEYSRRV 401 Query: 528 FDDGKSSDEAVWVAMAIGYSRKGLFRESLELYCEMLGQCVWPSNFGFSTALKACSELGEV 349 FD + D A W M Y+ G E + L+ M+ V P F L CS+ G Sbjct: 402 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 461 Query: 348 GIGRMVHAQIVKAGDEVDQVV--FNSLLRLYNHCGCFDDVVKLFDEMP-QRNVVTWNSLI 178 G + + +K V + + L+ + G + VK+ + MP + + W SL+ Sbjct: 462 EYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 520 Query: 177 DGLVKRGQL 151 + G + Sbjct: 521 NSCRLHGNV 529