BLASTX nr result

ID: Cnidium21_contig00021937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021937
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42399.1| unknown [Lotus japonicus]                              239   9e-61
ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   236   4e-60
ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   235   1e-59
ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   233   6e-59
ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   229   7e-58

>gb|AFK42399.1| unknown [Lotus japonicus]
          Length = 214

 Score =  239 bits (609), Expect = 9e-61
 Identities = 128/204 (62%), Positives = 146/204 (71%)
 Frame = -3

Query: 804 NFLPTLLSPSPKKQNLWTSNIISIALAITTFTSPLPSLAIXXXXXXXXXXXXXXXXSQAN 625
           N +P L + +P     +  N++S+ALA+T  TSPLPS AI                SQA 
Sbjct: 13  NTIPKLKTINPSIGTKFLPNLLSLALAVT-LTSPLPSSAIPSLNSQPPSTSLTTPFSQAK 71

Query: 624 NLPTGLDNGTIRACPSTNPSCISTNPKSSSSAFPWLISQKASEDNPAQQLFEAILETQKN 445
           NL  GL+NG IR CPS NP CIS+NPKSSS AFPWLI +  S DNP Q+L EAIL+TQKN
Sbjct: 72  NLKVGLENGKIRTCPSINPGCISSNPKSSSFAFPWLIPEN-SLDNPIQKLREAILKTQKN 130

Query: 444 VKIETVEHTPTGDYLQAEVDGNFGRDVLEFLVKGDVVAYRAMATKVTYVYPFTTALGDSK 265
           VK   VE TP G Y+QAEVD  F RDVLEFLVKG+VVAYR MATKVTYVYPFTTA GDSK
Sbjct: 131 VKFLLVEDTPDGQYMQAEVDAGFDRDVLEFLVKGEVVAYRCMATKVTYVYPFTTAFGDSK 190

Query: 264 GQEERLKKIVDQLGWYAPTLESME 193
           GQE RLK+I DQLGWYAP+ +SME
Sbjct: 191 GQEARLKQINDQLGWYAPSFDSME 214


>ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 223

 Score =  236 bits (603), Expect = 4e-60
 Identities = 135/240 (56%), Positives = 161/240 (67%), Gaps = 2/240 (0%)
 Frame = -3

Query: 906 LSLSTQLLIPFSRTSRFNSSSPLITTTSTHHPVVN--FLPTLLSPSPKKQNLWTSNIISI 733
           +SL + LL P + +S  N++ P + TT T + V+    LP               N++S+
Sbjct: 1   MSLMSSLLPPLASSSYINTA-PKLKTTHTPNLVLGQRVLP---------------NLLSL 44

Query: 732 ALAITTFTSPLPSLAIXXXXXXXXXXXXXXXXSQANNLPTGLDNGTIRACPSTNPSCIST 553
           ALA+T   SPLPS AI                SQ+ NL  GL+NG IR CPS NP CIST
Sbjct: 45  ALAVT-LASPLPSHAIPSLNSQPPPISLTTPFSQSKNLELGLENGKIRPCPSINPGCIST 103

Query: 552 NPKSSSSAFPWLISQKASEDNPAQQLFEAILETQKNVKIETVEHTPTGDYLQAEVDGNFG 373
           NPKSSS +FPWLI   +S+D   Q+L EAIL+TQKNVK + VE TP G YLQAEVDG FG
Sbjct: 104 NPKSSSFSFPWLIPSNSSDD-AIQKLREAILKTQKNVKFQPVEDTPDGQYLQAEVDGGFG 162

Query: 372 RDVLEFLVKGDVVAYRAMATKVTYVYPFTTALGDSKGQEERLKKIVDQLGWYAPTLESME 193
           RD+LEFLVKGDVVAYR +A KVTYVYPFTTA GDSKGQE RLK+I DQLGWYAP+ +SME
Sbjct: 163 RDILEFLVKGDVVAYRCVAMKVTYVYPFTTAFGDSKGQEARLKQINDQLGWYAPSFDSME 222


>ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449474267|ref|XP_004154123.1|
           PREDICTED: thylakoid lumenal 17.9 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449503674|ref|XP_004162120.1| PREDICTED: thylakoid
           lumenal 17.9 kDa protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score =  235 bits (599), Expect = 1e-59
 Identities = 132/240 (55%), Positives = 162/240 (67%), Gaps = 1/240 (0%)
 Frame = -3

Query: 909 SLSLSTQLLIPFSRTSRFNSSSPLITTTSTHHPV-VNFLPTLLSPSPKKQNLWTSNIISI 733
           SL     L+ P+ +    N +         H PV V  + TL + + K   ++ S+++S 
Sbjct: 3   SLQFRPPLVSPWKKKDNNNKNQ-------YHSPVSVPSMSTLQNANHKP--IFLSHLLSF 53

Query: 732 ALAITTFTSPLPSLAIXXXXXXXXXXXXXXXXSQANNLPTGLDNGTIRACPSTNPSCIST 553
           AL+IT  +SP PS+AI                SQ+ NLPTGL+NG I  CPS NPSC+ST
Sbjct: 54  ALSIT-LSSPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVST 112

Query: 552 NPKSSSSAFPWLISQKASEDNPAQQLFEAILETQKNVKIETVEHTPTGDYLQAEVDGNFG 373
           NPKSSS AFP  I    S  NP Q+L EAILETQ+N KI+ VE TP G YL+AEVDGNFG
Sbjct: 113 NPKSSSFAFPLNIPDNFS-GNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFG 171

Query: 372 RDVLEFLVKGDVVAYRAMATKVTYVYPFTTALGDSKGQEERLKKIVDQLGWYAPTLESME 193
           RDV+EFLV+GDV AYR MATKVTYVYPFTTALGDSKGQEER++KI+DQL WY+PT +SM+
Sbjct: 172 RDVIEFLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMD 231


>ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis
           vinifera] gi|297734440|emb|CBI15687.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  233 bits (593), Expect = 6e-59
 Identities = 126/221 (57%), Positives = 154/221 (69%), Gaps = 1/221 (0%)
 Frame = -3

Query: 852 SSSPLITTTSTHHPVVNF-LPTLLSPSPKKQNLWTSNIISIALAITTFTSPLPSLAIXXX 676
           S SP ++T ST     +  +PT  S +   +     N++S AL ++  +SPL SLA+   
Sbjct: 8   SPSPPLSTHSTIKASFHLRIPTETSRNSNTRPFLLPNLLSFALTVSLASSPL-SLALPSI 66

Query: 675 XXXXXXXXXXXXXSQANNLPTGLDNGTIRACPSTNPSCISTNPKSSSSAFPWLISQKASE 496
                        SQ+ NL  GL+NG IR CPS NP C+STNPKSSS AFP  I +K S 
Sbjct: 67  NSQSSLLPPTTPFSQSKNLQVGLENGKIRPCPSINPGCVSTNPKSSSFAFPLTIPEKYS- 125

Query: 495 DNPAQQLFEAILETQKNVKIETVEHTPTGDYLQAEVDGNFGRDVLEFLVKGDVVAYRAMA 316
           DN  Q+L E IL+TQ+N KI+ VE TP G YL+AEVDG FGRD++EFLVKGDVVAYR MA
Sbjct: 126 DNAVQKLQETILKTQRNAKIQVVEDTPDGQYLRAEVDGGFGRDIMEFLVKGDVVAYRTMA 185

Query: 315 TKVTYVYPFTTALGDSKGQEERLKKIVDQLGWYAPTLESME 193
           TKVTYVYPFTTALGDSKGQEER+KKI+D LGWYAP+L+SM+
Sbjct: 186 TKVTYVYPFTTALGDSKGQEERMKKIIDLLGWYAPSLDSMD 226


>ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 221

 Score =  229 bits (584), Expect = 7e-58
 Identities = 121/185 (65%), Positives = 137/185 (74%)
 Frame = -3

Query: 747 NIISIALAITTFTSPLPSLAIXXXXXXXXXXXXXXXXSQANNLPTGLDNGTIRACPSTNP 568
           N++S+ALA+T   SPLPS AI                SQ+ NL  GL+NG IR CPS NP
Sbjct: 38  NLLSLALAVT-LASPLPSYAIPSLNSQSPPISFTTPFSQSKNLELGLENGKIRPCPSINP 96

Query: 567 SCISTNPKSSSSAFPWLISQKASEDNPAQQLFEAILETQKNVKIETVEHTPTGDYLQAEV 388
            CISTNPKSSS AFPWLI    S D+  Q+L EAIL+TQKNVK + VE +P G YLQAEV
Sbjct: 97  GCISTNPKSSSFAFPWLIPSN-SLDDAIQKLREAILKTQKNVKFQPVEDSPDGQYLQAEV 155

Query: 387 DGNFGRDVLEFLVKGDVVAYRAMATKVTYVYPFTTALGDSKGQEERLKKIVDQLGWYAPT 208
           DG FGRDV+EFLVKGDVVAYR +A KVTYVYPFTTALGDSKGQE RLK+I D LGWYAP+
Sbjct: 156 DGGFGRDVIEFLVKGDVVAYRCVAMKVTYVYPFTTALGDSKGQEARLKQINDHLGWYAPS 215

Query: 207 LESME 193
            +SME
Sbjct: 216 FDSME 220


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