BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021884
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   505   e-140
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]       502   e-140
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   500   e-139
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   500   e-139
ref|XP_002310209.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139

>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  505 bits (1301), Expect = e-140
 Identities = 257/293 (87%), Positives = 265/293 (90%)
 Frame = -2

Query: 1153 QFGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAV 974
            QFG LPVMPVQAMTQQATRHARRVYVGGLPP+ANEQSVATFFS VM+AI GNTAGPGDAV
Sbjct: 182  QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 241

Query: 973  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 794
            VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN
Sbjct: 242  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 301

Query: 793  PNLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETG 614
            PNLNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETG
Sbjct: 302  PNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETG 361

Query: 613  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQAKPEQESVLLHAQQQI 434
            NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGT Q KPEQE+VLLHAQQQI
Sbjct: 362  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQENVLLHAQQQI 421

Query: 433  ALQRLMLQQPPAPIGIASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFG 275
            ALQRLMLQ  P    + +KV+CLTQVVT           DIL DM+TE GKFG
Sbjct: 422  ALQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFG 474


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score =  502 bits (1293), Expect(2) = e-140
 Identities = 258/292 (88%), Positives = 265/292 (90%)
 Frame = -2

Query: 1153 QFGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAV 974
            Q G LPVMPVQAMTQQATRHARRVYVGGLPP+ANEQSVATFFSHVMSAI GNTAGPGDAV
Sbjct: 216  QLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGDAV 275

Query: 973  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 794
            VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN
Sbjct: 276  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 335

Query: 793  PNLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETG 614
            PNLNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETG
Sbjct: 336  PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETG 395

Query: 613  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQAKPEQESVLLHAQQQI 434
            NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG TQ KPEQESVLLHAQQQI
Sbjct: 396  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGVTQPKPEQESVLLHAQQQI 455

Query: 433  ALQRLMLQQPPAPIGIASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKF 278
            ALQ+LMLQ    P  +A+KVLCLTQVV+           DIL DM+ ECGKF
Sbjct: 456  ALQKLMLQ----PGTLATKVLCLTQVVSADELRDDEDYADILEDMRLECGKF 503



 Score = 25.4 bits (54), Expect(2) = e-140
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 1239 MFPNMFSLTTGQ 1204
            +FPNMFSL TGQ
Sbjct: 205  VFPNMFSLPTGQ 216


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223535572|gb|EEF37240.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 549

 Score =  500 bits (1288), Expect(2) = e-139
 Identities = 257/292 (88%), Positives = 264/292 (90%)
 Frame = -2

Query: 1153 QFGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAV 974
            QFG LPVMPVQAMTQQATRHARRVYVGGLPP+ANEQSVATFFSHVM+AI GNTAGPGDAV
Sbjct: 235  QFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAV 294

Query: 973  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 794
            VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN
Sbjct: 295  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 354

Query: 793  PNLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETG 614
            PNLNLGAVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETG
Sbjct: 355  PNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 414

Query: 613  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQAKPEQESVLLHAQQQI 434
            NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG  Q KPEQE+VLLHAQQQI
Sbjct: 415  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQETVLLHAQQQI 474

Query: 433  ALQRLMLQQPPAPIGIASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKF 278
            ALQRLMLQ  P      +KV+CLTQVVT           DIL DM+TE GKF
Sbjct: 475  ALQRLMLQPVP------TKVVCLTQVVTADELKDDDEYEDILEDMRTEGGKF 520



 Score = 24.6 bits (52), Expect(2) = e-139
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 1239 MFPNMFSLTTGQ 1204
            MFPNMF L TGQ
Sbjct: 223  MFPNMFPLGTGQ 234


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  500 bits (1288), Expect(2) = e-139
 Identities = 255/299 (85%), Positives = 267/299 (89%)
 Frame = -2

Query: 1153 QFGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAV 974
            QFG LPVMP+QAMTQQATRHARRVYVGGLP  ANEQSVATFFSHVMSAI GNTAGPGDAV
Sbjct: 218  QFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAV 277

Query: 973  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 794
            VNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQPN
Sbjct: 278  VNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPN 337

Query: 793  PNLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETG 614
            PNLNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETG
Sbjct: 338  PNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 397

Query: 613  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQAKPEQESVLLHAQQQI 434
            NSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRRANQGTTQ KPEQESVLLHAQQQI
Sbjct: 398  NSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQI 457

Query: 433  ALQRLMLQQPPAPIGIASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDFEHTI 257
            ALQRLMLQ    P  +A+KVL LT+V++           DIL DM+TECGKFG   + +
Sbjct: 458  ALQRLMLQ----PATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVV 512



 Score = 23.9 bits (50), Expect(2) = e-139
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 1239 MFPNMFSLTTGQ 1204
            MFPNMF L +GQ
Sbjct: 207  MFPNMFPLASGQ 218


>ref|XP_002310209.1| predicted protein [Populus trichocarpa] gi|222853112|gb|EEE90659.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  499 bits (1285), Expect(2) = e-139
 Identities = 255/299 (85%), Positives = 265/299 (88%)
 Frame = -2

Query: 1153 QFGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAV 974
            QFG LPVMPVQAMTQQATRHARRVYVGGLPP ANEQSVATFFS VM+AI GNTAGPGDAV
Sbjct: 39   QFGALPVMPVQAMTQQATRHARRVYVGGLPPIANEQSVATFFSQVMAAIGGNTAGPGDAV 98

Query: 973  VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 794
            VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN
Sbjct: 99   VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 158

Query: 793  PNLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETG 614
            PNLNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFG LRGFDLVKDRETG
Sbjct: 159  PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGALRGFDLVKDRETG 218

Query: 613  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQAKPEQESVLLHAQQQI 434
            NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGT Q KPEQE+VLLHAQQQI
Sbjct: 219  NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQENVLLHAQQQI 278

Query: 433  ALQRLMLQQPPAPIGIASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDFEHTI 257
            ALQRLMLQ PP    + +KV+CLTQVVT           DIL D++ E GKFG   + +
Sbjct: 279  ALQRLMLQPPP----VVTKVVCLTQVVTVDELKDDDEYEDILEDIRMEAGKFGQLVNVV 333



 Score = 24.6 bits (52), Expect(2) = e-139
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 1239 MFPNMFSLTTGQ 1204
            MFPNMF L TGQ
Sbjct: 27   MFPNMFPLGTGQ 38