BLASTX nr result

ID: Cnidium21_contig00021831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021831
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524560.1| RNA binding protein, putative [Ricinus commu...   140   1e-31
emb|CBI28491.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249...   134   1e-29
ref|XP_002320541.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816...   130   1e-28

>ref|XP_002524560.1| RNA binding protein, putative [Ricinus communis]
           gi|223536113|gb|EEF37768.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 929

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/104 (65%), Positives = 82/104 (78%)
 Frame = -3

Query: 314 STSSVDEEYLLRQDDQRSFARGSAYPQKEPRAHHSSHNPSYSNKSKIEDKNVEPSEVLWI 135
           S  S DE+YL R+D+QRS  +GS + Q++ R   +S  P Y++KSK+ DK+ EPSEVLWI
Sbjct: 128 SVPSRDEDYLQRRDEQRSAMKGSPFSQRDSRLRAASPEPFYADKSKVSDKSAEPSEVLWI 187

Query: 134 GFPAVLKVDETNLRKAFSPFGEIVNITAFPGRSYAFVRFRNVMS 3
           GFPA+LKVDE  LRKAFSPFG+I  IT FPGRSYAFVRFRNVMS
Sbjct: 188 GFPALLKVDEMILRKAFSPFGDIEKITVFPGRSYAFVRFRNVMS 231


>emb|CBI28491.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/102 (63%), Positives = 80/102 (78%)
 Frame = -3

Query: 314 STSSVDEEYLLRQDDQRSFARGSAYPQKEPRAHHSSHNPSYSNKSKIEDKNVEPSEVLWI 135
           ST+S DE+YL R+D+QRS  RGS + Q++ R  H S +  Y +KS I D+  EP EVLWI
Sbjct: 501 STASRDEDYLQRRDEQRSTIRGSPFSQRDSRTRHGSPDTFYPDKSSISDRKGEPCEVLWI 560

Query: 134 GFPAVLKVDETNLRKAFSPFGEIVNITAFPGRSYAFVRFRNV 9
           GFP++LKVDET LRKAFSPFGEI  IT+FPGRSYAFV+FR+V
Sbjct: 561 GFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFRSV 602


>ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249524 [Vitis vinifera]
          Length = 953

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/102 (63%), Positives = 80/102 (78%)
 Frame = -3

Query: 314 STSSVDEEYLLRQDDQRSFARGSAYPQKEPRAHHSSHNPSYSNKSKIEDKNVEPSEVLWI 135
           ST+S DE+YL R+D+QRS  RGS + Q++ R  H S +  Y +KS I D+  EP EVLWI
Sbjct: 130 STASRDEDYLQRRDEQRSTIRGSPFSQRDSRTRHGSPDTFYPDKSSISDRKGEPCEVLWI 189

Query: 134 GFPAVLKVDETNLRKAFSPFGEIVNITAFPGRSYAFVRFRNV 9
           GFP++LKVDET LRKAFSPFGEI  IT+FPGRSYAFV+FR+V
Sbjct: 190 GFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFRSV 231


>ref|XP_002320541.1| predicted protein [Populus trichocarpa] gi|222861314|gb|EEE98856.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/104 (62%), Positives = 78/104 (75%)
 Frame = -3

Query: 314 STSSVDEEYLLRQDDQRSFARGSAYPQKEPRAHHSSHNPSYSNKSKIEDKNVEPSEVLWI 135
           ST S DE+YL R+D+QR   RGS + Q++ R  ++S    Y +KSK+ D + EPSEVLWI
Sbjct: 84  STPSHDEDYLQRRDEQRLTLRGSPFLQRDSRVRNASPETFYPDKSKMSDNSAEPSEVLWI 143

Query: 134 GFPAVLKVDETNLRKAFSPFGEIVNITAFPGRSYAFVRFRNVMS 3
           GFPA+LKVDE  LRKAFSPFGEI  IT FPGRSYAFVRF N+ S
Sbjct: 144 GFPALLKVDEMILRKAFSPFGEIEKITVFPGRSYAFVRFTNLTS 187


>ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816831 [Glycine max]
          Length = 934

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/99 (65%), Positives = 77/99 (77%)
 Frame = -3

Query: 299 DEEYLLRQDDQRSFARGSAYPQKEPRAHHSSHNPSYSNKSKIEDKNVEPSEVLWIGFPAV 120
           DE+Y    D++ S  RGS + Q+E R +H S  P YS+KSK+ DKN EPSEVLWIGFPA 
Sbjct: 124 DEDY--SWDERNSILRGSPFSQREFRGYHGSPEPHYSDKSKLGDKNPEPSEVLWIGFPAQ 181

Query: 119 LKVDETNLRKAFSPFGEIVNITAFPGRSYAFVRFRNVMS 3
           LKV+E+ LRKAFSPFGEIV IT FPGRSYAFVRFR++ S
Sbjct: 182 LKVEESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTS 220


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