BLASTX nr result

ID: Cnidium21_contig00021819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021819
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   328   9e-88
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   322   7e-86
ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase...   316   3e-84
ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase...   316   3e-84
emb|CBI25238.3| unnamed protein product [Vitis vinifera]              316   4e-84

>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  328 bits (840), Expect = 9e-88
 Identities = 175/243 (72%), Positives = 191/243 (78%), Gaps = 17/243 (6%)
 Frame = -1

Query: 679 NFNNITLFSSFKSPNLITRFS--------------FNNIKTSISFPLLVRS-NSPKNENE 545
           NF+N TL SS  S +  + FS              F    TS   P  +R+ NS  N+N 
Sbjct: 5   NFHN-TLLSSSSSSSYSSSFSPLSPFLKPPNALRFFTKFSTS---PFSLRALNSSNNDNP 60

Query: 544 T--QVPQPEVPKKLSKQSSWEAKDSEGNDYLYRLGKESDNMNIAVGARAGVIDDLFTGQF 371
           T          +++S+QSSWEAKDSEG DYLYRLGKE+DNMNIAVGARAG+IDDLF G F
Sbjct: 61  TGESAGGEAGQRRISEQSSWEAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNF 120

Query: 370 LGRDSDIVFDYRQTVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYIAHLLNVRVPLILGIW 191
           LGRDSDIVFDYRQ VTRSFEYLQGDYYIAP FMDKVVCHIVKNYIAHLLN  VPLILGIW
Sbjct: 121 LGRDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTNVPLILGIW 180

Query: 190 GGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNKGKMS 11
           GGKGQGKSFQTELIFQAMG+EPVIMSAGELESERAGEPG+LIR+RYRTASQVVQN+GKMS
Sbjct: 181 GGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMS 240

Query: 10  CLM 2
           CLM
Sbjct: 241 CLM 243


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  322 bits (824), Expect = 7e-86
 Identities = 168/229 (73%), Positives = 187/229 (81%), Gaps = 7/229 (3%)
 Frame = -1

Query: 667 ITLFSSFKSPNLITRFSFNNIKTSISFPLLVR-SNSPKNENETQVP-----QPEVPKK-L 509
           + LF++  S  L T+  F + K    F + V  S SP     +  P     + E PK+ L
Sbjct: 1   MALFNTPSSSLLQTQNFFTSPKKISPFLITVSCSKSPSQPTSSPSPVDDNSENEEPKRRL 60

Query: 508 SKQSSWEAKDSEGNDYLYRLGKESDNMNIAVGARAGVIDDLFTGQFLGRDSDIVFDYRQT 329
           S+QSSWEAKDSEG DYLYRLGKE+DNMNIAVGARAGV+D LF G FLG+DSDIVFDYRQ 
Sbjct: 61  SQQSSWEAKDSEGKDYLYRLGKEADNMNIAVGARAGVVDSLFAGNFLGKDSDIVFDYRQK 120

Query: 328 VTRSFEYLQGDYYIAPAFMDKVVCHIVKNYIAHLLNVRVPLILGIWGGKGQGKSFQTELI 149
           VTRSFEYLQGDYYIAP F+DKVVCHIVKNY+AH LNV+VPLILGIWGGKGQGKSFQTELI
Sbjct: 121 VTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLAHRLNVKVPLILGIWGGKGQGKSFQTELI 180

Query: 148 FQAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNKGKMSCLM 2
           FQ +GVEPVIMSAGELESERAGEPGRLIR+RYRTASQVVQN+GKMSCLM
Sbjct: 181 FQTLGVEPVIMSAGELESERAGEPGRLIRERYRTASQVVQNQGKMSCLM 229


>ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 427

 Score =  316 bits (810), Expect = 3e-84
 Identities = 150/173 (86%), Positives = 166/173 (95%)
 Frame = -1

Query: 520 PKKLSKQSSWEAKDSEGNDYLYRLGKESDNMNIAVGARAGVIDDLFTGQFLGRDSDIVFD 341
           PK+LS+QSSWEAKDSEG DYLYRLG E+DNMNIAVGARAGVIDD+F G FLG+DSDIVFD
Sbjct: 55  PKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDVFAGNFLGKDSDIVFD 114

Query: 340 YRQTVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYIAHLLNVRVPLILGIWGGKGQGKSFQ 161
           YRQ VTR+FE++QGDYYIAP FMDKVVCH+VKN+I HLL+V+VPLILG+WGGKGQGKSFQ
Sbjct: 115 YRQKVTRTFEHIQGDYYIAPTFMDKVVCHLVKNFIVHLLDVKVPLILGVWGGKGQGKSFQ 174

Query: 160 TELIFQAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNKGKMSCLM 2
           TELIFQAMGVEPVIMSAGELESERAGEPG+LIR+RYRTASQVVQN+GKMSCLM
Sbjct: 175 TELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMSCLM 227


>ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 426

 Score =  316 bits (810), Expect = 3e-84
 Identities = 150/173 (86%), Positives = 166/173 (95%)
 Frame = -1

Query: 520 PKKLSKQSSWEAKDSEGNDYLYRLGKESDNMNIAVGARAGVIDDLFTGQFLGRDSDIVFD 341
           PK+LS+QSSWEAKDSEG DYLYRLG E+DNMNIAVGARAGVIDD+F G FLG+DSDIVFD
Sbjct: 55  PKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDVFAGNFLGKDSDIVFD 114

Query: 340 YRQTVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYIAHLLNVRVPLILGIWGGKGQGKSFQ 161
           YRQ VTR+FE++QGDYYIAP FMDKVVCH+VKN+I HLL+V+VPLILG+WGGKGQGKSFQ
Sbjct: 115 YRQKVTRTFEHIQGDYYIAPTFMDKVVCHLVKNFIVHLLDVKVPLILGVWGGKGQGKSFQ 174

Query: 160 TELIFQAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNKGKMSCLM 2
           TELIFQAMGVEPVIMSAGELESERAGEPG+LIR+RYRTASQVVQN+GKMSCLM
Sbjct: 175 TELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMSCLM 227


>emb|CBI25238.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  316 bits (809), Expect = 4e-84
 Identities = 171/243 (70%), Positives = 188/243 (77%), Gaps = 17/243 (6%)
 Frame = -1

Query: 679 NFNNITLFSSFKSPNLITRFS--------------FNNIKTSISFPLLVRS-NSPKNENE 545
           NF+N TL SS  S +  + FS              F    TS   P  +R+ NS  N+N 
Sbjct: 5   NFHN-TLLSSSSSSSYSSSFSPLSPFLKPPNALRFFTKFSTS---PFSLRALNSSNNDNP 60

Query: 544 T--QVPQPEVPKKLSKQSSWEAKDSEGNDYLYRLGKESDNMNIAVGARAGVIDDLFTGQF 371
           T          +++S+QSSWEAKDSEG DYLYRLGKE+DNMNIAVGARAG+IDDLF G F
Sbjct: 61  TGESAGGEAGQRRISEQSSWEAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNF 120

Query: 370 LGRDSDIVFDYRQTVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYIAHLLNVRVPLILGIW 191
           LGRDSDIVFDYRQ VTRSFEYLQGDYYIAP FM   +CHIVKNYIAHLLN  VPLILGIW
Sbjct: 121 LGRDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM--AMCHIVKNYIAHLLNTNVPLILGIW 178

Query: 190 GGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNKGKMS 11
           GGKGQGKSFQTELIFQAMG+EPVIMSAGELESERAGEPG+LIR+RYRTASQVVQN+GKMS
Sbjct: 179 GGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMS 238

Query: 10  CLM 2
           CLM
Sbjct: 239 CLM 241


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