BLASTX nr result

ID: Cnidium21_contig00021816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021816
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   167   6e-40
ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein lig...   166   1e-39
ref|XP_002515036.1| RCC1 and BTB domain-containing protein, puta...   164   5e-39
ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein lig...   164   7e-39
gb|ABA97468.1| regulator of chromosome condensation, putative, e...   164   9e-39

>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  167 bits (424), Expect = 6e-40
 Identities = 78/104 (75%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   LIEQFRTLNIQPXXXXXXXXXXXXXGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVESLS 181
           LIEQF  LN+QP             G DGRVCTWGWGRYGCLGHGNE+CESVPKVVE+LS
Sbjct: 352 LIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALS 411

Query: 182 KVKAVHVATGDYTTFVVSDEGNVYSFGCGESSSLGHNTAAADEQ 313
            VKAVHVATGDYTTFVVSD+G+VYSFGCGES+SLGHN A  DEQ
Sbjct: 412 NVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQ 455


>ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/104 (74%), Positives = 84/104 (80%)
 Frame = +2

Query: 2   LIEQFRTLNIQPXXXXXXXXXXXXXGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVESLS 181
           LIEQF  LN+QP             G DGRVCTWGWGRYGCLGHGNE+CESVPKVVE+LS
Sbjct: 347 LIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALS 406

Query: 182 KVKAVHVATGDYTTFVVSDEGNVYSFGCGESSSLGHNTAAADEQ 313
            VKAVHVATGDYTTFVVSD+G+VYSFGCG+S+SLGHN A  DEQ
Sbjct: 407 NVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQ 450


>ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
           gi|223546087|gb|EEF47590.1| RCC1 and BTB
           domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = +2

Query: 2   LIEQFRTLNIQPXXXXXXXXXXXXXGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVESLS 181
           LIEQF+ LN+QP             G DGRVCTWGWGRYGCLGHGNE+CESVPKVV++LS
Sbjct: 352 LIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALS 411

Query: 182 KVKAVHVATGDYTTFVVSDEGNVYSFGCGESSSLGHNTAAA 304
            +KAVHVATGDYTTFVVS+EG+VYSFGCGES+SLGHN AAA
Sbjct: 412 NIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLGHNAAAA 452


>ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/98 (77%), Positives = 81/98 (82%)
 Frame = +2

Query: 2   LIEQFRTLNIQPXXXXXXXXXXXXXGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVESLS 181
           LIEQF+TLNIQP               DGRVCTWGWGRYGCLGHGNE+CESVPKVVE+L 
Sbjct: 353 LIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALG 412

Query: 182 KVKAVHVATGDYTTFVVSDEGNVYSFGCGESSSLGHNT 295
            VKAVHVATGDYTTFVVSD+G+VYSFGCGESSSLGHNT
Sbjct: 413 SVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNT 450


>gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group] gi|77554673|gb|ABA97469.1|
           regulator of chromosome condensation, putative,
           expressed [Oryza sativa Japonica Group]
           gi|108862485|gb|ABG21962.1| regulator of chromosome
           condensation, putative, expressed [Oryza sativa Japonica
           Group] gi|108862486|gb|ABG21963.1| regulator of
           chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/98 (77%), Positives = 81/98 (82%)
 Frame = +2

Query: 2   LIEQFRTLNIQPXXXXXXXXXXXXXGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVESLS 181
           LIEQF+ LNIQP             G DGRVCTWGWGRYGCLGHGNE+CESVPKVVESL 
Sbjct: 258 LIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLV 317

Query: 182 KVKAVHVATGDYTTFVVSDEGNVYSFGCGESSSLGHNT 295
            V+AVHVATGDYTTFVVSD+G+VYSFGCGESSSLGHNT
Sbjct: 318 NVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNT 355


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