BLASTX nr result

ID: Cnidium21_contig00021807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021807
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568485.1| uncharacterized protein [Arabidopsis thaliana] ...    80   2e-13
gb|AAM64547.1| unknown [Arabidopsis thaliana]                          80   2e-13
ref|XP_002872219.1| hypothetical protein ARALYDRAFT_489488 [Arab...    78   9e-13
ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab...    72   6e-11
ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago ...    70   2e-10

>ref|NP_568485.1| uncharacterized protein [Arabidopsis thaliana]
           gi|14488090|gb|AAK63865.1|AF389293_1 AT5g26741
           [Arabidopsis thaliana] gi|22655444|gb|AAM98314.1|
           At5g26741/At5g26741 [Arabidopsis thaliana]
           gi|332006187|gb|AED93570.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 99

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
 Frame = -1

Query: 367 MSYIPIFRTEMGG------YTE-MEKRAVFLRSYHFSRKQSFSEKIKKSFFRIKKVIRVR 209
           MS   +FR+  GG      Y E MEKR +FLRSY FSRKQSF+EK+ +S  R+K+V+  R
Sbjct: 1   MSEKLVFRSTSGGDYYGAPYGEYMEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTR 60

Query: 208 LRSAKRLRKMVWFRLKNGLCY-KTRFIRL 125
           LRSA +L+++VW RL++   Y + RF RL
Sbjct: 61  LRSAPKLKRVVWSRLRSAFYYRRRRFFRL 89


>gb|AAM64547.1| unknown [Arabidopsis thaliana]
          Length = 99

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
 Frame = -1

Query: 367 MSYIPIFRTEMGG------YTE-MEKRAVFLRSYHFSRKQSFSEKIKKSFFRIKKVIRVR 209
           MS   +FR+  GG      Y E MEKR +FLRSY FSRKQSF+EK+ +S  R+K+V+  R
Sbjct: 1   MSEKLVFRSTSGGDYYGAPYGEYMEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTR 60

Query: 208 LRSAKRLRKMVWFRLKNGLCY-KTRFIRL 125
           LRSA +L+++VW RL++   Y + RF RL
Sbjct: 61  LRSAPKLKRVVWSRLRSAFYYRRRRFFRL 89


>ref|XP_002872219.1| hypothetical protein ARALYDRAFT_489488 [Arabidopsis lyrata subsp.
           lyrata] gi|297318056|gb|EFH48478.1| hypothetical protein
           ARALYDRAFT_489488 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 11/92 (11%)
 Frame = -1

Query: 367 MSYIPIFRTEMGG---------YTE-MEKRAVFLRSYHFSRKQSFSEKIKKSFFRIKKVI 218
           MS   +FR+  GG         Y E MEKR +FLRSY FSRKQSF+EK+ +S  R+K+V+
Sbjct: 1   MSEKLVFRSSSGGDYYGTHGAPYGEYMEKRQLFLRSYQFSRKQSFTEKVSRSVKRVKRVV 60

Query: 217 RVRLRSAKRLRKMVWFRLKNGLCY-KTRFIRL 125
             R RSA++L+++VW RL+    Y + RF RL
Sbjct: 61  LTRFRSARKLKRVVWSRLRTAFFYRRRRFCRL 92


>ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp.
           lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein
           ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
 Frame = -1

Query: 334 GGYTEMEKRAVFLRSYHFSRKQSFSEKIKKSFFRI-KKVIRVRLRSAKRLRKMVWFRLKN 158
           GGY  +EKR +FL+SY FSRKQS +EKIK S  R+ KKV+ +RL+SA+RL+++VW R K 
Sbjct: 20  GGY--VEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKKVVWMRLKSARRLKRVVWSRFKT 77

Query: 157 GLCY-KTRFIRL 125
              Y + RF RL
Sbjct: 78  AFFYRRRRFFRL 89


>ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago truncatula]
           gi|355480329|gb|AES61532.1| hypothetical protein
           MTR_1g085240 [Medicago truncatula]
          Length = 114

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
 Frame = -1

Query: 355 PIFRTEMGGY--------TEMEKRAVFLRSYHFSRKQSFSEKIKKSFFRIKKVIRVRLRS 200
           P+FRTE  GY        T +EKR +FLRSY F RK+S +E+IK S  R KKV+ ++LR 
Sbjct: 8   PLFRTESFGYYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRY 67

Query: 199 AKRL-RKMVWF-RLKNGLCYKTRFIRLQTRDAQKVSTRKSYKSYVTSWPSCLW 47
           A+ L RK+V+F R K G  Y+ R      R +Q ++   S         SCLW
Sbjct: 68  ARGLRRKLVFFPRFKCGFYYRRR------RFSQLLNNSGSSHHRKVDSSSCLW 114


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