BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021801
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31488.3| unnamed protein product [Vitis vinifera]              515   e-143
ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   515   e-143
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   514   e-143
ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [...   505   e-141
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   503   e-140

>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  515 bits (1326), Expect = e-143
 Identities = 246/345 (71%), Positives = 291/345 (84%)
 Frame = -1

Query: 1330 RTIGEPWPELNDGIFYSDRVRPSDSGLTLIEYYSTKYKSSAPLQGWLQRIENGQITVDGT 1151
            +T G PWP+ NDG+ Y+D V  SDS LTLI+YYS+K+K+SAPLQGWLQRI  GQITVDGT
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 1150 IVTDPTKVLSAASELQYHRLPWREPDAPYLLGVLFEDDHLIALNKPSGLQVLPGGLFQHR 971
            +VT+P  +L A S+L YHRLPW+EPDAPYLL +L+EDD +IALNKPSGLQVLPGGLFQ R
Sbjct: 63   VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 970  TVLTQLQWYASKQSSLIPCQEANPVPVHRLGRGTSGILLCAKTKLAKARISAYFADGTSV 791
            TVLTQLQW A+KQ+SL  CQE++ VPVHRLGRGTSGILLCAKTKLAK R++AYFADGTSV
Sbjct: 123  TVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSV 182

Query: 790  VGSSRIEDADISKTRKISKTYRALASGILRENEVIINQPIGMLKYPGVAKGLYVASPSGK 611
            VG +R  D      RKISK YRAL +GIL ++E++I QPIGM++YPGVAKGLYVASPSGK
Sbjct: 183  VGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 242

Query: 610  LALSKVCVLERDIQYNRTLVEVEIQSGRPHQIRIHLSFIGHPLIGDPLYVTGGRPQCFYP 431
             ALSKV +LERD+Q +  +V+VEIQSGRPHQIRIHLSFIGHPL+GDPLYV GG+P+C   
Sbjct: 243  PALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDA 302

Query: 430  ESVEESFAQDGGYQRPLNSVPGDCGYHLHAHRLVFAHPLTNKVTE 296
            E   ES+A DGGYQRP+  VPGDCGYHLHAH+LV +HP TN+ ++
Sbjct: 303  EFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEESD 347


>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  515 bits (1326), Expect = e-143
 Identities = 251/364 (68%), Positives = 300/364 (82%), Gaps = 2/364 (0%)
 Frame = -1

Query: 1327 TIGEPWPELNDGIFYSDRVRPS-DSGLTLIEYYSTKYKSSAPLQGWLQRIENGQITVDGT 1151
            + G PWP+LN+G+FY+D V  S DSGLTLI +YS+KYK+SAPLQGWLQRI NGQIT+DG 
Sbjct: 13   SFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1150 IVTDPTKVLSAASELQYHRLPWREPDAPYLLGVLFEDDHLIALNKPSGLQVLPGGLFQHR 971
            +V +P  +L    EL YHRLPWREPDAPYLL VL+EDD ++ALNKP GLQVLPGGLFQ R
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQR 132

Query: 970  TVLTQLQWYASKQSSLIPCQEANPVPVHRLGRGTSGILLCAKTKLAKARISAYFADGTSV 791
            TVL QLQW ASK SS +  Q ++PVPVHRLGRGTSGILLCAKTK+AK  ++AYFADGTS+
Sbjct: 133  TVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSL 192

Query: 790  VGSSRIEDADISKTRKISKTYRALASGILRENEVIINQPIGMLKYPGVAKGLYVASPSGK 611
            +G S   + + SK RKISK YRAL +GIL ++++II QPIG ++YPGVAKGLYVASPSGK
Sbjct: 193  IGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGK 252

Query: 610  LALSKVCVLERDIQYNRTLVEVEIQSGRPHQIRIHLSFIGHPLIGDPLYVTGGRPQCFYP 431
             ALSKV VLERD Q N+TLV+VEI+SGRPHQIRIHLSFIGHPL+GDPLY  GG+P CF  
Sbjct: 253  PALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDS 312

Query: 430  ESVEESFAQDGGYQRPLNSVPGDCGYHLHAHRLVFAHPLTN-KVTEIIAPLPSILQTPEE 254
            E  +ESFA+DGGY+RP   VPGDCGY+LHAH+LV +HP  N +V +I APLPSIL+T  E
Sbjct: 313  EHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAE 372

Query: 253  SKEI 242
            ++E+
Sbjct: 373  TEEL 376


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  514 bits (1325), Expect = e-143
 Identities = 250/347 (72%), Positives = 298/347 (85%), Gaps = 2/347 (0%)
 Frame = -1

Query: 1330 RTIGEPWPELNDGIFYSDRVRPSDSGLTLIEYYSTKYKSSAPLQGWLQRIENGQITVDGT 1151
            +T G PWP+ NDG+ Y+D V  SDS LTLI+YYS+K+K+SAPLQGWLQRI  GQITVDGT
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 1150 IVTDPTKVLSAASELQYHRLPWREPDAPYLLGVLFEDDHLIALNKPSGLQVLPGGLFQHR 971
            +VT+P  +L A S+L YHRLPW+EPDAPYLL +L+EDD +IALNKPSGLQVLPGGLFQ R
Sbjct: 63   VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 970  TVLTQLQWYASKQSSLIPCQEANPVPVHRLGRGTSGILLCAKTKLAKARISAYFADGTSV 791
            TVLTQLQW A+KQ+SL  CQE++ VPVHRLGRGTSGILLCAKTKLAK R++AYFADGTSV
Sbjct: 123  TVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSV 182

Query: 790  VGSSRIEDADI-SKT-RKISKTYRALASGILRENEVIINQPIGMLKYPGVAKGLYVASPS 617
            VG +R+ DAD+ S+T RKISK YRAL +GIL ++E++I QPIGM++YPGVAKGLYVASPS
Sbjct: 183  VGGNRL-DADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPS 241

Query: 616  GKLALSKVCVLERDIQYNRTLVEVEIQSGRPHQIRIHLSFIGHPLIGDPLYVTGGRPQCF 437
            GK ALSKV +LERD+Q +  +V+VEIQSGRPHQIRIHLSFIGHPL+GDPLYV GG+P+C 
Sbjct: 242  GKPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCC 301

Query: 436  YPESVEESFAQDGGYQRPLNSVPGDCGYHLHAHRLVFAHPLTNKVTE 296
              E   ES+A DGGYQRP+  VPGDCGYHLHAH+LV +HP TN+ ++
Sbjct: 302  DAEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEESD 348


>ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [Glycine max]
          Length = 371

 Score =  505 bits (1301), Expect = e-141
 Identities = 247/363 (68%), Positives = 296/363 (81%)
 Frame = -1

Query: 1330 RTIGEPWPELNDGIFYSDRVRPSDSGLTLIEYYSTKYKSSAPLQGWLQRIENGQITVDGT 1151
            +  G PWPE NDG+ Y D VR SD+G TLIE+YSTKYKSSAPLQGWLQRI++GQITVDG 
Sbjct: 5    KKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITVDGG 64

Query: 1150 IVTDPTKVLSAASELQYHRLPWREPDAPYLLGVLFEDDHLIALNKPSGLQVLPGGLFQHR 971
            +VTD   VL   S+L YHRLPW+EPDAP+++ VL+EDD +IALNKPSGLQVLPGGL+Q R
Sbjct: 65   VVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQR 124

Query: 970  TVLTQLQWYASKQSSLIPCQEANPVPVHRLGRGTSGILLCAKTKLAKARISAYFADGTSV 791
            T+LTQLQW A+ Q +    +  +PVPVHRLGRGTSGILLCAKTKLA+AR++++FADGTS 
Sbjct: 125  TILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSH 184

Query: 790  VGSSRIEDADISKTRKISKTYRALASGILRENEVIINQPIGMLKYPGVAKGLYVASPSGK 611
            VG  R    ++    KI+K YRAL SGI+  ++V INQPIG++KYPGVAKGLYVAS SGK
Sbjct: 185  VGGKRDTKQELG---KIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGK 241

Query: 610  LALSKVCVLERDIQYNRTLVEVEIQSGRPHQIRIHLSFIGHPLIGDPLYVTGGRPQCFYP 431
             ALS V +LE +IQ N TLV+V+IQSGRPHQIRIHLSFIGHPL+GDPLY  GG+P+C   
Sbjct: 242  PALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDC 301

Query: 430  ESVEESFAQDGGYQRPLNSVPGDCGYHLHAHRLVFAHPLTNKVTEIIAPLPSILQTPEES 251
            + V+ESFA+DGGYQRP   VPGDCGY+LHAH+LV +HP TN++ EIIAPLPS L T EE+
Sbjct: 302  DFVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEA 361

Query: 250  KEI 242
            KEI
Sbjct: 362  KEI 364


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  503 bits (1296), Expect = e-140
 Identities = 244/361 (67%), Positives = 297/361 (82%), Gaps = 1/361 (0%)
 Frame = -1

Query: 1330 RTIGEPWPELNDGIFYSDRVRPSDSGLTLIEYYSTKYKSSAPLQGWLQRIENGQITVDGT 1151
            + IG PWPE NDG+ Y D VRPSD+GLTLIE+YSTKYKSSAPLQGWLQRI++ QIT+D  
Sbjct: 5    KKIGIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDAR 64

Query: 1150 IVTDPTKVLSAASELQYHRLPWREPDAPYLLGVLFEDDHLIALNKPSGLQVLPGGLFQHR 971
            +VTDP  +L   S+L YHR+PW+EPDAP+ + VL+EDD +IALNKPSGLQVLPGGLFQ R
Sbjct: 65   VVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQR 124

Query: 970  TVLTQLQWYASKQSSLIPCQEANPVPVHRLGRGTSGILLCAKTKLAKARISAYFADGTSV 791
            TVLTQLQW  + +S++   Q+ +PVPVHRLGRGTSGILLCAKTKLA+AR+++YFADGTS 
Sbjct: 125  TVLTQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSR 184

Query: 790  VGSSRIEDADISKTRKISKTYRALASGILRENEVIINQPIGMLKYPGVAKGLYVASPSGK 611
            +      + ++    KI+K YRAL SGI+  ++V INQPIGM+KYPGVAKGLYVAS SGK
Sbjct: 185  IEGKGHTNQELG---KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGK 241

Query: 610  LALSKVCVLERDIQYNRTLVE-VEIQSGRPHQIRIHLSFIGHPLIGDPLYVTGGRPQCFY 434
             ALS V VLER+++ N TLV+ V+IQSGRPHQIRIHLSFIGHPL+GDPLY  GG+P+C  
Sbjct: 242  PALSVVHVLERNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLD 301

Query: 433  PESVEESFAQDGGYQRPLNSVPGDCGYHLHAHRLVFAHPLTNKVTEIIAPLPSILQTPEE 254
             + ++ESFA+DGGY RP   VPGDCGYHLHAHRL  +HP+TN++ E+IAPLPSILQT EE
Sbjct: 302  CDFLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEE 361

Query: 253  S 251
            +
Sbjct: 362  A 362