BLASTX nr result

ID: Cnidium21_contig00021774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021774
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB60297.1| acetolactate synthase precursor [Xanthium sp.]          76   3e-12
gb|AAA74913.1| acetolactate synthase precursor [Xanthium sp.]          75   4e-12
sp|P27819.1|ILVB3_BRANA RecName: Full=Acetolactate synthase 3, c...    75   7e-12
ref|NP_190425.1| acetolactate synthase [Arabidopsis thaliana] gi...    74   2e-11
sp|P27818.1|ILVB1_BRANA RecName: Full=Acetolactate synthase 1, c...    74   2e-11

>gb|AAB60297.1| acetolactate synthase precursor [Xanthium sp.]
          Length = 648

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = +2

Query: 62  PKITTSPPSLFPKSRRPFSRFTLPIKPSSHFRRPSTLRITNVLS--KPTPVKSP--PQKF 229
           P ITT PPS  P+     +RFT PI  +SH R    L I+NVLS  KPT   SP   + F
Sbjct: 9   PSITTKPPSSPPRPTF-LARFTFPITSTSHKRH--RLHISNVLSDSKPTITHSPLPTESF 65

Query: 230 ISRFSSDEPRKGSDVLVEALERQGV 304
           ISR++ D+PRKG+DVLVEALER+GV
Sbjct: 66  ISRYAPDQPRKGADVLVEALEREGV 90


>gb|AAA74913.1| acetolactate synthase precursor [Xanthium sp.]
          Length = 648

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = +2

Query: 62  PKITTSPPSLFPKSRRPFSRFTLPIKPSSHFRRPSTLRITNVLS--KPTPVKSP--PQKF 229
           P ITT PPS  P+     +RFT PI  +SH R    L I+NVLS  KPT   SP   + F
Sbjct: 9   PSITTKPPSSPPRPTF-LARFTFPITSTSHKRH--RLHISNVLSDSKPTITHSPLPTKSF 65

Query: 230 ISRFSSDEPRKGSDVLVEALERQGV 304
           ISR++ D+PRKG+DVLVEALER+GV
Sbjct: 66  ISRYAPDQPRKGADVLVEALEREGV 90


>sp|P27819.1|ILVB3_BRANA RecName: Full=Acetolactate synthase 3, chloroplastic; AltName:
           Full=ALS III; AltName: Full=Acetohydroxy-acid synthase
           III; AltName: Full=Acetolactate synthase III; Flags:
           Precursor gi|17776|emb|CAA77615.1| acetohydroxyacid
           synthase III [Brassica napus]
           gi|379030365|dbj|BAL68082.1| acetolactate synthase
           [Brassica rapa subsp. pekinensis]
          Length = 652

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 11/99 (11%)
 Frame = +2

Query: 44  AATALKPKITTSPPSLFPKSRRPFSRFTLPI-----KPSSHFRRPSTLRITNVLSKPTPV 208
           AAT+  P   T+ PS   KS  P SRF+LP      KPSS   RP  L I+ VL+  +PV
Sbjct: 3   AATSSSPISLTAKPS--SKSPLPISRFSLPFSLTPQKPSSRLHRP--LAISAVLN--SPV 56

Query: 209 KSPPQK------FISRFSSDEPRKGSDVLVEALERQGVE 307
              P+K      FISR++ DEPRKG+D+LVEALERQGVE
Sbjct: 57  NVAPEKTDKIKTFISRYAPDEPRKGADILVEALERQGVE 95


>ref|NP_190425.1| acetolactate synthase [Arabidopsis thaliana]
           gi|124372|sp|P17597.1|ILVB_ARATH RecName:
           Full=Acetolactate synthase, chloroplastic; Short=AtALS;
           AltName: Full=Acetohydroxy-acid synthase; AltName:
           Full=Protein CHLORSULFURON RESISTANT 1; Flags: Precursor
           gi|6523087|emb|CAB62345.1| acetolactate synthase
           [Arabidopsis thaliana] gi|58331777|gb|AAW70386.1|
           At3g48560 [Arabidopsis thaliana]
           gi|332644909|gb|AEE78430.1| acetolactate synthase
           [Arabidopsis thaliana] gi|226221|prf||1501386B
           acetolactate synthase
          Length = 670

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 18/109 (16%)
 Frame = +2

Query: 35  STMAATALKPKITTSPPSLFPKSRRPFSRFTLPI-----KPSSHFRR-------PSTLRI 178
           +T   T+     +T P     KS  P SRF+LP      K SS  RR       PS++  
Sbjct: 5   TTTTTTSSSISFSTKPSPSSSKSPLPISRFSLPFSLNPNKSSSSSRRRGIKSSSPSSISA 64

Query: 179 -----TNVLSKPTPVK-SPPQKFISRFSSDEPRKGSDVLVEALERQGVE 307
                TNV + P+P K + P+ FISRF+ D+PRKG+D+LVEALERQGVE
Sbjct: 65  VLNTTTNVTTTPSPTKPTKPETFISRFAPDQPRKGADILVEALERQGVE 113


>sp|P27818.1|ILVB1_BRANA RecName: Full=Acetolactate synthase 1, chloroplastic; AltName:
           Full=ALS I; AltName: Full=Acetohydroxy-acid synthase I;
           AltName: Full=Acetolactate synthase I; Flags: Precursor
           gi|17772|emb|CAA77613.1| actohydroxyacid synthase I
           [Brassica napus] gi|270567208|gb|ACZ92141.1|
           acetohydroxyacid synthase [Brassica napus]
          Length = 655

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 12/100 (12%)
 Frame = +2

Query: 44  AATALKPKITTSPPSLFPKSRRPFSRFTLPI-----KPSSHFRRPSTLRITNVLSKPTPV 208
           AAT+  P   T+ PS   KS  P SRF+LP      K SS   RP  L I+ VL+ P  V
Sbjct: 3   AATSSSPISLTAKPS--SKSPLPISRFSLPFSLTPQKDSSRLHRP--LAISAVLNSPVNV 58

Query: 209 KSP-PQK------FISRFSSDEPRKGSDVLVEALERQGVE 307
             P P+K      F+SR++ DEPRKG+D+LVEALERQGVE
Sbjct: 59  APPSPEKTDKNKTFVSRYAPDEPRKGADILVEALERQGVE 98


Top