BLASTX nr result

ID: Cnidium21_contig00021770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021770
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...   153   8e-35
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   153   8e-35
ref|XP_003616997.1| Transmembrane protein [Medicago truncatula] ...   151   3e-34
ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-34

>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  155 bits (393), Expect = 1e-35
 Identities = 78/116 (67%), Positives = 90/116 (77%)
 Frame = -1

Query: 615 KIFAERMKMAKHPKFIMPVVFVSFKTRWDAVVCAQTQQSRNPIVWLTEWAPEPRDVYWDN 436
           +I  ER K+  +PK IMP  FVSFKTRW A VCAQTQQSRNP +WLT WAPEPRDVYWDN
Sbjct: 300 EISLERDKIVNNPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTIWLTGWAPEPRDVYWDN 359

Query: 435 LAIPFASLTI*RVVVSIAXXXXXXXXFMIPIARVHSLENHEGIEKAVPFLKPVIEV 268
           LAIPF SLT+ R+V+++A        FMIPIA V SL N EGIEKA+PFLKP+IE+
Sbjct: 360 LAIPFVSLTLRRLVIAVA-FFFLTFFFMIPIAFVQSLANIEGIEKALPFLKPIIEM 414


>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score =  153 bits (386), Expect = 8e-35
 Identities = 75/115 (65%), Positives = 89/115 (77%)
 Frame = -1

Query: 615 KIFAERMKMAKHPKFIMPVVFVSFKTRWDAVVCAQTQQSRNPIVWLTEWAPEPRDVYWDN 436
           +I  ER ++A  PK IMP  FVSFKTRW A VCAQTQQSRNP +WLTEWAPEPRDVYW N
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 435 LAIPFASLTI*RVVVSIAXXXXXXXXFMIPIARVHSLENHEGIEKAVPFLKPVIE 271
           LAIPF SLT+ R+++++A        +MIPIA V SL + EGIEKAVPFL+P+IE
Sbjct: 362 LAIPFVSLTVRRLIIAVA-FFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score =  153 bits (386), Expect = 8e-35
 Identities = 75/115 (65%), Positives = 89/115 (77%)
 Frame = -1

Query: 615 KIFAERMKMAKHPKFIMPVVFVSFKTRWDAVVCAQTQQSRNPIVWLTEWAPEPRDVYWDN 436
           +I  ER ++A  PK IMP  FVSFKTRW A VCAQTQQSRNP +WLTEWAPEPRDVYW N
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 435 LAIPFASLTI*RVVVSIAXXXXXXXXFMIPIARVHSLENHEGIEKAVPFLKPVIE 271
           LAIPF SLT+ R+++++A        +MIPIA V SL + EGIEKAVPFL+P+IE
Sbjct: 362 LAIPFVSLTVRRLIIAVA-FFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_003616997.1| Transmembrane protein [Medicago truncatula]
           gi|355518332|gb|AES99955.1| Transmembrane protein
           [Medicago truncatula]
          Length = 766

 Score =  151 bits (381), Expect = 3e-34
 Identities = 73/112 (65%), Positives = 87/112 (77%)
 Frame = -1

Query: 603 ERMKMAKHPKFIMPVVFVSFKTRWDAVVCAQTQQSRNPIVWLTEWAPEPRDVYWDNLAIP 424
           E+ K+ K+PK IMP  FVSFKTRW A VCAQTQQ+RNP +WLTEWAPEPRD+YWDN+AIP
Sbjct: 304 EKDKVTKNPKSIMPAAFVSFKTRWGAAVCAQTQQTRNPTIWLTEWAPEPRDIYWDNMAIP 363

Query: 423 FASLTI*RVVVSIAXXXXXXXXFMIPIARVHSLENHEGIEKAVPFLKPVIEV 268
           + SL+I R+V+ +A        FMIPIA V SL N EGIEKA PFLK +IE+
Sbjct: 364 YVSLSIRRLVIGVA-FFFLTFFFMIPIAFVQSLANIEGIEKAAPFLKSIIEI 414


>ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|222860209|gb|EEE97756.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  150 bits (380), Expect = 4e-34
 Identities = 76/124 (61%), Positives = 92/124 (74%)
 Frame = -1

Query: 615 KIFAERMKMAKHPKFIMPVVFVSFKTRWDAVVCAQTQQSRNPIVWLTEWAPEPRDVYWDN 436
           +I  ER K+ K PK IMP  FVSFKTRW A VCAQTQQSRNP +WLTEWAPEPRDVYW+N
Sbjct: 304 EIEEEREKVLKDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWEN 363

Query: 435 LAIPFASLTI*RVVVSIAXXXXXXXXFMIPIARVHSLENHEGIEKAVPFLKPVIEV*VSF 256
           LAIP+ SL++ R+++ +A        FMIPIA V +L + EGIEK  PFLKP+IE  + F
Sbjct: 364 LAIPYMSLSVRRLIIGVA-FFFLTFFFMIPIASVQALASIEGIEKKAPFLKPIIE--IKF 420

Query: 255 LKPV 244
           +K V
Sbjct: 421 IKSV 424


Top