BLASTX nr result

ID: Cnidium21_contig00021756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021756
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321351.1| response regulator [Populus trichocarpa] gi|...    67   2e-09
ref|XP_002321349.1| pseudo response regulator [Populus trichocar...    67   2e-09
ref|XP_002318502.1| pseudo response regulator [Populus trichocar...    67   2e-09
gb|AAO27295.1| timing of CAB expression 1-like protein [Brassica...    66   3e-09
gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]            65   4e-09

>ref|XP_002321351.1| response regulator [Populus trichocarpa]
           gi|222868347|gb|EEF05478.1| response regulator [Populus
           trichocarpa]
          Length = 477

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 327 KERCFDKKVRYQSRSKLAVQRPRVKGQFVRQVQTEATEVETDE 199
           KERC++KKVRY+SR KLA QRPRVKGQFVRQV  + +  ETD+
Sbjct: 435 KERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPAETDQ 477


>ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
           gi|222868345|gb|EEF05476.1| pseudo response regulator
           [Populus trichocarpa]
          Length = 687

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 327 KERCFDKKVRYQSRSKLAVQRPRVKGQFVRQVQTEATEVETDE 199
           KERC++KKVRY+SR KLA QRPRVKGQFVRQV  + +  ETD+
Sbjct: 645 KERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPAETDQ 687


>ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
           gi|222859175|gb|EEE96722.1| pseudo response regulator
           [Populus trichocarpa]
          Length = 529

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 327 KERCFDKKVRYQSRSKLAVQRPRVKGQFVRQVQTEATEVETDE 199
           KERC++KKVRY+SR KLA QRPRVKGQFVRQV  + +  ETD+
Sbjct: 487 KERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPAETDQ 529


>gb|AAO27295.1| timing of CAB expression 1-like protein [Brassica rapa subsp.
           pekinensis]
          Length = 104

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 327 KERCFDKKVRYQSRSKLAVQRPRVKGQFVRQVQTEATEVETDE 199
           K+RCFDKKVRY+SR KLA QRPR+KGQFVRQVQ  +TE  T E
Sbjct: 61  KDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQ--STETSTQE 101


>gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
          Length = 628

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 327 KERCFDKKVRYQSRSKLAVQRPRVKGQFVRQVQTEATEVETDE 199
           KERCF+KKVRY+SR KLA QRPR+KGQFVRQVQ  +TE  T E
Sbjct: 585 KERCFEKKVRYESRKKLAEQRPRIKGQFVRQVQ--STETSTQE 625


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