BLASTX nr result
ID: Cnidium21_contig00021721
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021721
(495 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin... 106 6e-32
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin... 95 5e-29
ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin... 95 5e-29
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2... 97 8e-29
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin... 99 8e-29
>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
vinifera] gi|147768909|emb|CAN75883.1| hypothetical
protein VITISV_024456 [Vitis vinifera]
Length = 296
Score = 106 bits (265), Expect(2) = 6e-32
Identities = 50/74 (67%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Frame = -3
Query: 493 TSGCQFGEGCHFLHYVPGGYSALGQMTNHGG-----PTARNPGLPSFADAPSPTLKTKPC 329
TSGC FGEGCHFLHYVPGGYSA+ QMTN GG P ARNP P PT+KT+ C
Sbjct: 48 TSGCPFGEGCHFLHYVPGGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPTVKTRIC 107
Query: 328 TKYNTPEGCKFGDK 287
K+NTPEGCKFGDK
Sbjct: 108 NKFNTPEGCKFGDK 121
Score = 55.8 bits (133), Expect(2) = 6e-32
Identities = 38/76 (50%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = -1
Query: 216 FAHKENELGRP---GFEDRRSFGSMP-QYGRRXXXXXXXXXXXXXXXXXXXAKISIDASL 49
FAH E ELGRP ED R+ G M + R AKIS+DASL
Sbjct: 124 FAHGELELGRPIVPTHEDPRAMGPMGGRLAGRLEAPPPGLAAAASFGASATAKISVDASL 183
Query: 48 AGPIIGKGGVNSKQIC 1
AG IIGKGGVNSKQIC
Sbjct: 184 AGAIIGKGGVNSKQIC 199
>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Glycine max]
Length = 297
Score = 94.7 bits (234), Expect(2) = 5e-29
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Frame = -3
Query: 493 TSGCQFGEGCHFLHYVPGGYSALGQMTNHGG-----PTARNPGLPSFADAPS-PTLKTKP 332
TSGC FGEGCHFLHYVPGG+ A+ Q+ N G RNP PSF D S P +KT+
Sbjct: 45 TSGCPFGEGCHFLHYVPGGFKAVSQLINVGSNPVIPQVGRNPVPPSFPDGSSPPVVKTRL 104
Query: 331 CTKYNTPEGCKFGDK 287
C K+NT EGCKFGDK
Sbjct: 105 CNKFNTAEGCKFGDK 119
Score = 58.2 bits (139), Expect(2) = 5e-29
Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = -1
Query: 216 FAHKENELGRP---GFEDRRSFGSMP--QYGRRXXXXXXXXXXXXXXXXXXXAKISIDAS 52
FAH E ELGRP +ED R G MP + G R AKISI+AS
Sbjct: 122 FAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISINAS 181
Query: 51 LAGPIIGKGGVNSKQIC 1
LAG +IGK GVNSKQIC
Sbjct: 182 LAGAVIGKNGVNSKQIC 198
>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
gi|255636715|gb|ACU18693.1| unknown [Glycine max]
Length = 297
Score = 94.7 bits (234), Expect(2) = 5e-29
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Frame = -3
Query: 493 TSGCQFGEGCHFLHYVPGGYSALGQMTNHGG-----PTARNPGLPSFADAPS-PTLKTKP 332
TSGC FGEGCHFLHYVPGG+ A+ Q+ N G RNP PSF D S P +KT+
Sbjct: 45 TSGCPFGEGCHFLHYVPGGFKAVSQLINVGSNPVTPQVGRNPVPPSFPDGSSPPVVKTRL 104
Query: 331 CTKYNTPEGCKFGDK 287
C K+NT EGCKFGDK
Sbjct: 105 CNKFNTAEGCKFGDK 119
Score = 58.2 bits (139), Expect(2) = 5e-29
Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = -1
Query: 216 FAHKENELGRP---GFEDRRSFGSMP--QYGRRXXXXXXXXXXXXXXXXXXXAKISIDAS 52
FAH E ELGRP +ED R G MP + G R AKISI+AS
Sbjct: 122 FAHGEWELGRPTAPSYEDPRVLGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISINAS 181
Query: 51 LAGPIIGKGGVNSKQIC 1
LAG +IGK GVNSKQIC
Sbjct: 182 LAGAVIGKNGVNSKQIC 198
>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
predicted protein [Populus trichocarpa]
Length = 304
Score = 97.1 bits (240), Expect(2) = 8e-29
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 8/77 (10%)
Frame = -3
Query: 493 TSGCQFGEGCHFLHYVPGGYSALGQMTNHGG-----PTARNPGLP--SFADAPS-PTLKT 338
TSGC FGEGCHFLHYVPGG+ A+ QM N GG P +RN G+P S+ D S P++K+
Sbjct: 50 TSGCPFGEGCHFLHYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKS 109
Query: 337 KPCTKYNTPEGCKFGDK 287
+ C KYNT EGCKFGDK
Sbjct: 110 RLCNKYNTVEGCKFGDK 126
Score = 55.1 bits (131), Expect(2) = 8e-29
Identities = 35/77 (45%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = -1
Query: 216 FAHKENELGR----PGFEDRRSFGSMP-QYGRRXXXXXXXXXXXXXXXXXXXAKISIDAS 52
FAH E ELG+ P +ED R+ G +P + R KISIDAS
Sbjct: 129 FAHGEWELGKASAAPSYEDPRAMGPIPGRMSRHMEHPHQGHGAAASFGSSATTKISIDAS 188
Query: 51 LAGPIIGKGGVNSKQIC 1
LAG IIGK GVNSK IC
Sbjct: 189 LAGAIIGKNGVNSKHIC 205
>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Vitis vinifera]
Length = 301
Score = 99.4 bits (246), Expect(2) = 8e-29
Identities = 49/76 (64%), Positives = 54/76 (71%), Gaps = 7/76 (9%)
Frame = -3
Query: 493 TSGCQFGEGCHFLHYVPGGYSALGQMTNHGG-----PTARNPGL-PSFADAPS-PTLKTK 335
TSGC FGEGCHFLHYVPGG A+ QM N GG P ARNP + PSF D S P +KT+
Sbjct: 49 TSGCPFGEGCHFLHYVPGGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTR 108
Query: 334 PCTKYNTPEGCKFGDK 287
C KYN+ EGCKFGDK
Sbjct: 109 LCNKYNSAEGCKFGDK 124
Score = 52.8 bits (125), Expect(2) = 8e-29
Identities = 37/76 (48%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = -1
Query: 216 FAHKENELGRPGF----EDRRSFGSMPQYGRRXXXXXXXXXXXXXXXXXXXAKISIDASL 49
FAH E ELG+P ED R GS GR AKIS+DASL
Sbjct: 127 FAHGEWELGKPTLPSHHEDHRGMGSGRLAGR-LEPPPPGLAAAASFGASATAKISVDASL 185
Query: 48 AGPIIGKGGVNSKQIC 1
AG IIGK GVNSKQIC
Sbjct: 186 AGAIIGKSGVNSKQIC 201