BLASTX nr result
ID: Cnidium21_contig00021715
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021715
(1151 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2... 306 5e-81
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 295 1e-77
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2... 290 6e-76
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 283 7e-74
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 276 9e-72
>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
predicted protein [Populus trichocarpa]
Length = 311
Score = 306 bits (785), Expect = 5e-81
Identities = 153/311 (49%), Positives = 200/311 (64%), Gaps = 20/311 (6%)
Frame = +3
Query: 21 LRAMSTGGTTHWCYYCRQPVTLREQNGLCNNCCGGFVQQLEDLPSVNV---------DHH 173
++ MS+ THWCY CR+PV LR ++ C C GGFVQ+L+D+ +N D H
Sbjct: 1 MKRMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDH 60
Query: 174 NQRPGFMEAVSNFLRQQVAQRQRIDTSEARGRSESGPESGNFWGPWPIYSGDMPVRLPNN 353
+ G MEA S F+RQ++A R + R RS+S PE +GP I+ G +P RL N
Sbjct: 61 DNMFGLMEAFSAFMRQRMADRSH--NHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGN 118
Query: 354 GGLLDLFNELLG--FRRETGGDYFVGPGVEEFFEQFHVEDRRGPLPASKSAIDALPTVKI 527
GGL LF+ G F R GDYFVGPG+EE FEQ DRRGP PA++S+IDA+PT+KI
Sbjct: 119 GGLEALFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAMPTIKI 178
Query: 528 SKKDVRSDSHCAVCKEKFQIGSQAKKLPCKHIYHSDCIVPWLAQRSSCPVCRQDVVPQKS 707
++K +RSDSHC VCK+KF++GS+A+++PC H+YHSDCIVPWL Q +SCPVCRQ++ PQ S
Sbjct: 179 TQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGS 238
Query: 708 GSG---------NKNSNRREASGTNRQRQGPWSFLWPFRSSRSSSYHTGTAGSSSSTNHS 860
SG +++SN + R+ P S+LWPFRSS SSS H T GSSS T H
Sbjct: 239 NSGHSYQSSSSRSRSSNYSGRENSREGRRNPLSYLWPFRSSNSSSNHDETPGSSSPTMHE 298
Query: 861 VNHYREHFEWP 893
NH + WP
Sbjct: 299 NNHQMGYSGWP 309
>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 295 bits (756), Expect = 1e-77
Identities = 146/311 (46%), Positives = 207/311 (66%), Gaps = 21/311 (6%)
Frame = +3
Query: 30 MSTGGTTHWCYYCRQPVTLREQNGLCNNCCGGFVQQLEDLPSVNV---------DHHNQR 182
MST T HWCY C QPV LR ++ C +C GGFVQ+L+++ + ++ N+R
Sbjct: 1 MSTANT-HWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRR 59
Query: 183 PGFMEAVSNFLRQQVAQRQRIDTSEARGRSESGPESGNFWGPWPIYSGDMPVRLPNNGGL 362
G +E SNF+RQ++ +D ++ RGR +S P+ G +GPW I+ G +PVRL +GG
Sbjct: 60 LGLLELFSNFMRQRL-----VDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGF 114
Query: 363 LDLFNEL--LGFRRETGGDYFVGPGVEEFFEQFHVEDRRGPLPASKSAIDALPTVKISKK 536
FN + +G R GGDYF+GPG+EE FEQ DRRGP PAS+S+IDA+P VKI+++
Sbjct: 115 EAFFNGVPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQR 174
Query: 537 DVRSDSHCAVCKEKFQIGSQAKKLPCKHIYHSDCIVPWLAQRSSCPVCRQDVVPQKSG-- 710
+RS+SHC VC++KF++GS+A+++PC H+YHSDCIVPWL Q +SCPVCRQ++ Q SG
Sbjct: 175 HIRSNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSS 234
Query: 711 ---SGNKNSNR----REASGTNRQRQGPWSFLWPFRSSRSSSYHTGTAGSSSSTNHSVN- 866
SG+ NS+R RE T + R+ P++ LWPFR+S S+S H+ T GS+S H N
Sbjct: 235 HSSSGSNNSSRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQ 294
Query: 867 HYREHFEWPVE 899
H ++ WP +
Sbjct: 295 HETGYYGWPFD 305
>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
predicted protein [Populus trichocarpa]
Length = 308
Score = 290 bits (741), Expect = 6e-76
Identities = 145/308 (47%), Positives = 195/308 (63%), Gaps = 20/308 (6%)
Frame = +3
Query: 30 MSTGGTTHWCYYCRQPVTLREQNGLCNNCCGGFVQQLEDLPSVNV---------DHHNQR 182
MS+ THWCY CR+PV LR ++ C C GGFVQ+L+D+ ++ D +QR
Sbjct: 1 MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSDDDRDQR 60
Query: 183 PGFMEAVSNFLRQQVAQRQRIDTSEARGRSESGPESGNFWGPWPIYSGDMPVRLPNNGGL 362
G MEA S+F+RQ++A R + R RS+S P +GP I+ G +P RL NGG
Sbjct: 61 FGLMEAFSDFMRQRMADRSH--NHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGF 118
Query: 363 LDLFNELLG--FRRETGGDYFVGPGVEEFFEQFHVEDRRGPLPASKSAIDALPTVKISKK 536
LF+ G F R GDYF+GPG+EE FEQ D+RGP PA++S+IDA+PT+KI++K
Sbjct: 119 EALFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPTIKITQK 178
Query: 537 DVRSDSHCAVCKEKFQIGSQAKKLPCKHIYHSDCIVPWLAQRSSCPVCRQDVVP------ 698
+RSDSHC VCK+KF++GS+A+++PC H+YHSDCIVPWL Q +SCPVCRQ++ P
Sbjct: 179 HLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSR 238
Query: 699 ---QKSGSGNKNSNRREASGTNRQRQGPWSFLWPFRSSRSSSYHTGTAGSSSSTNHSVNH 869
Q S S +++SN + R+ P S+LWPFRSS SSS H T SSS H N
Sbjct: 239 HSYQSSSSRSRSSNYSGRENSRGGRRNPLSYLWPFRSSNSSSNHDETPESSSPAMHENNP 298
Query: 870 YREHFEWP 893
+ + WP
Sbjct: 299 HMGYSGWP 306
>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 309
Score = 283 bits (723), Expect = 7e-74
Identities = 143/312 (45%), Positives = 199/312 (63%), Gaps = 22/312 (7%)
Frame = +3
Query: 30 MSTGGTTHWCYYCRQPVTLREQNGLCNNCCGGFVQQLEDLPSVNV---------DHHNQR 182
MS THWCY CR+PV L ++ +C +C GFV +L D+ VN + +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60
Query: 183 PGFMEAVSNFLRQQVAQRQRIDTSEARGRSESGPESGNFWGPWPIYSGDMPVRLPNNGGL 362
G ME S F+R Q+A R R + + R +++S PE + P I+ G +P RL +GG
Sbjct: 61 LGLMETFSAFMRHQMADRGR--SHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGF 118
Query: 363 LDLFNEL--LGFRRETGGDYFVGPGVEEFFEQFHVEDRRGPLPASKSAIDALPTVKISKK 536
LFN +G R GDYF+GPG+EE FEQ +R+GP PAS+S+IDA+PT+KI+++
Sbjct: 119 EALFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANNRQGPPPASRSSIDAMPTIKITQR 178
Query: 537 DVRSDSHCAVCKEKFQIGSQAKKLPCKHIYHSDCIVPWLAQRSSCPVCRQDVVPQKSGSG 716
+RSDSHC VCK+KF++GS+A+++PC H+YHSDCIVPWL Q +SCPVCRQ+++PQ S
Sbjct: 179 HLRSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELLPQGLSSS 238
Query: 717 NKNSNRREASGT-------NRQRQGPWSFLWPFRSSRSSSYHTGTAGSSSST----NHSV 863
N+++N R S + + R+ P+SFLWPFRSS SSS T GSSS T +S
Sbjct: 239 NRSTNGRSRSASLSSSGRESHGRRNPFSFLWPFRSSHSSSNDEAT-GSSSPTPTIPENSH 297
Query: 864 NHYREHFEWPVE 899
+H+ + WP E
Sbjct: 298 HHHAGYSGWPFE 309
>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max] gi|356577674|ref|XP_003556949.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Glycine max]
Length = 309
Score = 276 bits (705), Expect = 9e-72
Identities = 143/312 (45%), Positives = 195/312 (62%), Gaps = 22/312 (7%)
Frame = +3
Query: 30 MSTGGTTHWCYYCRQPVTLREQNGLCNNCCGGFVQQLEDLPSVNV---------DHHNQR 182
MS THWCY CR+PV L ++ +C +C GFV +L D+ VN + +QR
Sbjct: 1 MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60
Query: 183 PGFMEAVSNFLRQQVAQRQRIDTSEARGRSESGPESGNFWGPWPIYSGDMPVRLPNNGGL 362
G ME S F+R Q+A R R + + R R++S PE + P I+ G +P RL +GG
Sbjct: 61 LGLMETFSAFMRHQMADRGR--SHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGF 118
Query: 363 LDLFNEL--LGFRRETGGDYFVGPGVEEFFEQFHVEDRRGPLPASKSAIDALPTVKISKK 536
LFN +G + GDYF+GPG+EE FEQ +R+GPLPAS+S+IDA+PT+KI ++
Sbjct: 119 EALFNGAPGIGLTQGNTGDYFIGPGLEELFEQLSANNRQGPLPASRSSIDAMPTIKIVQR 178
Query: 537 DVRSDSHCAVCKEKFQIGSQAKKLPCKHIYHSDCIVPWLAQRSSCPVCRQDVVPQKSGSG 716
+RSDSHC VCK+KF++GS+A+++PC H+YHSDCIVPWL Q +SCPVCRQ++ PQ S
Sbjct: 179 HLRSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSS 238
Query: 717 NKNSNRREASG-------TNRQRQGPWSFLWPFRSSRSSSYHTGTAGSSSST----NHSV 863
N +N R S + R+ P+SFLWPFRSS SSS T GSS+ T +S
Sbjct: 239 NGGANGRSRSARVSSSGRESHGRRNPFSFLWPFRSSHSSSNDEAT-GSSTPTPTIPENSH 297
Query: 864 NHYREHFEWPVE 899
+H+ + WP E
Sbjct: 298 HHHAGYSGWPFE 309