BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021708
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   110   3e-22
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002872270.1| pentatricopeptide repeat-containing protein ...    91   3e-16
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...    90   5e-16

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  125 bits (315), Expect = 8e-27
 Identities = 56/102 (54%), Positives = 77/102 (75%)
 Frame = -3

Query: 811 NEDVGKAINAMKKGFAMLKHCNWRPSPSIVVTIAEYFERTGDIIGANRYIKVIRHYGLAS 632
           ++++ KAINAMKKGF+MLKHC+WRP+  +V  IA Y E  G++   N+Y+KVI   G+A 
Sbjct: 371 SQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAK 430

Query: 631 IPVYKSLLRLHTCNQRPIDDIIVMMRKDNIELDDEVSTLIQS 506
           +P+YKSLLR+H   QRP+ DI+ MM KD IE+DDE S L+Q+
Sbjct: 431 LPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQA 472


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  110 bits (276), Expect = 3e-22
 Identities = 52/102 (50%), Positives = 74/102 (72%)
 Frame = -3

Query: 811 NEDVGKAINAMKKGFAMLKHCNWRPSPSIVVTIAEYFERTGDIIGANRYIKVIRHYGLAS 632
           ++ + KAI+AM +  +ML+HC+WRPS  I+++IAE+ ER  +   AN +I+VI H G+AS
Sbjct: 390 SQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLGVAS 449

Query: 631 IPVYKSLLRLHTCNQRPIDDIIVMMRKDNIELDDEVSTLIQS 506
           +P+YK LLR+H   QR   DI+ MM KD IELDDE S L+Q+
Sbjct: 450 LPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQA 491


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  107 bits (268), Expect = 2e-21
 Identities = 53/102 (51%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
 Frame = -3

Query: 811 NEDVGKAINAMKKGFAMLK--HCNWRPSPSIVVTIAEYFERTGDIIGANRYIKVIRHYGL 638
           ++ + KAI+AMKKGF++LK   C+WRPS SI++ IAE+FE+ G+   AN YIK +   G+
Sbjct: 406 SQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLGV 465

Query: 637 ASIPVYKSLLRLHTCNQRPIDDIIVMMRKDNIELDDEVSTLI 512
           A++P+YK  LR++   QRP  DI+ MM KD IELDDE S L+
Sbjct: 466 ATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507


>ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318107|gb|EFH48529.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 492

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 45/93 (48%), Positives = 62/93 (66%)
 Frame = -3

Query: 808 EDVGKAINAMKKGFAMLKHCNWRPSPSIVVTIAEYFERTGDIIGANRYIKVIRHYGLASI 629
           + + KAI AM + F ++K C+WRPS SIV+ IA+YFE    I  AN YI+ + H GLAS+
Sbjct: 400 QSMEKAIVAMHRAFELMKGCHWRPSESIVMAIAKYFEEEEKIEEANTYIRDLHHLGLASL 459

Query: 628 PVYKSLLRLHTCNQRPIDDIIVMMRKDNIELDD 530
           P+Y+ LLR+    QRP  DI  MM+ D I +D+
Sbjct: 460 PLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 530

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 41/101 (40%), Positives = 69/101 (68%)
 Frame = -3

Query: 808 EDVGKAINAMKKGFAMLKHCNWRPSPSIVVTIAEYFERTGDIIGANRYIKVIRHYGLASI 629
           + + +AI  MK+  AM+K C+WRP   +V+ IAEY E+ G++  AN+YI  +R++GL S+
Sbjct: 418 QKMDEAIITMKRALAMMKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSL 477

Query: 628 PVYKSLLRLHTCNQRPIDDIIVMMRKDNIELDDEVSTLIQS 506
            +YK LLR+H    +P   I+ MM +D IE+D+E  +++++
Sbjct: 478 SLYKILLRMHLSANKPPFHILKMMDEDKIEMDNETLSILKA 518