BLASTX nr result
ID: Cnidium21_contig00021695
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00021695 (1404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides] 72 3e-10 ref|XP_002327737.1| predicted protein [Populus trichocarpa] gi|1... 72 3e-10 gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536... 71 6e-10 ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arab... 70 1e-09 ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512... 70 1e-09 >gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides] Length = 158 Score = 72.0 bits (175), Expect = 3e-10 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 21/144 (14%) Frame = +2 Query: 134 RIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM-- 307 R I L S+DG+S +V EA L+ K IE+D N LP++T +++ V++YC Sbjct: 5 RKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVIEYCKKH 63 Query: 308 -------------------NNNTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430 N +TEFV+ VD TL DLI AA++ I GL+D TCQT+ Sbjct: 64 VETPKSEDRGTNSGDDELKNWDTEFVR-VDQATLFDLILAANYLNIKGLLDLTCQTVADM 122 Query: 431 IRTRDVTAIKNSFFTGLEHNKESE 502 I+ + I+ +F + E E Sbjct: 123 IKGKTPEEIRKTFNIKNDFTPEEE 146 >ref|XP_002327737.1| predicted protein [Populus trichocarpa] gi|118481562|gb|ABK92723.1| unknown [Populus trichocarpa] gi|222836822|gb|EEE75215.1| predicted protein [Populus trichocarpa] Length = 158 Score = 72.0 bits (175), Expect = 3e-10 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 21/144 (14%) Frame = +2 Query: 134 RIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM-- 307 R I L S+DG+S +V EA L+ K IE+D N LP++T +++ V++YC Sbjct: 5 RKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVIEYCKKH 63 Query: 308 -------------------NNNTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430 N +TEFV+ VD TL DLI AA++ I GL+D TCQT+ Sbjct: 64 VETPKPEDRGTNSGDDELKNWDTEFVR-VDQATLFDLILAANYLNIKGLLDLTCQTVADM 122 Query: 431 IRTRDVTAIKNSFFTGLEHNKESE 502 I+ + I+ +F + E E Sbjct: 123 IKGKTPEEIRKTFNIKNDFTPEEE 146 >gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like protein [Gossypium hirsutum] Length = 156 Score = 71.2 bits (173), Expect = 6e-10 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 18/147 (12%) Frame = +2 Query: 116 SSNGTERIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVM 295 SS+G R I L S+DG+S +V EA L+ K IE+D N LP++T +++ V+ Sbjct: 2 SSSG--RKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVI 58 Query: 296 KYCMNN------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTL 421 +YC + + +FVK VD TL DLI AA++ I GL+D TCQT+ Sbjct: 59 EYCKKHVEAPKTDDRSADDELKSWDADFVK-VDQATLFDLILAANYLNIKGLLDLTCQTV 117 Query: 422 VSKIRTRDVTAIKNSFFTGLEHNKESE 502 I+ + I+ +F + E E Sbjct: 118 ADMIKGKTPEEIRKTFNIKNDFTPEEE 144 >ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp. lyrata] gi|297333463|gb|EFH63881.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp. lyrata] Length = 703 Score = 70.5 bits (171), Expect = 1e-09 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 23/201 (11%) Frame = +2 Query: 140 IKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCMNN-- 313 I L S+DG+S +V EA L+ +E+D N LP++T +++ V++YC + Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGV-PLPNVTSKILAKVIEYCKKHVE 64 Query: 314 ---------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430 +TEF+K +D TL +LI AA++ I L+D TCQT+ Sbjct: 65 VAAAKSEAVDGATSDEDLKAWDTEFMK-IDQATLFELILAANYLNIKNLLDLTCQTVADM 123 Query: 431 IRTRDVTAIKNSFFTGLEHNKESEGKHIKWVLSYRKRMIRVRGKQTLMKPLNFVESDRSP 610 I+ + I+ +F + E E +H ++ R+ + ++ G +KP S +P Sbjct: 124 IKGKTPEEIRTTFNIKNDFTPEEEEEH--HIVVTRQELKKMEG----LKPSAANSSPLTP 177 Query: 611 FVRGSLGFIKRRDKVFYDSVS 673 LGF++R V+ D S Sbjct: 178 -----LGFLERAATVYGDFTS 193 >ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1, putative [Ricinus communis] Length = 157 Score = 70.5 bits (171), Expect = 1e-09 Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 20/145 (13%) Frame = +2 Query: 128 TERIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM 307 T R I L S+DG++ +V EA L+ K IE+D N LP++T ++S V++YC Sbjct: 3 TSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILSKVIEYCK 61 Query: 308 NN--------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVS 427 + + EFVK VD TL DLI AA++ I L+D TCQT+ Sbjct: 62 KHVETSKSDDRPSSVDDELKTWDAEFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVAD 120 Query: 428 KIRTRDVTAIKNSFFTGLEHNKESE 502 I+ + I+ +F + E E Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEE 145