BLASTX nr result

ID: Cnidium21_contig00021695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021695
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides]       72   3e-10
ref|XP_002327737.1| predicted protein [Populus trichocarpa] gi|1...    72   3e-10
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...    71   6e-10
ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arab...    70   1e-09
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...    70   1e-09

>gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 21/144 (14%)
 Frame = +2

Query: 134 RIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM-- 307
           R I L S+DG+S +V EA  L+    K  IE+D   N    LP++T  +++ V++YC   
Sbjct: 5   RKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVIEYCKKH 63

Query: 308 -------------------NNNTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430
                              N +TEFV+ VD  TL DLI AA++  I GL+D TCQT+   
Sbjct: 64  VETPKSEDRGTNSGDDELKNWDTEFVR-VDQATLFDLILAANYLNIKGLLDLTCQTVADM 122

Query: 431 IRTRDVTAIKNSFFTGLEHNKESE 502
           I+ +    I+ +F    +   E E
Sbjct: 123 IKGKTPEEIRKTFNIKNDFTPEEE 146


>ref|XP_002327737.1| predicted protein [Populus trichocarpa] gi|118481562|gb|ABK92723.1|
           unknown [Populus trichocarpa]
           gi|222836822|gb|EEE75215.1| predicted protein [Populus
           trichocarpa]
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 21/144 (14%)
 Frame = +2

Query: 134 RIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM-- 307
           R I L S+DG+S +V EA  L+    K  IE+D   N    LP++T  +++ V++YC   
Sbjct: 5   RKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVIEYCKKH 63

Query: 308 -------------------NNNTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430
                              N +TEFV+ VD  TL DLI AA++  I GL+D TCQT+   
Sbjct: 64  VETPKPEDRGTNSGDDELKNWDTEFVR-VDQATLFDLILAANYLNIKGLLDLTCQTVADM 122

Query: 431 IRTRDVTAIKNSFFTGLEHNKESE 502
           I+ +    I+ +F    +   E E
Sbjct: 123 IKGKTPEEIRKTFNIKNDFTPEEE 146


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
 Frame = +2

Query: 116 SSNGTERIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVM 295
           SS+G  R I L S+DG+S +V EA  L+    K  IE+D   N    LP++T  +++ V+
Sbjct: 2   SSSG--RKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILAKVI 58

Query: 296 KYCMNN------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTL 421
           +YC  +                  + +FVK VD  TL DLI AA++  I GL+D TCQT+
Sbjct: 59  EYCKKHVEAPKTDDRSADDELKSWDADFVK-VDQATLFDLILAANYLNIKGLLDLTCQTV 117

Query: 422 VSKIRTRDVTAIKNSFFTGLEHNKESE 502
              I+ +    I+ +F    +   E E
Sbjct: 118 ADMIKGKTPEEIRKTFNIKNDFTPEEE 144


>ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
           lyrata] gi|297333463|gb|EFH63881.1| hypothetical protein
           ARALYDRAFT_339769 [Arabidopsis lyrata subsp. lyrata]
          Length = 703

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 23/201 (11%)
 Frame = +2

Query: 140 IKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCMNN-- 313
           I L S+DG+S +V EA  L+       +E+D   N    LP++T  +++ V++YC  +  
Sbjct: 6   IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGV-PLPNVTSKILAKVIEYCKKHVE 64

Query: 314 ---------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVSK 430
                                +TEF+K +D  TL +LI AA++  I  L+D TCQT+   
Sbjct: 65  VAAAKSEAVDGATSDEDLKAWDTEFMK-IDQATLFELILAANYLNIKNLLDLTCQTVADM 123

Query: 431 IRTRDVTAIKNSFFTGLEHNKESEGKHIKWVLSYRKRMIRVRGKQTLMKPLNFVESDRSP 610
           I+ +    I+ +F    +   E E +H   ++  R+ + ++ G    +KP     S  +P
Sbjct: 124 IKGKTPEEIRTTFNIKNDFTPEEEEEH--HIVVTRQELKKMEG----LKPSAANSSPLTP 177

Query: 611 FVRGSLGFIKRRDKVFYDSVS 673
                LGF++R   V+ D  S
Sbjct: 178 -----LGFLERAATVYGDFTS 193


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
 Frame = +2

Query: 128 TERIIKLMSADGDSLDVTEAETLQLHIAKDAIENDSKGNPTYTLPDITKNVMSLVMKYCM 307
           T R I L S+DG++ +V EA  L+    K  IE+D   N    LP++T  ++S V++YC 
Sbjct: 3   TSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGI-PLPNVTSKILSKVIEYCK 61

Query: 308 NN--------------------NTEFVKEVDPQTLLDLIEAAHHFQITGLMDSTCQTLVS 427
            +                    + EFVK VD  TL DLI AA++  I  L+D TCQT+  
Sbjct: 62  KHVETSKSDDRPSSVDDELKTWDAEFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 428 KIRTRDVTAIKNSFFTGLEHNKESE 502
            I+ +    I+ +F    +   E E
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEE 145


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