BLASTX nr result
ID: Cnidium21_contig00021633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021633
(1299 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA79032.1| EF-1-alpha-related GTP-binding protein [Nicotiana... 360 3e-97
ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|2... 359 8e-97
gb|AAA79033.1| SUP2, partial [Nicotiana tabacum] 358 1e-96
ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-... 358 1e-96
emb|CBI15530.3| unnamed protein product [Vitis vinifera] 355 1e-95
>gb|AAA79032.1| EF-1-alpha-related GTP-binding protein [Nicotiana tabacum]
Length = 515
Score = 360 bits (925), Expect = 3e-97
Identities = 184/329 (55%), Positives = 233/329 (70%), Gaps = 1/329 (0%)
Frame = +3
Query: 3 EFETGFEKGGQTRELVHLAXXXXXXXXXXXXNKMDDPTVNWSIRRYKEIESQVTPFLKSS 182
EFETG+E+GGQTRE V LA NKMDDPTVNWS RY EIES++ PFL+SS
Sbjct: 199 EFETGYERGGQTREHVQLAKTLGVTKFLVVVNKMDDPTVNWSKERYDEIESKMVPFLRSS 258
Query: 183 GCCGKQDIQFLPVSGLQDANLLTRMSKNVCSWWNGACLMEALDSLDLPPRDPKAPFRMPI 362
G K+D+QFLP+SGL +NL TRM K+VC WWNG CL E LD++++PPRDP P RMPI
Sbjct: 259 GYNVKKDVQFLPISGLLGSNLKTRMEKSVCPWWNGPCLFETLDAVEVPPRDPNGPLRMPI 318
Query: 363 IDKFYNFGTFVMGKAVSGSLSVGDTLMIIPNKAPVEALAIYPDKDIVESVIYPNKDKVAC 542
IDKF + GT VMGK SGS+ GD L+IIPNKA V+ LAI+ D +DKV
Sbjct: 319 IDKFKDMGTVVMGKIESGSIHEGDNLLIIPNKAAVKVLAIFCD-----------EDKVRH 367
Query: 543 AESGENIWVRF-GKADMEIKSGYVLCSLDRPIPVVDSFIAQLQFLDVLDNEIYAAGFQAV 719
GEN+ VR G + +I SG+VLCS+ +PI V F+AQLQ L++LDN I+ AG++AV
Sbjct: 368 VGPGENVRVRLSGVEEDDILSGFVLCSVAKPIHAVTEFVAQLQILELLDNAIFTAGYKAV 427
Query: 720 LHVHSVVEECEIVEMIKQFDSRTXXXXXXXXXXXXNEAVVLCRIQVKNPICIEKFSDFPQ 899
LH+HSVVEECEIVE+++Q D +T N A+VLCR+QV N IC+EKFSDF Q
Sbjct: 428 LHIHSVVEECEIVELMQQIDLKTKKPMKKKPLFVKNGAIVLCRVQVNNLICVEKFSDFAQ 487
Query: 900 LGRFALRSSEGKTVAIGEVTELPSLSGSS 986
LGRF LR +EGKTVA+G++T LP+++ ++
Sbjct: 488 LGRFTLR-TEGKTVAVGKITALPTVADNA 515
>ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|222870975|gb|EEF08106.1|
predicted protein [Populus trichocarpa]
Length = 524
Score = 359 bits (922), Expect = 8e-97
Identities = 186/324 (57%), Positives = 230/324 (70%), Gaps = 1/324 (0%)
Frame = +3
Query: 3 EFETGFEKGGQTRELVHLAXXXXXXXXXXXXNKMDDPTVNWSIRRYKEIESQVTPFLKSS 182
EFETG+E+GGQTRE V LA NKMD+PTVNWS RY EIES++ PFLKSS
Sbjct: 209 EFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVNWSKERYDEIESKMIPFLKSS 268
Query: 183 GCCGKQDIQFLPVSGLQDANLLTRMSKNVCSWWNGACLMEALDSLDLPPRDPKAPFRMPI 362
G K+D+QFLP+SGL N+ TR+ K VC WWNG CL EALDS+++PPRDP P RMPI
Sbjct: 269 GYNVKKDVQFLPISGLMGTNMKTRLDKAVCPWWNGPCLFEALDSIEVPPRDPNGPLRMPI 328
Query: 363 IDKFYNFGTFVMGKAVSGSLSVGDTLMIIPNKAPVEALAIYPDKDIVESVIYPNKDKVAC 542
IDKF + GT VMGK SGS++ GDTL+++PNK V+ LA++ D ++KV
Sbjct: 329 IDKFKDMGTVVMGKVESGSVTEGDTLLVMPNKTQVKVLAVFCD-----------ENKVRR 377
Query: 543 AESGENIWVRF-GKADMEIKSGYVLCSLDRPIPVVDSFIAQLQFLDVLDNEIYAAGFQAV 719
A GEN+ V+ G D +I SG+VL S+ RPI V F AQLQ L++LDN I+ AG++AV
Sbjct: 378 AGPGENVRVKLSGIDDEDILSGFVLSSVARPIFAVTEFDAQLQILELLDNAIFTAGYKAV 437
Query: 720 LHVHSVVEECEIVEMIKQFDSRTXXXXXXXXXXXXNEAVVLCRIQVKNPICIEKFSDFPQ 899
LHVHSVVEECEIV++++Q D +T N A+VLCRIQV N IC+EKFSDFPQ
Sbjct: 438 LHVHSVVEECEIVQLLQQIDPKTRKPMKKKVLFVKNGAIVLCRIQVNNLICVEKFSDFPQ 497
Query: 900 LGRFALRSSEGKTVAIGEVTELPS 971
LGRF LR +EGKTVA+G+VTELPS
Sbjct: 498 LGRFTLR-TEGKTVAVGKVTELPS 520
>gb|AAA79033.1| SUP2, partial [Nicotiana tabacum]
Length = 409
Score = 358 bits (920), Expect = 1e-96
Identities = 182/326 (55%), Positives = 231/326 (70%), Gaps = 1/326 (0%)
Frame = +3
Query: 3 EFETGFEKGGQTRELVHLAXXXXXXXXXXXXNKMDDPTVNWSIRRYKEIESQVTPFLKSS 182
EFETG+E+GGQTRE V LA NKMDDPTVNWS RY EIES++ PFL+SS
Sbjct: 93 EFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKMVPFLRSS 152
Query: 183 GCCGKQDIQFLPVSGLQDANLLTRMSKNVCSWWNGACLMEALDSLDLPPRDPKAPFRMPI 362
G K+D+QFLP+SGL +NL TRM K+VC WWNG CL E LD++++PPRDP P RMPI
Sbjct: 153 GYNVKKDVQFLPISGLLGSNLKTRMEKSVCPWWNGPCLFETLDAVEVPPRDPNGPLRMPI 212
Query: 363 IDKFYNFGTFVMGKAVSGSLSVGDTLMIIPNKAPVEALAIYPDKDIVESVIYPNKDKVAC 542
IDKF + GT VMGK SGS+ GD L+++PNKA V+ LAI+ D +DKV
Sbjct: 213 IDKFKDMGTVVMGKIESGSIREGDNLLVMPNKAAVKVLAIFCD-----------EDKVRH 261
Query: 543 AESGENIWVRF-GKADMEIKSGYVLCSLDRPIPVVDSFIAQLQFLDVLDNEIYAAGFQAV 719
GEN+ VR G + +I SG+VLCS+ +PI V F+AQLQ L++LDN I+ AG++AV
Sbjct: 262 VGPGENVRVRLSGVEEDDILSGFVLCSVAKPIHAVTEFVAQLQILELLDNAIFTAGYKAV 321
Query: 720 LHVHSVVEECEIVEMIKQFDSRTXXXXXXXXXXXXNEAVVLCRIQVKNPICIEKFSDFPQ 899
LH+HSVVEECEIVE+++Q D +T N A+VLCR+QV N IC+EKFSDF Q
Sbjct: 322 LHIHSVVEECEIVELMQQIDLKTKKPMKKKPLFVKNGAIVLCRVQVNNLICVEKFSDFAQ 381
Query: 900 LGRFALRSSEGKTVAIGEVTELPSLS 977
LGRF LR +EGKTVA+G++T LP+++
Sbjct: 382 LGRFTLR-TEGKTVAVGKITALPTVA 406
>ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-binding subunit, putative
[Ricinus communis] gi|223527760|gb|EEF29863.1| eukaryotic
peptide chain release factor GTP-binding subunit,
putative [Ricinus communis]
Length = 497
Score = 358 bits (920), Expect = 1e-96
Identities = 186/329 (56%), Positives = 236/329 (71%), Gaps = 1/329 (0%)
Frame = +3
Query: 3 EFETGFEKGGQTRELVHLAXXXXXXXXXXXXNKMDDPTVNWSIRRYKEIESQVTPFLKSS 182
EFETG+E+GGQTRE V LA NKMDDPTV+WS RY EIES++ PFL+SS
Sbjct: 181 EFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVSWSKERYDEIESKMIPFLRSS 240
Query: 183 GCCGKQDIQFLPVSGLQDANLLTRMSKNVCSWWNGACLMEALDSLDLPPRDPKAPFRMPI 362
G K+D+QFLP+SGL N+ TR+ KN CSWWNG CL EALD++++P RDPK PFRMPI
Sbjct: 241 GYNVKKDVQFLPLSGLVGTNMKTRVDKNTCSWWNGPCLFEALDAIEVPLRDPKGPFRMPI 300
Query: 363 IDKFYNFGTFVMGKAVSGSLSVGDTLMIIPNKAPVEALAIYPDKDIVESVIYPNKDKVAC 542
IDKF + GT VMGK SGS++ GD+L+++PNK V+ +A+Y D ++KV
Sbjct: 301 IDKFKDMGTVVMGKVESGSVTEGDSLLVMPNKTHVKVVAVYCD-----------ENKVRR 349
Query: 543 AESGENIWVRF-GKADMEIKSGYVLCSLDRPIPVVDSFIAQLQFLDVLDNEIYAAGFQAV 719
A GEN+ VR G D +I +G+VL S+ +PI V F+AQLQ L++LDN I+ AG++AV
Sbjct: 350 AGPGENLRVRLSGIDDEDILAGFVLSSVAKPIVAVTEFVAQLQILELLDNAIFTAGYKAV 409
Query: 720 LHVHSVVEECEIVEMIKQFDSRTXXXXXXXXXXXXNEAVVLCRIQVKNPICIEKFSDFPQ 899
LH+HSVVEECEIVE+++Q D +T N AVV+CR+Q N ICIEKFSDFPQ
Sbjct: 410 LHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQANNMICIEKFSDFPQ 469
Query: 900 LGRFALRSSEGKTVAIGEVTELPSLSGSS 986
LGRF LR +EGKTVA+G+VTELP+ SGSS
Sbjct: 470 LGRFTLR-TEGKTVAVGKVTELPT-SGSS 496
>emb|CBI15530.3| unnamed protein product [Vitis vinifera]
Length = 8416
Score = 355 bits (911), Expect = 1e-95
Identities = 183/326 (56%), Positives = 231/326 (70%), Gaps = 1/326 (0%)
Frame = +3
Query: 3 EFETGFEKGGQTRELVHLAXXXXXXXXXXXXNKMDDPTVNWSIRRYKEIESQVTPFLKSS 182
EFETG+E+GGQTRE V LA NKMDDPTVNWS RY EIES++ PFL+SS
Sbjct: 8101 EFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKERYDEIESKMIPFLRSS 8160
Query: 183 GCCGKQDIQFLPVSGLQDANLLTRMSKNVCSWWNGACLMEALDSLDLPPRDPKAPFRMPI 362
G K+D+ FLP+SGL N+ TR+ K++CSWWNG CL EALD++D+P RDPK PFRMPI
Sbjct: 8161 GYNVKKDVHFLPLSGLVGLNMKTRVDKSLCSWWNGPCLFEALDAIDVPFRDPKGPFRMPI 8220
Query: 363 IDKFYNFGTFVMGKAVSGSLSVGDTLMIIPNKAPVEALAIYPDKDIVESVIYPNKDKVAC 542
IDKF + GT VMGK SGS+ GD+L+++PNK V+ A+Y D ++KV
Sbjct: 8221 IDKFKDMGTVVMGKVESGSVREGDSLLVMPNKVQVKVFAVYCD-----------ENKVKL 8269
Query: 543 AESGENIWVRF-GKADMEIKSGYVLCSLDRPIPVVDSFIAQLQFLDVLDNEIYAAGFQAV 719
A GEN+ VR G + +I SG+VL S+ +PIP V F+AQLQ L++LDN I+ AG++AV
Sbjct: 8270 AGPGENVRVRLSGIEEEDIISGFVLSSIAKPIPAVYEFVAQLQILELLDNAIFTAGYKAV 8329
Query: 720 LHVHSVVEECEIVEMIKQFDSRTXXXXXXXXXXXXNEAVVLCRIQVKNPICIEKFSDFPQ 899
LH+HS+VEECEI+E+++Q D +T N AVVLCRIQV N ICIEKFSDFPQ
Sbjct: 8330 LHIHSIVEECEIIELLQQIDPKTKKPMKKKVLFVKNGAVVLCRIQVNNLICIEKFSDFPQ 8389
Query: 900 LGRFALRSSEGKTVAIGEVTELPSLS 977
LGRF LR +EGKTVA+G+V +L S S
Sbjct: 8390 LGRFTLR-TEGKTVAMGKVMDLNSAS 8414