BLASTX nr result

ID: Cnidium21_contig00021632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021632
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   177   6e-43
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]            172   3e-41

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  177 bits (450), Expect = 6e-43
 Identities = 76/96 (79%), Positives = 90/96 (93%)
 Frame = -3

Query: 289  DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110
            DHASARYI+T+L+PITR+LFPKDDDILLDYL+EDGQ IEPTWYVP +PMVLVNG+EGIGT
Sbjct: 782  DHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGT 841

Query: 109  GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2
            GWS+ +P YNPRDI+AN+RR LN E+M+PMDPWY+G
Sbjct: 842  GWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRG 877


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  177 bits (450), Expect = 6e-43
 Identities = 76/96 (79%), Positives = 90/96 (93%)
 Frame = -3

Query: 289  DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110
            DHASARYI+T+L+PITR+LFPKDDDILLDYL+EDGQ IEPTWYVP +PMVLVNG+EGIGT
Sbjct: 782  DHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGT 841

Query: 109  GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2
            GWS+ +P YNPRDI+AN+RR LN E+M+PMDPWY+G
Sbjct: 842  GWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRG 877


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  175 bits (444), Expect = 3e-42
 Identities = 76/96 (79%), Positives = 88/96 (91%)
 Frame = -3

Query: 289  DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110
            DHASARYI+TQL+PITR+LFPKDDD LLDYL EDGQ IEP WY+P++PMVLVNG EGIGT
Sbjct: 779  DHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNWYMPIIPMVLVNGCEGIGT 838

Query: 109  GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2
            GWST++P YNPRDIVANIRR LN E+M+PM+PWY+G
Sbjct: 839  GWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRG 874


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
            predicted protein [Populus trichocarpa]
          Length = 1482

 Score =  174 bits (442), Expect = 5e-42
 Identities = 75/96 (78%), Positives = 88/96 (91%)
 Frame = -3

Query: 289  DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110
            DHASARYI+TQL+PITR+LFPKDDD LLDYL EDGQ IEPTWY+P++P VLVNG EGIGT
Sbjct: 782  DHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPTWYMPIIPTVLVNGCEGIGT 841

Query: 109  GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2
            GWST++P YNPRD+VANIRR LN E+M+PM+PWY+G
Sbjct: 842  GWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRG 877


>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score =  172 bits (436), Expect = 3e-41
 Identities = 75/96 (78%), Positives = 86/96 (89%)
 Frame = -3

Query: 289  DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110
            DHASARY+FTQL+P+TR+LFPK DDILLDYL+EDGQ IEPTWYVP++PMVLVNG+EGIGT
Sbjct: 791  DHASARYVFTQLSPVTRFLFPKADDILLDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGT 850

Query: 109  GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2
            GWS+YVP YNP DI+ANIR  LN E  +PM PWYKG
Sbjct: 851  GWSSYVPNYNPVDIIANIRHLLNDEATEPMHPWYKG 886


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