BLASTX nr result
ID: Cnidium21_contig00021632
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00021632 (291 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24922.3| unnamed protein product [Vitis vinifera] 177 6e-43 ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 177 6e-43 ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 175 3e-42 ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 174 5e-42 dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis] 172 3e-41 >emb|CBI24922.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 177 bits (450), Expect = 6e-43 Identities = 76/96 (79%), Positives = 90/96 (93%) Frame = -3 Query: 289 DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110 DHASARYI+T+L+PITR+LFPKDDDILLDYL+EDGQ IEPTWYVP +PMVLVNG+EGIGT Sbjct: 782 DHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGT 841 Query: 109 GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2 GWS+ +P YNPRDI+AN+RR LN E+M+PMDPWY+G Sbjct: 842 GWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRG 877 >ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera] Length = 1489 Score = 177 bits (450), Expect = 6e-43 Identities = 76/96 (79%), Positives = 90/96 (93%) Frame = -3 Query: 289 DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110 DHASARYI+T+L+PITR+LFPKDDDILLDYL+EDGQ IEPTWYVP +PMVLVNG+EGIGT Sbjct: 782 DHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGT 841 Query: 109 GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2 GWS+ +P YNPRDI+AN+RR LN E+M+PMDPWY+G Sbjct: 842 GWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRG 877 >ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1| predicted protein [Populus trichocarpa] Length = 1468 Score = 175 bits (444), Expect = 3e-42 Identities = 76/96 (79%), Positives = 88/96 (91%) Frame = -3 Query: 289 DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110 DHASARYI+TQL+PITR+LFPKDDD LLDYL EDGQ IEP WY+P++PMVLVNG EGIGT Sbjct: 779 DHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNWYMPIIPMVLVNGCEGIGT 838 Query: 109 GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2 GWST++P YNPRDIVANIRR LN E+M+PM+PWY+G Sbjct: 839 GWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRG 874 >ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1| predicted protein [Populus trichocarpa] Length = 1482 Score = 174 bits (442), Expect = 5e-42 Identities = 75/96 (78%), Positives = 88/96 (91%) Frame = -3 Query: 289 DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110 DHASARYI+TQL+PITR+LFPKDDD LLDYL EDGQ IEPTWY+P++P VLVNG EGIGT Sbjct: 782 DHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPTWYMPIIPTVLVNGCEGIGT 841 Query: 109 GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2 GWST++P YNPRD+VANIRR LN E+M+PM+PWY+G Sbjct: 842 GWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRG 877 >dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis] Length = 1469 Score = 172 bits (436), Expect = 3e-41 Identities = 75/96 (78%), Positives = 86/96 (89%) Frame = -3 Query: 289 DHASARYIFTQLAPITRYLFPKDDDILLDYLSEDGQKIEPTWYVPVVPMVLVNGAEGIGT 110 DHASARY+FTQL+P+TR+LFPK DDILLDYL+EDGQ IEPTWYVP++PMVLVNG+EGIGT Sbjct: 791 DHASARYVFTQLSPVTRFLFPKADDILLDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGT 850 Query: 109 GWSTYVPKYNPRDIVANIRRWLNKELMQPMDPWYKG 2 GWS+YVP YNP DI+ANIR LN E +PM PWYKG Sbjct: 851 GWSSYVPNYNPVDIIANIRHLLNDEATEPMHPWYKG 886