BLASTX nr result

ID: Cnidium21_contig00021628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021628
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460473.1| hypothetical protein SORBIDRAFT_02g028950 [S...    70   2e-10
ref|XP_003577675.1| PREDICTED: uncharacterized protein LOC100827...    69   8e-10
gb|AAL91595.1|AC099400_1 Putative polyprotein [Oryza sativa Japo...    65   9e-09
gb|EEE67268.1| hypothetical protein OsJ_24447 [Oryza sativa Japo...    65   1e-08
gb|EEC82139.1| hypothetical protein OsI_26190 [Oryza sativa Indi...    65   1e-08

>ref|XP_002460473.1| hypothetical protein SORBIDRAFT_02g028950 [Sorghum bicolor]
           gi|241923850|gb|EER96994.1| hypothetical protein
           SORBIDRAFT_02g028950 [Sorghum bicolor]
          Length = 270

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
 Frame = -2

Query: 418 ICHCRATKCAVEFLSHVALELD---LNIPNC---YGSFPLHDAAITLSCDLVKLLVDHGA 257
           +C+  A +CA   L   A EL+    N PNC   YG FPLH+AA   SCD++KLL+ HGA
Sbjct: 2   VCY-NALRCAKVVLEGKAPELNGMHAN-PNCINPYGYFPLHEAAERFSCDMIKLLLRHGA 59

Query: 256 IRESVFWDPVTSEDISPLDYAVERLSCDKYL-INWSPKKS----VFKLIITLCLPQMQEA 92
                       E++ PL  A+E     KYL  N SP +S    ++KLI  LCLP+M+  
Sbjct: 60  SANVHTVGNDVIENLLPLHVAIENTCMHKYLEDNLSPSQSHLDYIYKLIHLLCLPEMKIF 119

Query: 91  RETITFLAGVETTSSIV 41
            +T   LA  E T++++
Sbjct: 120 LDTTRLLA--EKTNNLL 134


>ref|XP_003577675.1| PREDICTED: uncharacterized protein LOC100827929 [Brachypodium
           distachyon]
          Length = 538

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
 Frame = -2

Query: 535 DKSDELKSILESSQMKISGQDVLLNFSGSDISAY-----SILGKICHCRATKCAVEFLSH 371
           D  DEL+ IL    ++   + +  N +G  +S+        L  I    A +CA   L  
Sbjct: 86  DTYDELEPILLKDSVRCFLR-LFENSAGKGMSSNLTVTSQTLTFIVSLNAMRCAKVVLEG 144

Query: 370 VALEL-----DLNIPNCYGSFPLHDAAITLSCDLVKLLVDHGAIRESVFWDPVTSEDISP 206
           VA EL     + N  N YG FP+H+AA   + D++KLL+ HGA            E++ P
Sbjct: 145 VAPELRGMHANPNCINRYGYFPIHEAAERFAVDMIKLLLRHGASANVRTVGGNVIENLLP 204

Query: 205 LDYAVERLSCDKYL-----INWSPKKSVFKLIITLCLPQMQEARETITFLAGVETTSSIV 41
           L  AVE     KYL     ++ +P   ++KLI  LCLP+M+   +T   LA  E T++++
Sbjct: 205 LHVAVENTCLHKYLEDNLSLSQNPLDYIYKLIHLLCLPEMKIFLDTTRLLA--EKTNNLL 262

Query: 40  SAAIFKAVKRGQV 2
              ++K ++ G++
Sbjct: 263 Q-ELWKYIEDGKI 274


>gb|AAL91595.1|AC099400_1 Putative polyprotein [Oryza sativa Japonica Group]
           gi|110288515|gb|ABG65884.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 893

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
 Frame = -2

Query: 403 ATKCAVEFLSHVALELDLNI--PNC---YGSFPLHDAAITLSCDLVKLLVDHGAIRESVF 239
           A +CA   L   A EL      PNC   YG F LH+AA   S D+ KLL  HGA      
Sbjct: 135 ALRCAKVVLEGKAAELRCKHANPNCMNPYGYFALHEAAERFSADMTKLLFRHGASANVRT 194

Query: 238 WDPVTSEDISPLDYAVERLSCDKYL-INWSP------KKSVFKLIITLCLPQMQEARETI 80
                 + + PLD AVE     KYL  N SP      +  ++KLI  LCLP+M+   +TI
Sbjct: 195 ASDAGIQGLLPLDVAVENACMHKYLEDNLSPTPMQYHEDYIYKLIHLLCLPEMKVFLDTI 254

Query: 79  TFLAGVETTSSIVSAAIFKAVKRGQV 2
             LA  E T ++V   ++  +K G++
Sbjct: 255 RLLA--EKTDNLVD-ELWNYMKNGKL 277


>gb|EEE67268.1| hypothetical protein OsJ_24447 [Oryza sativa Japonica Group]
          Length = 1184

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
 Frame = -2

Query: 343 PNC---YGSFPLHDAAITLSCDLVKLLVDHGAIRESVFWDPVTSEDISPLDYAVERLSCD 173
           PNC   YG FPLH+AA   S +++KLL+  GA            ED+ PL  A+E     
Sbjct: 162 PNCVTKYGYFPLHEAAERFSVEMIKLLLRFGASANVRTVGDDVIEDLLPLHIAIENTCLH 221

Query: 172 KYL-INWSPKKS----VFKLIITLCLPQMQEARETITFLAG 65
           KYL  N SP ++    ++KLI  LCLP+M+   +TI  LAG
Sbjct: 222 KYLEDNLSPSQNHLDYIYKLIHLLCLPEMKIFLDTIRLLAG 262


>gb|EEC82139.1| hypothetical protein OsI_26190 [Oryza sativa Indica Group]
          Length = 523

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
 Frame = -2

Query: 343 PNC---YGSFPLHDAAITLSCDLVKLLVDHGAIRESVFWDPVTSEDISPLDYAVERLSCD 173
           PNC   YG FPLH+AA   S +++KLL+  GA            ED+ PL  A+E     
Sbjct: 162 PNCVTKYGYFPLHEAAERFSVEMIKLLLRFGASANVRTVGDDVIEDLLPLHIAIENTCLH 221

Query: 172 KYL-INWSPKKS----VFKLIITLCLPQMQEARETITFLAG 65
           KYL  N SP ++    ++KLI  LCLP+M+   +TI  LAG
Sbjct: 222 KYLEDNLSPSQNHLDYIYKLIHLLCLPEMKIFLDTIRLLAG 262


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