BLASTX nr result
ID: Cnidium21_contig00021561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021561
(1267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g... 181 8e-65
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm... 174 6e-61
ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif... 174 2e-59
ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycin... 160 6e-59
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera] 172 6e-59
>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
gi|222858111|gb|EEE95658.1| f-box family protein
[Populus trichocarpa]
Length = 273
Score = 181 bits (460), Expect(2) = 8e-65
Identities = 96/160 (60%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Frame = -3
Query: 884 KKVLAHKRAVLRIESRIAEHSRRISELRSSLGKEVERLKAAASELSNLRNVRQASVALNV 705
+KV AH+RAVLR ES + E R+I E+ + L +E E+++A A+ELSNL VRQASVALNV
Sbjct: 87 RKVAAHRRAVLRKESEVLEFERKIREIENGLRQETEKMRATAAELSNLHKVRQASVALNV 146
Query: 704 WQPEVVRGRQKQIVEQCTVNVKSRTSALDMEVKLCKQQIAAFDKARTDEKSRLQAAKEHL 525
WQPEV+RGRQKQIVEQ V V+SR +L+ME+KLC+Q+I+ FDKA DEK RL+ A E L
Sbjct: 147 WQPEVIRGRQKQIVEQSAVPVESRVHSLEMELKLCRQRISGFDKAYRDEKRRLELATEQL 206
Query: 524 ASVMYHPLRDYNLPSSSSFSKGDECHSKK-KKQKTSNLCK 408
AS+ YHPLRD+ L +S GD+ H KK KK KTS +CK
Sbjct: 207 ASMKYHPLRDHKLINS-----GDKEHKKKRKKLKTSVICK 241
Score = 93.6 bits (231), Expect(2) = 8e-65
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 7/96 (7%)
Frame = -1
Query: 1231 MAVLPDELWRRILEIGAIENSPNLLNYKDLCSLSITCRTLKRLSGEDFIWSSFLSSDFSQ 1052
M +PDELWR+ILE+G I+NS LNYKDLC +SI+CR L RLS E+ +W LSSDF
Sbjct: 1 MGGVPDELWRQILEMG-IQNSK--LNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPS 57
Query: 1051 TRIQ-------SSSSAKSQYKLCFERDKEKKVLAHK 965
Q +S+SAKS YK+ FER+K +KV AH+
Sbjct: 58 PNQQNPNPNNSTSASAKSTYKIKFEREKSRKVAAHR 93
>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
gi|223529466|gb|EEF31423.1| conserved hypothetical
protein [Ricinus communis]
Length = 261
Score = 174 bits (440), Expect(2) = 6e-61
Identities = 92/155 (59%), Positives = 114/155 (73%)
Frame = -3
Query: 884 KKVLAHKRAVLRIESRIAEHSRRISELRSSLGKEVERLKAAASELSNLRNVRQASVALNV 705
KKV AH+RAVLR ES I E R+I ++ L +E ++++ A+ELSNL VRQASVALNV
Sbjct: 91 KKVAAHRRAVLRKESEIMERERKIRDIEYRLCQESDKMRDTANELSNLHKVRQASVALNV 150
Query: 704 WQPEVVRGRQKQIVEQCTVNVKSRTSALDMEVKLCKQQIAAFDKARTDEKSRLQAAKEHL 525
WQPEVVRGRQKQ+VEQC V+ +SR +L+ME+KLCKQQI F+KA DEK RL+ AKE L
Sbjct: 151 WQPEVVRGRQKQLVEQCVVSFESRVHSLEMELKLCKQQIVGFNKAHRDEKRRLEKAKEEL 210
Query: 524 ASVMYHPLRDYNLPSSSSFSKGDECHSKKKKQKTS 420
AS+ YHPL+DY S S G ++KKKK K S
Sbjct: 211 ASMKYHPLQDYR-----STSCGQNEYNKKKKFKRS 240
Score = 88.2 bits (217), Expect(2) = 6e-61
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 11/100 (11%)
Frame = -1
Query: 1231 MAVLPDELWRRILEIGAIENSPNLLNYKDLCSLSITCRTLKRLSGEDFIWSSFLSSDFSQ 1052
M+ LPDELWR+I+E G ++ +YKDLC +SI CR L RLS E WS FLSSDF
Sbjct: 1 MSGLPDELWRQIIEFGIRSSN---FSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPP 57
Query: 1051 TRIQS-----------SSSAKSQYKLCFERDKEKKVLAHK 965
+ Q +S+AKS YK+ FE+++EKKV AH+
Sbjct: 58 SPQQQQHQQNPNPNNYTSTAKSTYKIRFEKEREKKVAAHR 97
>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
gi|296085868|emb|CBI31192.3| unnamed protein product
[Vitis vinifera]
Length = 256
Score = 174 bits (440), Expect(2) = 2e-59
Identities = 90/153 (58%), Positives = 113/153 (73%)
Frame = -3
Query: 884 KKVLAHKRAVLRIESRIAEHSRRISELRSSLGKEVERLKAAASELSNLRNVRQASVALNV 705
+K AH+RAVLR+ES+IA H R + E++ L +E E++KAA +EL NLR VRQASVALNV
Sbjct: 88 RKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTEETEKMKAAVTELPNLRKVRQASVALNV 147
Query: 704 WQPEVVRGRQKQIVEQCTVNVKSRTSALDMEVKLCKQQIAAFDKARTDEKSRLQAAKEHL 525
WQPEV+RG QKQ+V QC V V +R +AL+ME+KLC+QQIA D A +EK RL AAKE L
Sbjct: 148 WQPEVIRGWQKQMVGQCVVPVDARINALEMELKLCRQQIAGSDNAYRNEKRRLDAAKERL 207
Query: 524 ASVMYHPLRDYNLPSSSSFSKGDECHSKKKKQK 426
+ YHPLRDY SS DEC+S++KK K
Sbjct: 208 VVMKYHPLRDYKSTSSGV----DECNSQRKKLK 236
Score = 83.6 bits (205), Expect(2) = 2e-59
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Frame = -1
Query: 1231 MAVLPDELWRRILEIGAIENSPNLLNYKDLCSLSITCRTLKRLSGEDFIWSSFLSSDFSQ 1052
MA LPDE+WR+ILEIG ++ L YKDLC +SI+CR L RLS + +WS LSSDF
Sbjct: 1 MADLPDEMWRQILEIGIRSSN---LTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPH 57
Query: 1051 TRI--------QSSSSAKSQYKLCFERDKEKKVLAHK 965
T SS S K Y++ F+R++ +K AH+
Sbjct: 58 TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHR 94
>ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycine max]
Length = 267
Score = 160 bits (406), Expect(2) = 6e-59
Identities = 83/156 (53%), Positives = 111/156 (71%)
Frame = -3
Query: 884 KKVLAHKRAVLRIESRIAEHSRRISELRSSLGKEVERLKAAASELSNLRNVRQASVALNV 705
+++ AH+RAVLR ES++AEHSRR+ ++++ L +E + A +LSNLR +RQA VALNV
Sbjct: 87 RRIAAHRRAVLRKESQVAEHSRRLKDMKTRLAQETTKATQTAQDLSNLRRLRQAFVALNV 146
Query: 704 WQPEVVRGRQKQIVEQCTVNVKSRTSALDMEVKLCKQQIAAFDKARTDEKSRLQAAKEHL 525
WQPEVVRGRQKQ+VEQ V + R AL+ME KLCKQQI +K+ DEK RL AKE L
Sbjct: 147 WQPEVVRGRQKQMVEQSVVPAECRIHALEMEFKLCKQQILGLEKSYKDEKRRLDTAKEEL 206
Query: 524 ASVMYHPLRDYNLPSSSSFSKGDECHSKKKKQKTSN 417
AS+ YHP++++ P+S G+ H K+KK K N
Sbjct: 207 ASMKYHPVQEHK-PTSG----GENEHVKRKKLKICN 237
Score = 94.7 bits (234), Expect(2) = 6e-59
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Frame = -1
Query: 1225 VLPDELWRRILEIGAIENSPNLLNYKDLCSLSITCRTLKRLSGEDFIWSSFLSSDFSQTR 1046
+LPDELWRRILEIG N +YKDLC +SI+CR L RLS E+ +W+ L SD+ Q++
Sbjct: 5 LLPDELWRRILEIGIESNG---FSYKDLCCVSISCRRLHRLSSEEPLWNRLLFSDYPQSQ 61
Query: 1045 -----IQSSSSAKSQYKLCFERDKEKKVLAHK 965
SSSS+KS Y+L FERDKE+++ AH+
Sbjct: 62 SHPSSSSSSSSSKSLYRLRFERDKERRIAAHR 93
>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
Length = 256
Score = 172 bits (435), Expect(2) = 6e-59
Identities = 89/153 (58%), Positives = 112/153 (73%)
Frame = -3
Query: 884 KKVLAHKRAVLRIESRIAEHSRRISELRSSLGKEVERLKAAASELSNLRNVRQASVALNV 705
+K AH+RAVLR+ES+IA H R + E++ L +E E++KAA +EL NLR VRQASVALNV
Sbjct: 88 RKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTEETEKMKAAVTELPNLRKVRQASVALNV 147
Query: 704 WQPEVVRGRQKQIVEQCTVNVKSRTSALDMEVKLCKQQIAAFDKARTDEKSRLQAAKEHL 525
WQPEV+RG QKQ+V QC V V +R +AL+ME+ LC+QQIA D A +EK RL AAKE L
Sbjct: 148 WQPEVIRGWQKQMVGQCVVPVDARINALEMELXLCRQQIAGXDNAYRNEKRRLDAAKERL 207
Query: 524 ASVMYHPLRDYNLPSSSSFSKGDECHSKKKKQK 426
+ YHPLRDY SS DEC+S++KK K
Sbjct: 208 VIMKYHPLRDYKSTSSGV----DECNSQRKKLK 236
Score = 83.6 bits (205), Expect(2) = 6e-59
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Frame = -1
Query: 1231 MAVLPDELWRRILEIGAIENSPNLLNYKDLCSLSITCRTLKRLSGEDFIWSSFLSSDFSQ 1052
MA LPDE+WR+ILEIG ++ L YKDLC +SI+CR L RLS + +WS LSSDF
Sbjct: 1 MADLPDEMWRQILEIGIRSSN---LTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPH 57
Query: 1051 TRI--------QSSSSAKSQYKLCFERDKEKKVLAHK 965
T SS S K Y++ F+R++ +K AH+
Sbjct: 58 TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHR 94