BLASTX nr result

ID: Cnidium21_contig00021543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021543
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-contain...    74   1e-11
emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]    72   6e-11
ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycin...    70   1e-10
ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsi...    70   2e-10
ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyr...    69   5e-10

>ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Vitis vinifera] gi|297746130|emb|CBI16186.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
 Frame = +1

Query: 13  YYYEPSTGHKFRSLREVERYINGEVYTPRRRRSKTTLRLGHSGSHSKPQSQNSSYRKMVV 192
           YYYEP TG +FRSL+ +++Y+         +   T   LG      K + +   ++KM +
Sbjct: 35  YYYEPETGRQFRSLKSIQKYLT-------EKMENTPKILG----PDKEEEEEQPHQKMAM 83

Query: 193 SGGKMLKLAEEEDPNKYKMAIVPARNIPFSSPYRLPEGWVVEE-EPRGGYVDKYYYEPGT 369
                    +  DPN                   LP+ WV ++     G + KYYYEPGT
Sbjct: 84  ---------QIMDPN-----------------LELPDNWVFQKRSSSSGQIHKYYYEPGT 117

Query: 370 GRKFRSLSCVDRHLADRNENTMLSETLAELREYNMPLSKTFKIGSH 507
           GR+FRSL  V RHL + N+ T      ++  + N   +K     SH
Sbjct: 118 GRQFRSLKSVQRHLIEANDCTHKPSQNSDASKKNNSSTKVKTSTSH 163



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
 Frame = +1

Query: 280 SSPYRLPEGWVVEEEPRG-----GYVDKYYYEPGTGRKFRSLSCVDRHLADRNENT 432
           SS ++LP  WVV +  R      G +DKYYYEP TGR+FRSL  + ++L ++ ENT
Sbjct: 7   SSTFKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKMENT 62


>emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]
          Length = 212

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
 Frame = +1

Query: 13  YYYEPSTGHKFRSLREVERYINGEVYTPRRRRSKTTLRLGHSGSHSKPQSQNSSYRKMVV 192
           YYYEP TG +FRSL+ +++Y+         +   T   LG      K + +   ++KM +
Sbjct: 35  YYYEPETGRQFRSLKSIQKYLT-------EKMENTPKILG----PDKEEEEEQPHQKMAM 83

Query: 193 SGGKMLKLAEEEDPNKYKMAIVPARNIPFSSPYRLPEGWVVEE-EPRGGYVDKYYYEPGT 369
                    +  DPN                   LP+ WV ++     G + KYYYEPG 
Sbjct: 84  ---------QIMDPN-----------------LELPDNWVFQKRSSSSGQIHKYYYEPGX 117

Query: 370 GRKFRSLSCVDRHLADRNENTMLSETLAELREYNMPLSKTFKIGSH 507
           GR+FRSL  V RHL + N+ T      ++  + N   +K     SH
Sbjct: 118 GRQFRSLKSVQRHLIEANDCTHKPSQNSDASKKNNSSTKVKTSTSH 163



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
 Frame = +1

Query: 280 SSPYRLPEGWVVEEEPRG-----GYVDKYYYEPGTGRKFRSLSCVDRHLADRNENT 432
           SS ++LP  WVV +  R      G +DKYYYEP TGR+FRSL  + ++L ++ ENT
Sbjct: 7   SSTFKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKMENT 62


>ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycine max]
           gi|255634513|gb|ACU17620.1| unknown [Glycine max]
          Length = 261

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
 Frame = +1

Query: 289 YRLPEGWVVEEEPRGGY---VDKYYYEPGTGRKFRSLSCVDRHLADRNENTMLSETLAEL 459
           +RLP+GWVVE++PR  +    DKYYYEPGTGRKFRSL  V RHLA    + +++ T+   
Sbjct: 41  FRLPDGWVVEKKPRPSHESRFDKYYYEPGTGRKFRSLLSVQRHLAGETRDYVVANTMMPK 100

Query: 460 RE 465
            E
Sbjct: 101 NE 102


>ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsis thaliana]
           gi|75171028|sp|Q9FJF4.1|MBD7_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 7;
           Short=AtMBD7; Short=MBD07; AltName:
           Full=Methyl-CpG-binding protein MBD7
           gi|9757900|dbj|BAB08347.1| unnamed protein product
           [Arabidopsis thaliana] gi|50198785|gb|AAT70426.1|
           At5g59800 [Arabidopsis thaliana]
           gi|53828603|gb|AAU94411.1| At5g59800 [Arabidopsis
           thaliana] gi|332009852|gb|AED97235.1| methyl-CPG-binding
           domain 7 protein [Arabidopsis thaliana]
          Length = 306

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 39/195 (20%)
 Frame = +1

Query: 13  YYYEPSTGHKFRSLREVERYINGEVYTPRRRRS------KTTL----------------- 123
           Y+ EP TG +F SL  + R++ GEV   R  R+      KT +                 
Sbjct: 52  YFIEPGTGRQFSSLEAIHRHLAGEVNDRRLTRAGSFFQDKTRVYEGSRTKQDHCGVEYAS 111

Query: 124 ---RLGHSGSHSKPQSQNSSY-RKMVVSG--GKMLK--------LAEEEDPNKYKMAIVP 261
              RL    S  +   +NS Y  K  V    GK  +        L E  +  + ++ ++ 
Sbjct: 112 KGFRLPRGWSVEEVPRKNSHYIDKYYVERKTGKRFRSLVSVERYLRESRNSIEQQLRVLQ 171

Query: 262 ARNIPFSSPYRLPEGWVVEEEPR--GGYVDKYYYEPGTGRKFRSLSCVDRHLADRNENTM 435
            R    S  +RLP+GW+VEE+PR    ++D+ Y EPGTG KFRS++ V+R+L      T+
Sbjct: 172 NRR-GHSKDFRLPDGWIVEEKPRRSSSHIDRSYIEPGTGNKFRSMAAVERYLISVGNITL 230

Query: 436 LSETLAELREYNMPL 480
             ++++ +    +PL
Sbjct: 231 --DSVSMVHSERLPL 243


>ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyrata subsp. lyrata]
           gi|297312186|gb|EFH42610.1| methyl-CpG-binding domain 7
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
 Frame = +1

Query: 13  YYYEPSTGHKFRSLREVERYINGEVYTPRRRRSKTTLRLGHSGSHSKPQSQNSSYRKMVV 192
           Y+ EP TG +F SL  + R++  EV   R  R+ +  +                 R  V 
Sbjct: 52  YFIEPGTGRQFSSLEAIHRHLAREVNDRRLTRAASFFQ----------------ERTRVY 95

Query: 193 SGGKMLKLAEEEDPNKYKMAIVPARNIPFSSPYRLPEGWVVEEEPRGG--YVDKYYYEPG 366
            G   L+  +++D  + + A         S  +RLP GW VEE PR    Y+DKYY E  
Sbjct: 96  EG---LRTKQKQDHRRVEYA---------SKGFRLPRGWSVEEVPRKNSHYIDKYYVERK 143

Query: 367 TGRKFRSLSCVDRHLADRNENT-----MLSETLAELREYNMP 477
           TG++FRSL  V+R+L +    T     +L       +++++P
Sbjct: 144 TGKRFRSLVSVERYLRESGNRTDQQLILLQNRRGHSKDFSLP 185


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