BLASTX nr result

ID: Cnidium21_contig00021509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021509
         (1654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-41
ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|...   154   7e-35
gb|AFK40065.1| unknown [Medicago truncatula]                          152   2e-34
ref|XP_003612244.1| F-box protein [Medicago truncatula] gi|35551...   151   4e-34
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-31

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  174 bits (442), Expect = 5e-41
 Identities = 126/382 (32%), Positives = 188/382 (49%), Gaps = 6/382 (1%)
 Frame = -2

Query: 1482 IFELPTNLLYEIISRLPLKTIFSCRCVCRTLLKLIEDPYFAKTHLNGTLSTSATVIVKEN 1303
            I  LP   L +I+SRLP KTIFSC CVC+    LI  P FAK H     + +   ++  +
Sbjct: 32   ISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHH----TRAPASLILRS 87

Query: 1302 HFSSPYFRPYMLELDFTPKKSSLSSDHHFYHQHIISRQSGEVALRDVKCCFVTGEATLIS 1123
            H      RP  L L         S D        +S   G          F TG   +++
Sbjct: 88   HRHGRRRRPRSLCLLDLEASDICSPDAAVK----LSPDFG----------FPTGNFEIVN 133

Query: 1122 SCNGLLCL---YSPSLKNPTYCICNPVSGECMTLAHPAPFTSDSIYLNHSGFGFCPKTKQ 952
            +CNGL+C+   +SP+       I NP+ G+ +TL  P        Y+  S FG  PKT +
Sbjct: 134  TCNGLICIRHFHSPN----DISILNPLVGDYITL--PLTKKKHKSYV-FSWFGHSPKTDE 186

Query: 951  YKVTRFMSSPSTSRAVALVHTLGTRSWRNI--GEAPRPKSQGSFDCFLDGKLHLITASRN 778
            YKV +F+  P  S+  A +HTLG  +W +I  G    P      + F+ G LH I    +
Sbjct: 187  YKVIQFVQQP--SKLEAEIHTLGKGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIVNDPS 244

Query: 777  ISDVVYSFDLETEKFEPVPMPAHFSPEYRSKVSWISVGVIGGCLCLC-YTSNDAYFEVFA 601
             S+ +Y  +   E F+PV  P H  P  + +   + +GV+GGCL    Y   D+ F+++ 
Sbjct: 245  KSEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDS-FDIWV 303

Query: 600  MGEYGIRESWIKKFEIDVKFYCALRVEDLQKPIKFLNNGELLFLSRFNSLVSYSPQKGTF 421
            M +YG++ESW K+F +       +   DL +PI  L+NGE+L   +  ++VSY+P+  +F
Sbjct: 304  MKQYGVQESWTKEFILKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRSF 363

Query: 420  RDIKSLGNGRAEVIAHVSSFVS 355
            R +K  G    E   +V SF+S
Sbjct: 364  RFLKIYGIQNFEANPYVPSFLS 385


>ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|AES95109.1| F-box
            [Medicago truncatula]
          Length = 480

 Score =  154 bits (389), Expect = 7e-35
 Identities = 131/453 (28%), Positives = 206/453 (45%), Gaps = 49/453 (10%)
 Frame = -2

Query: 1485 PIFE-LPTNLLYEIISRLPLKTIFSCRCVCRTLLKLIEDPYFAKTHLNGTLSTSATVIVK 1309
            P F+ LP++L   I+ RLP K++  C+CVC+    +I +  FAK+H      +  +++++
Sbjct: 25   PYFDKLPSHLTAHILLRLPFKSVLICKCVCKVWKTIISESQFAKSHFE---RSPISLMIR 81

Query: 1308 ENHFSSPYFRPYMLELDFTPKKSSLSSDHH----------------------------FY 1213
              H  S     Y+LE +  P K  + S++H                            F 
Sbjct: 82   TRHRVSRTL--YLLECE--PDKFEIGSNNHVKLAPIFKLPLRSFRDKRDQINNESKRPFR 137

Query: 1212 HQHIISRQSGEVALRDVKCCFVT-----GEATLISSCNGLLCLYSPSLKNPTYCICNPVS 1048
               ++S ++ E + R  +  ++       +  +++SCNGLLCL  PS  NP   ICNPV+
Sbjct: 138  AARLVSGKNDENSDRGRQSLYIACNRDIDKFDIVNSCNGLLCLSDPSFGNPIV-ICNPVT 196

Query: 1047 GECMTLAHPAPFTSDSIYLNHSGFGFCPKTKQYKV-------TRFMSSPSTSRAVALVHT 889
            GE + L       +       +GFGF PKT +YKV        +  +     R +  ++T
Sbjct: 197  GEFIRLPESTTNRTRVRMQGQAGFGFQPKTNEYKVISVWIRHVKHANQWVFERVILEINT 256

Query: 888  LGTRSWRNIGEAPRPK-SQGSFDCFLDGKLHLITASRNISDVVYSFDLETEKFEPVPMPA 712
            LGT SWRN+   P+   S   +   ++G LH I        ++  F  E E+ +  P P 
Sbjct: 257  LGTTSWRNVEVDPQISFSSLKYPTCVNGALHWIRFEGQQRSILV-FCFENERLQSFPSPP 315

Query: 711  H-FSPEYRSKVSWISVGVIGGCLCLCYTSNDAYFEVFAMGEYGIRESWIKKFEIDVKFYC 535
            H F          IS+G + G L +C  +  +   ++ M EYGI ESW K + ID  F  
Sbjct: 316  HVFGNHNVFCCRPISMGELKGFLYICDPTFISNVSMWVMNEYGIGESWTKIYNIDTSFNP 375

Query: 534  ALRVE---DLQKPIKFLNNG-ELLFLSRFNSLVSYSPQKGTFRDIKSLGN--GRAEVIAH 373
              RV     L  PIK    G  +L     N    Y P+K  F+  +  G+     EVI H
Sbjct: 376  LDRVPRGYGLSWPIKHFEEGAAILSYHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPH 435

Query: 372  VSSFVSLKTHVFKRGINYEKIKLKSPMLVQNVS 274
            + S +SLK  +  +G+N E + + S  L+ N+S
Sbjct: 436  IPSLISLKDVL--KGVNIEVLNIHSSDLI-NIS 465


>gb|AFK40065.1| unknown [Medicago truncatula]
          Length = 479

 Score =  152 bits (385), Expect = 2e-34
 Identities = 128/445 (28%), Positives = 201/445 (45%), Gaps = 49/445 (11%)
 Frame = -2

Query: 1485 PIFE-LPTNLLYEIISRLPLKTIFSCRCVCRTLLKLIEDPYFAKTHLNGTLSTSATVIVK 1309
            P F+ LP++L   I+ RLP K++  C+CVC+    +I +  FAK+H      +  +++++
Sbjct: 25   PYFDKLPSHLTAHILLRLPFKSVLICKCVCKVWKTIISESQFAKSHFE---RSPISLMIR 81

Query: 1308 ENHFSSPYFRPYMLELDFTPKKSSLSSDHH----------------------------FY 1213
              H  S     Y+LE +  P K  + S++H                            F 
Sbjct: 82   TRHRVSRTL--YLLECE--PDKFEIGSNNHVKLAPIFKLPLRSFRDKRDQINNESKRPFR 137

Query: 1212 HQHIISRQSGEVALRDVKCCFVT-----GEATLISSCNGLLCLYSPSLKNPTYCICNPVS 1048
               ++S ++ E + R  +  ++       +  +++SCNGLLCL  PS  NP   ICNPV+
Sbjct: 138  AARLVSGKNDENSDRGRQSLYIACNRDIDKFDIVNSCNGLLCLSDPSFGNPIV-ICNPVT 196

Query: 1047 GECMTLAHPAPFTSDSIYLNHSGFGFCPKTKQYKV-------TRFMSSPSTSRAVALVHT 889
            GE + L       +       +GFGF PKT +YKV        +  +     R +  ++T
Sbjct: 197  GEFIRLPESTTNRTRVRMQGQAGFGFQPKTNEYKVISVWIRHVKHANQWVFERVILEINT 256

Query: 888  LGTRSWRNIGEAPRPK-SQGSFDCFLDGKLHLITASRNISDVVYSFDLETEKFEPVPMPA 712
            LGT SWRN+   P+   S   +   ++G LH I        ++  F  E E+ +  P P 
Sbjct: 257  LGTTSWRNVEVDPQISFSSLKYPTCVNGALHWIRFEGQQRSILV-FCFENERLQSFPSPP 315

Query: 711  H-FSPEYRSKVSWISVGVIGGCLCLCYTSNDAYFEVFAMGEYGIRESWIKKFEIDVKFYC 535
            H F          IS+G + G L +C  +  +   ++ M EYGI ESW K + ID  F  
Sbjct: 316  HVFGNHNVFCCRPISMGELKGFLYICDPTFISNVSMWVMNEYGIGESWTKIYNIDTSFNP 375

Query: 534  ALRVE---DLQKPIKFLNNG-ELLFLSRFNSLVSYSPQKGTFRDIKSLGN--GRAEVIAH 373
              RV     L  PIK    G  +L     N    Y P+K  F+  +  G+     EVI H
Sbjct: 376  LDRVPRGYGLSWPIKHFEEGAAILSYHSSNCFTYYEPEKYGFKVFRIHGSRINYFEVIPH 435

Query: 372  VSSFVSLKTHVFKRGINYEKIKLKS 298
            + S +SLK  +  +G+N E + + S
Sbjct: 436  IPSLISLKDVL--KGVNIEVLNIHS 458


>ref|XP_003612244.1| F-box protein [Medicago truncatula] gi|355513579|gb|AES95202.1| F-box
            protein [Medicago truncatula]
          Length = 476

 Score =  151 bits (382), Expect = 4e-34
 Identities = 129/458 (28%), Positives = 206/458 (44%), Gaps = 48/458 (10%)
 Frame = -2

Query: 1527 IDYVKRNTVNELQ-----FPIFE-LPTNLLYEIISRLPLKTIFSCRCVCRTLLKLIEDPY 1366
            ID  +    NE +     FP F+ LP++L   I+ RLP+K +  C+CVC+   +LI +P+
Sbjct: 8    IDAARTKVDNEAESHDELFPFFDNLPSHLTANILLRLPVKPLLICKCVCKIWKRLISEPH 67

Query: 1365 FAKTHLNGT-----------LSTSATVIVKE---NHFSSPYFRPYMLE-------LDFTP 1249
            FAK                 +  S T+ + E     F     +   LE       + F  
Sbjct: 68   FAKLQFERAPLSFMIRTLDDIRVSRTMYLLECEPEKFEIGSNKHVKLEPIFKLPLISFRD 127

Query: 1248 KKSSLSSDHH--FYHQHIISRQSGEVALRD-------VKCCFVTGEATLISSCNGLLCLY 1096
            K+S +S++ +       ++S ++ E   RD         C     +  +++SCNGLLCL 
Sbjct: 128  KRSEISNEFNRPVRAARLVSGKNNENIDRDRTNRYSYTACNKYYDKFDIVNSCNGLLCLS 187

Query: 1095 SPSLKNPTYCICNPVSGECMTLAHPAPFTSDSIYLNHSGFGFCPKTKQYKVTRFM---SS 925
             P+  NP+  ICNPV+GE + L       +    +   GFGF P T +YKV R       
Sbjct: 188  EPTTGNPSV-ICNPVTGEFIRLPEATTNRTRVRMVGQVGFGFQPNTNEYKVIRMWIRHGK 246

Query: 924  PSTSRAVALVHTLGTRSWRNIGEAPRPKSQG-SFDCFLDGKLHLITASRNISDVVYSFDL 748
             +  R +  ++TLGT   RN+   P+       +   ++G LH I        +++ F  
Sbjct: 247  RANDRVILQINTLGTTILRNVEVDPQISFLSLEYPTCVNGALHWIRYENQQRSILF-FCF 305

Query: 747  ETEKFEPVPMPAHFSPEYRSKV--SWISVGVIGGCLCLCYTSNDAYFEVFAMGEYGIRES 574
            E+E+ +  P P H    + S +  +   +G + G L +C  +  +   V+ M EYGI ES
Sbjct: 306  ESERLQSFPSPPHVFGNHNSGIVDNRHIMGELKGFLYICDWTFLSDVSVWVMNEYGIEES 365

Query: 573  WIKKFEIDVKFY---CALRVEDLQKPIKFLNNGELLFLSR-FNSLVSYSPQKGTFRDIKS 406
            W K + ID  F    C +       PIK    G  + L   +N  + Y P+K  F+  + 
Sbjct: 366  WTKVYNIDTSFNPSGCLITWGSGLWPIKHFEEGAAILLYHCYNCFIFYEPEKYGFKVFRI 425

Query: 405  LGNGRA--EVIAHVSSFVSLKTHVFKRGINYEKIKLKS 298
             G+     EVI H+ S +SLK  +  +G N E + + S
Sbjct: 426  HGSHSKFFEVIPHIPSLISLKDVL--KGDNIEVLNIHS 461


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  143 bits (361), Expect = 1e-31
 Identities = 114/410 (27%), Positives = 182/410 (44%), Gaps = 24/410 (5%)
 Frame = -2

Query: 1509 NTVNELQFPIFELPTNLLYEIISRLPLKTIFSCRCVCRTLLKLIEDPYFAKTHLNGTLST 1330
            N V + ++ +  LP ++  +I+ +LPLK+   CRCVCRT   L+ D YF++       S 
Sbjct: 16   NQVQDAEWSMSALPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQS- 74

Query: 1329 SATVIVKENHFSSPYFRPYMLELDFTP----KKSSLSSDHHFYHQHIISRQSGEVALR-- 1168
                               ML L   P    +K++  + + FY   ++  +SG V     
Sbjct: 75   -------------------MLVLRSPPSCVSRKAAALAPNDFY---VVDLESGSVRNNVM 112

Query: 1167 --DVKCCFVTGEATLISSCNGLLCLYSPSLKNPTYCICNPVSGE-------CMTLAHPAP 1015
              + K    T    L+ SCNGLLCL+  + K   Y +CNPV+GE       C        
Sbjct: 113  KLNTKNNLPTCHVELVGSCNGLLCLFDKNSKKVFY-LCNPVTGEHVRTPANCKKEKQRGK 171

Query: 1014 FTSDSIYLNHSGFGFCPKTKQYKVTRFMSSP-----STSRAVALVHTLGTRSWRNIGEAP 850
               D++     GFGF PK+  Y V R          S  R+   +   G   W++IGE P
Sbjct: 172  TILDAVL----GFGFSPKSNHYMVLRITRKKLTYPISILRSEGEICIFGDNEWKSIGEIP 227

Query: 849  RPKSQGSFDCFLDGKLHLITASRNI--SDVVYSFDLETEKFEPVPMPAHFSPEYRSKVSW 676
             P  +  F   L+G LH I    +   +D++ + D++++K  P+  P  F    R   + 
Sbjct: 228  FPDCKKFFGVSLNGALHWILNLDDYEDADLICALDIDSKKIRPMSPPNGF----RRDTTE 283

Query: 675  ISVGVIGGCLCLCYTSNDAYFEVFAMGEYGIRESWIKKFEIDVKFYCALRVEDLQKPIKF 496
            +++GV+  CL +C +      +++ M EYG+++SW K+  I      +       +PI  
Sbjct: 284  MTLGVLRDCLFICDSMTLYNLDIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMV 343

Query: 495  LNNGELLFLSRFNSLVSYSPQKGTFRDI--KSLGNGRAEVIAHVSSFVSL 352
              +GE+L  S  N  V Y P   +F  +   S      E +  V+SF SL
Sbjct: 344  SKDGEVLISSDSNVFVWYDPGSKSFTKVTLPSRVGYEFEAVCSVASFDSL 393


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