BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021501
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   254   5e-85
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   248   1e-84
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   249   2e-83
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ...   249   2e-83
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              254   2e-82

>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  254 bits (648), Expect(2) = 5e-85
 Identities = 129/167 (77%), Positives = 148/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 SGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGMQVTKVARTLAAKSGEPGTEQKPC 319
           +GSGKTL YLLLIFSV++T+ S VQALI+VPTRELG+QVTKVAR LAAK  EP  EQK C
Sbjct: 125 TGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSC 184

Query: 318 TVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQMLDKNILKLESIRVLVIDEVDFMFN 139
           TVMALLDGG L+RHKSWLKAEPPTIVVAT+ SL QML+K I KLES+RVLVIDEVDFMFN
Sbjct: 185 TVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFN 244

Query: 138 SSKQISAVRKLLNLYSA-NSRQTIFASASVPQHNRFLYDCIQQKWTK 1
           +SKQ+ ++RKLL  YS+ N+RQT+FASAS+PQH RFL+DCIQQKWTK
Sbjct: 245 ASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTK 291



 Score = 87.8 bits (216), Expect(2) = 5e-85
 Identities = 41/64 (64%), Positives = 53/64 (82%)
 Frame = -1

Query: 686 ASLVSADVVTEQTNKSTLRELCQGHVPEHVLRRAEDVGYVLPTDVQEQALPILFSGRDCI 507
           +S+  A  + E+T   TLRE+CQG VPEHVLRR E+VG+++PTDVQ+QALP+L SGRDCI
Sbjct: 63  SSITEASDIGERT--LTLREICQGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCI 120

Query: 506 LHSQ 495
           LH+Q
Sbjct: 121 LHAQ 124


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  248 bits (632), Expect(2) = 1e-84
 Identities = 126/167 (75%), Positives = 146/167 (87%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 SGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGMQVTKVARTLAAKSGEPGTEQKPC 319
           +GSGKTLAYLL I SV+ ++RS VQALI+VPTRELGMQVTKVAR LAAK  E  +  K C
Sbjct: 113 TGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSC 172

Query: 318 TVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQMLDKNILKLESIRVLVIDEVDFMFN 139
           TVMALLDGG L RHKSWLKAEPPTIVVATMGSL QML+K+ILKL+S +VLV+DEVDFMFN
Sbjct: 173 TVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFN 232

Query: 138 SSKQISAVRKLLNLYS-ANSRQTIFASASVPQHNRFLYDCIQQKWTK 1
           SSK+IS++++LL  YS + +RQTIFASAS+PQH RFLYDC+QQKWTK
Sbjct: 233 SSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279



 Score = 92.8 bits (229), Expect(2) = 1e-84
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = -1

Query: 695 SIRASLVSADVVTEQTNKSTLRELCQGHVPEHVLRRAEDVGYVLPTDVQEQALPILFSGR 516
           S   S V A   T+ ++ +TLRELC GHVPEHV+RR E+VGYV+PT+VQ QALP L+SGR
Sbjct: 46  SFSTSDVEARTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGR 105

Query: 515 DCILHSQ 495
           DC+LH+Q
Sbjct: 106 DCVLHAQ 112


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  249 bits (636), Expect(2) = 2e-83
 Identities = 126/167 (75%), Positives = 148/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 SGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGMQVTKVARTLAAKSGEPGTEQKPC 319
           +GSGKTLAYLL + SV+ ++RS VQALI+VPTRELGMQVTKVARTLAAK  E  +  K C
Sbjct: 113 TGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSC 172

Query: 318 TVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQMLDKNILKLESIRVLVIDEVDFMFN 139
           TVMALLDGG L RHKSWLKAEPPTIVVATMGSL QML+K+ILKL+S +VLV+DEVDFMFN
Sbjct: 173 TVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFN 232

Query: 138 SSKQISAVRKLLNLYSAN-SRQTIFASASVPQHNRFLYDCIQQKWTK 1
           SSK+IS++++LL  YS++ +RQTIFASAS+PQH RFLYDC+QQKWTK
Sbjct: 233 SSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279



 Score = 87.0 bits (214), Expect(2) = 2e-83
 Identities = 39/67 (58%), Positives = 51/67 (76%)
 Frame = -1

Query: 695 SIRASLVSADVVTEQTNKSTLRELCQGHVPEHVLRRAEDVGYVLPTDVQEQALPILFSGR 516
           S   S + A   T+ ++ +T RELC GHVPEHV+RR E+VGYV+PT+VQ  ALP L+SGR
Sbjct: 46  SFSTSDIEARTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGR 105

Query: 515 DCILHSQ 495
           DC+LH+Q
Sbjct: 106 DCVLHAQ 112


>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 365

 Score =  249 bits (636), Expect(2) = 2e-83
 Identities = 126/167 (75%), Positives = 148/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 SGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGMQVTKVARTLAAKSGEPGTEQKPC 319
           +GSGKTLAYLL + SV+ ++RS VQALI+VPTRELGMQVTKVARTLAAK  E  +  K C
Sbjct: 113 TGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSC 172

Query: 318 TVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQMLDKNILKLESIRVLVIDEVDFMFN 139
           TVMALLDGG L RHKSWLKAEPPTIVVATMGSL QML+K+ILKL+S +VLV+DEVDFMFN
Sbjct: 173 TVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFN 232

Query: 138 SSKQISAVRKLLNLYSAN-SRQTIFASASVPQHNRFLYDCIQQKWTK 1
           SSK+IS++++LL  YS++ +RQTIFASAS+PQH RFLYDC+QQKWTK
Sbjct: 233 SSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279



 Score = 87.0 bits (214), Expect(2) = 2e-83
 Identities = 39/67 (58%), Positives = 51/67 (76%)
 Frame = -1

Query: 695 SIRASLVSADVVTEQTNKSTLRELCQGHVPEHVLRRAEDVGYVLPTDVQEQALPILFSGR 516
           S   S + A   T+ ++ +T RELC GHVPEHV+RR E+VGYV+PT+VQ  ALP L+SGR
Sbjct: 46  SFSTSDIEARTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGR 105

Query: 515 DCILHSQ 495
           DC+LH+Q
Sbjct: 106 DCVLHAQ 112


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  254 bits (648), Expect(2) = 2e-82
 Identities = 129/167 (77%), Positives = 148/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 SGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGMQVTKVARTLAAKSGEPGTEQKPC 319
           +GSGKTL YLLLIFSV++T+ S VQALI+VPTRELG+QVTKVAR LAAK  EP  EQK C
Sbjct: 129 TGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSC 188

Query: 318 TVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQMLDKNILKLESIRVLVIDEVDFMFN 139
           TVMALLDGG L+RHKSWLKAEPPTIVVAT+ SL QML+K I KLES+RVLVIDEVDFMFN
Sbjct: 189 TVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFN 248

Query: 138 SSKQISAVRKLLNLYSA-NSRQTIFASASVPQHNRFLYDCIQQKWTK 1
           +SKQ+ ++RKLL  YS+ N+RQT+FASAS+PQH RFL+DCIQQKWTK
Sbjct: 249 ASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTK 295



 Score = 79.0 bits (193), Expect(2) = 2e-82
 Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
 Frame = -1

Query: 686 ASLVSADVVTEQTNKSTLRELCQGHVPEHVLR----RAEDVGYVLPTDVQEQALPILFSG 519
           +S+  A  + E+T   TLRE+CQG VPEHV+     R E+VG+++PTDVQ+QALP+L SG
Sbjct: 63  SSITEASDIGERT--LTLREICQGCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSG 120

Query: 518 RDCILHSQ 495
           RDCILH+Q
Sbjct: 121 RDCILHAQ 128