BLASTX nr result

ID: Cnidium21_contig00021459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021459
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33881.3| unnamed protein product [Vitis vinifera]               88   4e-15
ref|XP_002303227.1| predicted protein [Populus trichocarpa] gi|2...    71   5e-10
ref|XP_002441998.1| hypothetical protein SORBIDRAFT_08g006710 [S...    70   1e-09
ref|XP_002519381.1| Serine/threonine-protein kinase PBS1, putati...    68   4e-09
ref|NP_001066400.1| Os12g0210400 [Oryza sativa Japonica Group] g...    68   6e-09

>emb|CBI33881.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 78/234 (33%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
 Frame = -3

Query: 1264 LENVD-IHTSSPNPATTCIYEVNESSNALHESE--YPSVSRDDQVDGVTHKDEAQETNTK 1094
            L+NVD I TS P  A    +E +E+ +A  E         R D V      D     +T 
Sbjct: 302  LDNVDSISTSLPTLANVYSHEASETVDAADEISTCLSGGGRGDVVQVHEDGDVPHRVDTP 361

Query: 1093 LPLGATYPTNNLVESSDKDDTLGVGTILPPGTSIPMKDNGNGINVFSPSVLQEYDAKVNA 914
            +PLG T         S  D TL               D+   I+  SP    + +  +N 
Sbjct: 362  MPLGVT---------SCFDGTL---------------DHTQNISTTSPCRDHDGNQHINE 397

Query: 913  D-----YPQTPPRSSSPDIYKDESPEFKLYIQPSHQKLVNQVSNKRQSKKEVESAETLQA 749
            +     +PQTPPRS SPDIY +E PE    I   H +  NQV+ K+   K +E +   +A
Sbjct: 398  NCKSKIHPQTPPRSPSPDIYAEEPPEVSYNIPRGHLRQKNQVACKKPLNKALEDSRKREA 457

Query: 748  RRLLKAMPSGRRKSLLAAMAGQFSEFS-HKNKRRKRMEVTPNKYDSPSTTHRKS 590
             +L K MP+ R   L+AAM G  SE S  K K ++RME + N  +S +   RKS
Sbjct: 458  CKLCKNMPASRSMRLMAAMKGSQSEGSLGKKKSKRRMESSANG-ESNTRARRKS 510


>ref|XP_002303227.1| predicted protein [Populus trichocarpa] gi|222840659|gb|EEE78206.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = -3

Query: 568 ALNVLKSSWKKLPLNWKGADPCNSSWV*VVGNYTRVTIMKLGGMGLVGTSLTDVTSFSEL 389
           AL  LK  WK +P  W GADPC S W  ++   +RVT + L  MGL G+   D+ S SEL
Sbjct: 30  ALKALKDIWKNVPPTWVGADPCGSRWEGILCANSRVTSITLASMGLKGSLSGDIQSLSEL 89

Query: 388 VLLML-VGRGLFGPIPESISGRPRLESL 308
            +L L   +GL GP+P +I    +L +L
Sbjct: 90  QILDLSYNKGLSGPLPSAIGDLKKLTNL 117


>ref|XP_002441998.1| hypothetical protein SORBIDRAFT_08g006710 [Sorghum bicolor]
           gi|241942691|gb|EES15836.1| hypothetical protein
           SORBIDRAFT_08g006710 [Sorghum bicolor]
          Length = 962

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = -3

Query: 571 AALNVLKSSWKKLPLNWKGADPCNSSWV*VVGNYTRVTIMKLGGMGLVGTSLTDVTSFSE 392
           A LN +K SW K P NW G DPC   W+ +     RVT ++L  +GL G+   D+ S SE
Sbjct: 30  AGLNGIKDSWNKKPSNWVGTDPCGDKWIGIDCTGDRVTSIRLSSLGLSGSLSGDIQSLSE 89

Query: 391 LVLL-MLVGRGLFGPIPESISGRPRLESL 308
           L  L     + L GP+P SI     LE+L
Sbjct: 90  LQTLDFSYNKDLGGPLPASIGSLSNLENL 118


>ref|XP_002519381.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223541448|gb|EEF42998.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 960

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -3

Query: 571 AALNVLKSSWKKLPLNWKGADPCNSSWV*VVGNYTRVTIMKLGGMGLVGTSLTDVTSFSE 392
           +ALN LK  W+  P +WKGADPC   W  +     RVT + L  +G+ G    D+++  E
Sbjct: 36  SALNALKDIWQNTPPSWKGADPCGDKWEGIECTNLRVTSITLSSIGITGQLSGDISNLQE 95

Query: 391 LVLLML-VGRGLFGPIPESISGRPRLESL 308
           L +L L   +GL G +PESI    +L +L
Sbjct: 96  LQILDLSYNKGLEGTLPESIGNLKKLTNL 124


>ref|NP_001066400.1| Os12g0210400 [Oryza sativa Japonica Group]
           gi|77553907|gb|ABA96703.1| Leucine Rich Repeat family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113648907|dbj|BAF29419.1| Os12g0210400 [Oryza sativa
           Japonica Group] gi|215697087|dbj|BAG91081.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 967

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = -3

Query: 571 AALNVLKSSWKKLPLNWKGADPCNSSWV*VVGNYTRVTIMKLGGMGLVGTSLTDVTSFSE 392
           + LN L  SW   P NW G DPC   W+ ++    RVT ++L   GL GT   D+ S SE
Sbjct: 31  SGLNGLAGSWGSAPSNWAGNDPCGDKWIGIICTGNRVTSIRLSSFGLSGTLSGDIQSLSE 90

Query: 391 LVLLML-VGRGLFGPIPESISGRPRLESL 308
           L  L L   + L GP+P +I    +L++L
Sbjct: 91  LQYLDLSYNKNLNGPLPSTIGTLSKLQNL 119


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