BLASTX nr result

ID: Cnidium21_contig00021455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021455
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]           139   2e-30
emb|CAN60303.1| hypothetical protein VITISV_018540 [Vitis vinifera]   128   3e-27
ref|XP_002281144.1| PREDICTED: dof zinc finger protein DOF3.6-li...   127   4e-27
ref|XP_002299879.1| f-box family protein [Populus trichocarpa] g...   119   1e-24
ref|XP_003547369.1| PREDICTED: dof zinc finger protein DOF3.6-li...   117   5e-24

>emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]
          Length = 324

 Score =  139 bits (349), Expect = 2e-30
 Identities = 96/255 (37%), Positives = 125/255 (49%), Gaps = 13/255 (5%)
 Frame = +2

Query: 2   NNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXPNITNNNNQKGXX 181
           NNY+L+QPRHFCKTCRRYWTRGGALRSVPVGGGC              + T  +N     
Sbjct: 87  NNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKSNNNNNSSKTAGSNVNTNT 146

Query: 182 XXXXXXXXXXXXXADQMVANHNNPFSSQ-----VPLMAALQNLNSHYGAAAGSTYGGFQM 346
                            + N  + FS +      PLMAA QNLN HYG            
Sbjct: 147 IASGTSTSASPSSCSTEIMNGRHHFSHEQPPQLTPLMAAFQNLNHHYGGFQPPPLVSTHH 206

Query: 347 GNGSSG---QSEMGFQLGHN-NTSNVTNNILSSGGAQGTWRLPILTGFEQPSGSNLFSYQ 514
           GNG+       EMGFQ+G + NT+N+   +   GG+   WRLP L      + +NL+ +Q
Sbjct: 207 GNGTGALGHHHEMGFQIGSSTNTNNLP--VPPGGGSDHQWRLPSLA-----ANTNLYPFQ 259

Query: 515 ---GEGI-EAASAGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXXXXQYWGTGGGNSW 682
               +GI E++S     +      GLN ++QFLG  +            QYW   GGN+W
Sbjct: 260 HGTDQGIHESSSVNNNNINAHDDQGLNSTKQFLGTMEN--------NTNQYW---GGNAW 308

Query: 683 TTDFTSHINNTSSAS 727
           T    S +N++SSAS
Sbjct: 309 TG--FSGLNSSSSAS 321


>emb|CAN60303.1| hypothetical protein VITISV_018540 [Vitis vinifera]
          Length = 320

 Score =  128 bits (321), Expect = 3e-27
 Identities = 96/268 (35%), Positives = 124/268 (46%), Gaps = 26/268 (9%)
 Frame = +2

Query: 2   NNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXPNITNNNNQKGXX 181
           NNYSLTQPRHFCKTCRRYWTRGGALR+VPVGGGC             P  T  +      
Sbjct: 82  NNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKSSSSKSPASTERH------ 135

Query: 182 XXXXXXXXXXXXXADQMVANHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGG---FQMGN 352
                            +  H    +SQ+P M  LQNL  +        +GG     M +
Sbjct: 136 -AGSNSTSAIPSSGTAEIIGHLPKQASQLPFMPTLQNLTQYGIGNMSLNFGGNLPHXMAS 194

Query: 353 GSSGQSEMGFQLGHNNTSNVTNNILSSGGAQGTWRL------PILTGFEQPSGSNLFSYQ 514
              GQ+EMGF +G N+        LS+ G +  WRL      P L  FE P+G  L+ +Q
Sbjct: 195 SGGGQNEMGFHIGSNSVG------LSAEGVE-QWRLQQVQQFPFLGSFEPPTG--LYPFQ 245

Query: 515 GEGIEAAS-----------------AGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXX 643
            E ++A+S                 A    V+     GLNLSRQFL  S+          
Sbjct: 246 NEDVKASSSVDRNGHLPHMVSGSGVAQLTAVKLLENQGLNLSRQFLDTSEN--------- 296

Query: 644 XXQYWGTGGGNSWTTDFTSHINNTSSAS 727
             QYW    GN+W TDF S +N++S+++
Sbjct: 297 -NQYW---VGNAW-TDF-SGLNSSSTSN 318


>ref|XP_002281144.1| PREDICTED: dof zinc finger protein DOF3.6-like [Vitis vinifera]
          Length = 320

 Score =  127 bits (320), Expect = 4e-27
 Identities = 96/268 (35%), Positives = 124/268 (46%), Gaps = 26/268 (9%)
 Frame = +2

Query: 2   NNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXPNITNNNNQKGXX 181
           NNYSLTQPRHFCKTCRRYWTRGGALR+VPVGGGC             P  T  +      
Sbjct: 82  NNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKSSSSKSPASTERH------ 135

Query: 182 XXXXXXXXXXXXXADQMVANHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGG---FQMGN 352
                            +  H    +SQ+P M  LQNL  +        +GG     M +
Sbjct: 136 -AGSNSTSAIPSSGTAEIIGHLPKQASQLPFMPTLQNLTQYGIGNMSLNFGGNLPHVMAS 194

Query: 353 GSSGQSEMGFQLGHNNTSNVTNNILSSGGAQGTWRL------PILTGFEQPSGSNLFSYQ 514
              GQ+EMGF +G N+        LS+ G +  WRL      P L  FE P+G  L+ +Q
Sbjct: 195 SGGGQNEMGFHIGSNSVG------LSAEGVE-QWRLQQVQQFPFLGSFEPPTG--LYPFQ 245

Query: 515 GEGIEAAS-----------------AGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXX 643
            E ++A+S                 A    V+     GLNLSRQFL  S+          
Sbjct: 246 NEDVKASSSVDRNGHLPHMVSGSGVAQLTAVKLLENQGLNLSRQFLDTSEN--------- 296

Query: 644 XXQYWGTGGGNSWTTDFTSHINNTSSAS 727
             QYW    GN+W TDF S +N++S+++
Sbjct: 297 -NQYW---VGNAW-TDF-SGLNSSSTSN 318


>ref|XP_002299879.1| f-box family protein [Populus trichocarpa]
           gi|222847137|gb|EEE84684.1| f-box family protein
           [Populus trichocarpa]
          Length = 332

 Score =  119 bits (299), Expect = 1e-24
 Identities = 89/264 (33%), Positives = 121/264 (45%), Gaps = 23/264 (8%)
 Frame = +2

Query: 2   NNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXPNITNNNNQKGXX 181
           NNY+L+QPRHFCKTCRRYWTRGGALRSVPVGGGC               + +++      
Sbjct: 97  NNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKR--------KVQSSSKSPVSS 148

Query: 182 XXXXXXXXXXXXXADQMVANHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGGFQ----MG 349
                            V  H     SQ+P M +L NL        G  +GG Q      
Sbjct: 149 ERQVGSTSSSTSALPSQVIGHLPQQQSQLPYMTSLHNLAQFGEGNIGLNFGGIQGQLGST 208

Query: 350 NGSSGQSEMGFQLGHNNTSNVTNNILSSGGAQGTWRLPILTGFEQPSGSNLFSYQGEGIE 529
           +G+SGQ++MGFQ+G N+  N ++ ILS+GG     + P    F + S + L+  Q EG E
Sbjct: 209 SGASGQTDMGFQIGSNSGMN-SSAILSAGGVH---QFP----FFEFSPAGLYPLQSEGAE 260

Query: 530 -------------------AASAGPVKVEETRGGGLNLSRQFLGVSDQXXXXXXXXXXXQ 652
                               +   PVK E  +  GLNLS+ +LG                
Sbjct: 261 TPISVHGDNQLQSMTSSSRVSQLAPVKTEGNQ--GLNLSKPYLGAPQN---------NQY 309

Query: 653 YWGTGGGNSWTTDFTSHINNTSSA 724
           YW   GGN+W     S +N++S++
Sbjct: 310 YW---GGNTWAD--LSGLNSSSTS 328


>ref|XP_003547369.1| PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max]
          Length = 304

 Score =  117 bits (293), Expect = 5e-24
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
 Frame = +2

Query: 2   NNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCXXXXXXXXXXXXXPNITNNNNQKGXX 181
           NNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGGC             P  T+  +     
Sbjct: 87  NNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKHKRSRSKSPVSTDKPS----- 141

Query: 182 XXXXXXXXXXXXXADQMVANHNNPFSSQVPLMAALQNLNSHYGAAAGSTYGGFQMGNGSS 361
                          +++     PF      +A+LQ++N +     G      Q  NG  
Sbjct: 142 ------LPNSTSAIPELIGRFPQPF------IASLQSMNRYGVGNTGVNLREIQAQNG-- 187

Query: 362 GQSEMGFQLGHNNTSNVTNNILSSGGAQGTWR---LPILTGFEQP-SGSNLFSYQGEGIE 529
             S+MGFQ+G +   N T+++ ++GG    WR    P L GFE   + SN + +Q E +E
Sbjct: 188 --SQMGFQIGGH--GNGTSSVATAGGGVEQWRFQQFPFLNGFESTLAVSNSYPFQSESVE 243

Query: 530 A----------ASAGPVKVEETRGGGLNLSRQFLGVSD 613
                      A+  P +V+    GGLNLSR  L VS+
Sbjct: 244 GLVGDIAASSRATQLPARVKMEYNGGLNLSRSPLSVSE 281


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