BLASTX nr result

ID: Cnidium21_contig00021432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021432
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274315.1| PREDICTED: rae1-like protein At1g80670 [Viti...    66   3e-09
gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]                    65   6e-09
gb|AFP49337.1| RNA export protein, partial [Olea europaea]             65   8e-09
ref|XP_002304718.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative ...    64   1e-08

>ref|XP_002274315.1| PREDICTED: rae1-like protein At1g80670 [Vitis vinifera]
           gi|297743618|emb|CBI36485.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 266 VCYDWSKGAENHNPSTAKTNIFLHVPQESEV 174
           VCYDWSKGAENHNPSTAK +IFLH+PQESEV
Sbjct: 304 VCYDWSKGAENHNPSTAKNHIFLHLPQESEV 334


>gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]
          Length = 347

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 266 VCYDWSKGAENHNPSTAKTNIFLHVPQESEV 174
           VCYDWSKGAENHNPSTAKT I+LH PQESEV
Sbjct: 305 VCYDWSKGAENHNPSTAKTYIYLHFPQESEV 335


>gb|AFP49337.1| RNA export protein, partial [Olea europaea]
          Length = 61

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -2

Query: 266 VCYDWSKGAENHNPSTAKTNIFLHVPQESEV 174
           VCYDWSKGAENHNP+TAKT I+LH+PQESEV
Sbjct: 19  VCYDWSKGAENHNPATAKTYIYLHLPQESEV 49


>ref|XP_002304718.1| predicted protein [Populus trichocarpa] gi|222842150|gb|EEE79697.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -2

Query: 266 VCYDWSKGAENHNPSTAKTNIFLHVPQESEV 174
           VCYDWSKGAENHNP+TAKT I+LH+PQESEV
Sbjct: 307 VCYDWSKGAENHNPATAKTYIYLHLPQESEV 337


>ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
           gi|223533320|gb|EEF35072.1| plant poly(A)+ RNA export
           protein, putative [Ricinus communis]
          Length = 349

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -2

Query: 266 VCYDWSKGAENHNPSTAKTNIFLHVPQESEV 174
           VCYDWSKGAENHNP TAKT I+LH+PQESEV
Sbjct: 307 VCYDWSKGAENHNPQTAKTYIYLHLPQESEV 337


Top