BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021410
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   442   e-121
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   424   e-116
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              424   e-116
dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]      377   e-102
ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thal...   377   e-102

>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  442 bits (1136), Expect = e-121
 Identities = 229/394 (58%), Positives = 287/394 (72%)
 Frame = +2

Query: 2    GYVKAQTFILQAKNRGITTLYVSARQQSGREIVSQCIKVEVYAPLSIRPSNIYLVPGASY 181
            GYV    F + AK+ GITTLYVSA+QQSG EI+SQ IK+EVYAPL + P +I+LVPG+SY
Sbjct: 1103 GYVLGPKFKIIAKDLGITTLYVSAKQQSGHEILSQPIKIEVYAPLRVHPQDIFLVPGSSY 1162

Query: 182  VLTVEGGPTIGGYVEYESLDDETAIIHKSFGRLSAIAPGNTTLVARFHSNSDKVMCHAFG 361
            VLTV+GGPTIG YVEY SLDD  A + +S G+LS I+PGNTT+++  + N D V+C A+G
Sbjct: 1163 VLTVKGGPTIGVYVEYASLDDGIATVDRSSGQLSGISPGNTTILSTVYGNGDVVICQAYG 1222

Query: 362  NVAVAVPPSIMLNVQSEQVAIGSDMPIYPSFANGNLFSLYEPCKKYEWRVEDEDVLTFKV 541
            +V V VP S MLNVQSEQ+ +G ++PIYPSF  G+LFS+YE CKKY+W V+DE VL F  
Sbjct: 1223 DVKVGVPSSAMLNVQSEQLDVGRNVPIYPSFLEGDLFSIYELCKKYKWTVDDEKVLDFYK 1282

Query: 542  TDLLHGHKHGSSSLDLEENGSNDNLDPRFIRVLYGKSSGRTHVNVSLSCNFVSRSFSQSS 721
               LHG K+     D +E G        F++VLYG+S+GRT V VS SC+FVS S+S++ 
Sbjct: 1283 AGGLHGEKNWLQLNDEKELG--------FMKVLYGRSAGRTSVAVSFSCDFVSTSYSETR 1334

Query: 722  FYTASITLYVVPDLPLALGKPATWVLPPHYITSNLLPSSSESYGQGDAQSSKGTITYSLL 901
             Y ASI+L VVP LPLALG P TW+LPPHYITS++LPSS ES+GQ D QS KG ITYSLL
Sbjct: 1335 LYDASISLLVVPYLPLALGLPITWILPPHYITSSILPSSLESHGQWDGQSHKGIITYSLL 1394

Query: 902  KEYGGQNNIELLNEAISIGSVKIQTRESNNIGCIQAKDRLTGRFEIASCVRVAEVAQIRV 1081
            +    + N     +AISI   +I+T ESNN+ CIQ KDR TGR EIASCVRVAEVAQIR+
Sbjct: 1395 RSC--EKNEGWHKDAISIDGDRIKTMESNNLACIQGKDRTTGRVEIASCVRVAEVAQIRI 1452

Query: 1082 SRHAFPFHNVDLAVGAELSVPLIYYDAFGIVLYD 1183
            +   FPFH + +AV  EL + + Y+DA G   Y+
Sbjct: 1453 TNKEFPFHVIHVAVNTELDLSISYFDALGNPFYE 1486


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  424 bits (1091), Expect = e-116
 Identities = 221/392 (56%), Positives = 283/392 (72%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    GYVKAQTFILQAKNRGITTLYVSARQQSGREIVSQCIKVEVYAPLSIRPSNIYLVPGASY 181
            GYV +  F++ AK+ G+T LYVSARQ SG EI S  IKVEVYAP  I P +I+LVPGA+Y
Sbjct: 1189 GYVNSPKFMILAKHLGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAY 1248

Query: 182  VLTVEGGPTIGGYVEYESLDDETAIIHKSFGRLSAIAPGNTTLVARFHSNSDKVMCHAFG 361
            VL V+GGP IG  +EY SLDD  A ++KS GRLSAI+PGN+TLVA  +   D V+C A+G
Sbjct: 1249 VLNVKGGPQIGVVIEYASLDDRIATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYG 1308

Query: 362  NVAVAVPPSIMLNVQSEQVAIGSDMPIYPSFANGNLFSLYEPCKKYEWRVEDEDVLTFKV 541
             + V VP  + LNVQSEQ+ +G +MPI+PS   G+LFS YE CK Y+W VEDE VL+F +
Sbjct: 1309 RIKVGVPSLVTLNVQSEQLDVGREMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHM 1368

Query: 542  TDLLHGHKHG---SSSLDLEENGSNDNLDPRFIRVLYGKSSGRTHVNVSLSCNFVSRSFS 712
             + + G ++G   S S +++  G  D  D  FI +LYG+S+GRT V VS +C+F+S   S
Sbjct: 1369 AEHIRGDRYGLPSSGSKEIKLPGHLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHS 1428

Query: 713  QSSFYTASITLYVVPDLPLALGKPATWVLPPHYITSNLLPSSSESYGQGDAQSSKGTITY 892
            QS  Y+AS+++ VV +LPLA G P TWVLPP+Y TS+LLPSSSESYGQ D  S KGTITY
Sbjct: 1429 QSRSYSASMSISVVSELPLAFGVPITWVLPPYYTTSSLLPSSSESYGQWDL-SRKGTITY 1487

Query: 893  SLLKEYGGQNNIELLNEAISIGSVKIQTRESNNIGCIQAKDRLTGRFEIASCVRVAEVAQ 1072
            SLL+  GG+N  E+  +AISI   +I+T ESNN+ CIQAKDR TG+  IASCVRVAEVAQ
Sbjct: 1488 SLLRSCGGKNE-EVQKDAISIDRDRIKTTESNNLACIQAKDRTTGKTGIASCVRVAEVAQ 1546

Query: 1073 IRVSRHAFPFHNVDLAVGAELSVPLIYYDAFG 1168
            IR++   F FH +DLAV AE+ +P+ + D  G
Sbjct: 1547 IRITPQKFSFHVIDLAVDAEVKLPINFCDVLG 1578


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  424 bits (1091), Expect = e-116
 Identities = 221/392 (56%), Positives = 283/392 (72%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    GYVKAQTFILQAKNRGITTLYVSARQQSGREIVSQCIKVEVYAPLSIRPSNIYLVPGASY 181
            GYV +  F++ AK+ G+T LYVSARQ SG EI S  IKVEVYAP  I P +I+LVPGA+Y
Sbjct: 1114 GYVNSPKFMILAKHLGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAY 1173

Query: 182  VLTVEGGPTIGGYVEYESLDDETAIIHKSFGRLSAIAPGNTTLVARFHSNSDKVMCHAFG 361
            VL V+GGP IG  +EY SLDD  A ++KS GRLSAI+PGN+TLVA  +   D V+C A+G
Sbjct: 1174 VLNVKGGPQIGVVIEYASLDDRIATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYG 1233

Query: 362  NVAVAVPPSIMLNVQSEQVAIGSDMPIYPSFANGNLFSLYEPCKKYEWRVEDEDVLTFKV 541
             + V VP  + LNVQSEQ+ +G +MPI+PS   G+LFS YE CK Y+W VEDE VL+F +
Sbjct: 1234 RIKVGVPSLVTLNVQSEQLDVGREMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHM 1293

Query: 542  TDLLHGHKHG---SSSLDLEENGSNDNLDPRFIRVLYGKSSGRTHVNVSLSCNFVSRSFS 712
             + + G ++G   S S +++  G  D  D  FI +LYG+S+GRT V VS +C+F+S   S
Sbjct: 1294 AEHIRGDRYGLPSSGSKEIKLPGHLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHS 1353

Query: 713  QSSFYTASITLYVVPDLPLALGKPATWVLPPHYITSNLLPSSSESYGQGDAQSSKGTITY 892
            QS  Y+AS+++ VV +LPLA G P TWVLPP+Y TS+LLPSSSESYGQ D  S KGTITY
Sbjct: 1354 QSRSYSASMSISVVSELPLAFGVPITWVLPPYYTTSSLLPSSSESYGQWDL-SRKGTITY 1412

Query: 893  SLLKEYGGQNNIELLNEAISIGSVKIQTRESNNIGCIQAKDRLTGRFEIASCVRVAEVAQ 1072
            SLL+  GG+N  E+  +AISI   +I+T ESNN+ CIQAKDR TG+  IASCVRVAEVAQ
Sbjct: 1413 SLLRSCGGKNE-EVQKDAISIDRDRIKTTESNNLACIQAKDRTTGKTGIASCVRVAEVAQ 1471

Query: 1073 IRVSRHAFPFHNVDLAVGAELSVPLIYYDAFG 1168
            IR++   F FH +DLAV AE+ +P+ + D  G
Sbjct: 1472 IRITPQKFSFHVIDLAVDAEVKLPINFCDVLG 1503


>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score =  377 bits (968), Expect = e-102
 Identities = 198/390 (50%), Positives = 261/390 (66%), Gaps = 1/390 (0%)
 Frame = +2

Query: 5    YVKAQTFILQAKNRGITTLYVSARQQSGREIVSQCIKVEVYAPLSIRPSNIYLVPGASYV 184
            +V   +F + A+  GITTLYVSARQQSG +++SQ IKVEVY+P  + P  I+LVPGASYV
Sbjct: 1114 HVATSSFKIAARRLGITTLYVSARQQSGGKVLSQTIKVEVYSPPRLHPQGIFLVPGASYV 1173

Query: 185  LTVEGGPTIGGYVEYESLDDETAIIHKSFGRLSAIAPGNTTLVARFHSNSDKVMCHAFGN 364
            LT+EGGPT+   V+Y ++D+E A I KS GRL A +PGNTT+ A  + +   V+C A GN
Sbjct: 1174 LTIEGGPTMNVSVDYTTVDNEVAKIEKS-GRLYATSPGNTTIYATIYGSEGAVICQAIGN 1232

Query: 365  VAVAVPPSIMLNVQSEQVAIGSDMPIYPSFANGNLFSLYEPCKKYEWRVEDEDVLTFKVT 544
              V +P + ML  QS+ VA+G +MP+ PSF  G+L S YE C  Y+W +EDE VL F   
Sbjct: 1233 AEVGLPATAMLVAQSDTVAVGHEMPVSPSFPEGDLLSFYELCSAYKWTIEDEKVLIFI-- 1290

Query: 545  DLLHGHKHGSSSLDLEENGSNDNLDPRFIRVLYGKSSGRTHVNVSLSCNFVSRS-FSQSS 721
                     +SS+++EEN         F+ V+ G+S+G+T V ++ SC+FVS   +S+S 
Sbjct: 1291 ---------ASSINVEENAG-------FVNVVQGRSAGKTRVTIAFSCDFVSPGLYSESR 1334

Query: 722  FYTASITLYVVPDLPLALGKPATWVLPPHYITSNLLPSSSESYGQGDAQSSKGTITYSLL 901
             Y AS+ L VVPDLPL+LG P TWVLPP Y +S LLPSSSE     D QS +G I YS+L
Sbjct: 1335 TYEASMILSVVPDLPLSLGAPMTWVLPPFYTSSGLLPSSSEPQKHRDGQSHRGNIVYSIL 1394

Query: 902  KEYGGQNNIELLNEAISIGSVKIQTRESNNIGCIQAKDRLTGRFEIASCVRVAEVAQIRV 1081
            K+   + + E   + ISI    ++T +SNN+ CIQAKDR +GR EIA+CVRVAEVAQIR+
Sbjct: 1395 KDCSSRADFE--RDTISINGGSVKTTDSNNVACIQAKDRTSGRIEIAACVRVAEVAQIRM 1452

Query: 1082 SRHAFPFHNVDLAVGAELSVPLIYYDAFGI 1171
                 PFH +DLAVG EL +P+ YYD  GI
Sbjct: 1453 KSEGIPFHVIDLAVGGELELPINYYDTLGI 1482


>ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thaliana]
            gi|332007169|gb|AED94552.1| protein embryo defective 3012
            [Arabidopsis thaliana]
          Length = 1923

 Score =  377 bits (968), Expect = e-102
 Identities = 198/390 (50%), Positives = 261/390 (66%), Gaps = 1/390 (0%)
 Frame = +2

Query: 5    YVKAQTFILQAKNRGITTLYVSARQQSGREIVSQCIKVEVYAPLSIRPSNIYLVPGASYV 184
            +V   +F + A+  GITTLYVSARQQSG +++SQ IKVEVY+P  + P  I+LVPGASYV
Sbjct: 1102 HVATSSFKIAARRLGITTLYVSARQQSGGKVLSQTIKVEVYSPPRLHPQGIFLVPGASYV 1161

Query: 185  LTVEGGPTIGGYVEYESLDDETAIIHKSFGRLSAIAPGNTTLVARFHSNSDKVMCHAFGN 364
            LT+EGGPT+   V+Y ++D+E A I KS GRL A +PGNTT+ A  + +   V+C A GN
Sbjct: 1162 LTIEGGPTMNVSVDYTTVDNEVAKIEKS-GRLYATSPGNTTIYATIYGSEGAVICQAIGN 1220

Query: 365  VAVAVPPSIMLNVQSEQVAIGSDMPIYPSFANGNLFSLYEPCKKYEWRVEDEDVLTFKVT 544
              V +P + ML  QS+ VA+G +MP+ PSF  G+L S YE C  Y+W +EDE VL F   
Sbjct: 1221 AEVGLPATAMLVAQSDTVAVGHEMPVSPSFPEGDLLSFYELCSAYKWTIEDEKVLIFI-- 1278

Query: 545  DLLHGHKHGSSSLDLEENGSNDNLDPRFIRVLYGKSSGRTHVNVSLSCNFVSRS-FSQSS 721
                     +SS+++EEN         F+ V+ G+S+G+T V ++ SC+FVS   +S+S 
Sbjct: 1279 ---------ASSINVEENAG-------FVNVVQGRSAGKTRVTIAFSCDFVSPGLYSESR 1322

Query: 722  FYTASITLYVVPDLPLALGKPATWVLPPHYITSNLLPSSSESYGQGDAQSSKGTITYSLL 901
             Y AS+ L VVPDLPL+LG P TWVLPP Y +S LLPSSSE     D QS +G I YS+L
Sbjct: 1323 TYEASMILSVVPDLPLSLGAPMTWVLPPFYTSSGLLPSSSEPQKHRDGQSHRGNIVYSIL 1382

Query: 902  KEYGGQNNIELLNEAISIGSVKIQTRESNNIGCIQAKDRLTGRFEIASCVRVAEVAQIRV 1081
            K+   + + E   + ISI    ++T +SNN+ CIQAKDR +GR EIA+CVRVAEVAQIR+
Sbjct: 1383 KDCSSRADFE--RDTISINGGSVKTTDSNNVACIQAKDRTSGRIEIAACVRVAEVAQIRM 1440

Query: 1082 SRHAFPFHNVDLAVGAELSVPLIYYDAFGI 1171
                 PFH +DLAVG EL +P+ YYD  GI
Sbjct: 1441 KSEGIPFHVIDLAVGGELELPINYYDTLGI 1470