BLASTX nr result

ID: Cnidium21_contig00021400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021400
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    95   3e-17
emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    87   6e-15
ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
ref|NP_196714.1| embryonic flower 1 (EMF1) [Arabidopsis thaliana...    61   4e-07
ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp....    60   6e-07

>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 85/265 (32%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
 Frame = -3

Query: 946  NEAIPAMQLLSLMGAGTPSRSPFTVNAK-KVLERPFFPCNNHPS------IGMDERANLF 788
            NE IPAM LLSLM AG  S +P  ++   K L+RP    N  P        G  +  N  
Sbjct: 1043 NETIPAMHLLSLMDAGVQSSAPINMDVNSKFLKRPSITHNPEPKEFSRLDTGAFKAVNTV 1102

Query: 787  EKPLFPQNH----QVTENSGPGPSVYKSTASTTQ--------MPSAYYGPYIVTSQQPEK 644
            + P  P NH    Q+ EN      V ++TA  +         +  A   P  V   + ++
Sbjct: 1103 KHP--PPNHHGKNQLAENFRDHIPVIQTTAGASSSSILHDKGIRKATDFPIQVVQDKDKR 1160

Query: 643  ATYTQQNKDWMVRTPVGSAGVSDMISGCNLHQGKQKGILGASVDVVFPSQPKALKITENQ 464
                 + ++ + R+   + G      G       Q    GAS   +FP   +AL+   N+
Sbjct: 1161 KGSDSRTQNKVNRSQKSAYGGFGTNCGSIPAHNMQTMFYGASDSSMFPLPFRALE-KPNK 1219

Query: 463  KDVGSCQMHGTIRPLRDISKEEVCGVNRNPADFTIPEAGNMYMIRVGDLKFSKDYLVSRV 284
              + S   + T+   +  S+ EVC VNRNPADFT+PEAGNMYMI   DLKF K+  V  V
Sbjct: 1220 HKLESPANNRTVHAHKSSSETEVCSVNRNPADFTVPEAGNMYMIVGEDLKFEKE--VPFV 1277

Query: 283  GGFEGQRRHGLKLTASKGQAVGRGQ 209
             G    +  G K         GRG+
Sbjct: 1278 NGSRSLKLDGPKRQRKLPAVKGRGR 1302


>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 31/272 (11%)
 Frame = -3

Query: 946  NEAIPAMQLLSLMGAGTPSRSPFTVNA-KKVLERPFFPCNNHP------SIGMDERANLF 788
            NE IPAM LLSLM +G  SR+PF+++   K L++  FP +          IG  +  N  
Sbjct: 1118 NENIPAMHLLSLMDSGMQSRTPFSMDGDSKFLKKSAFPRDYDSREFSGLEIGAYKARNSS 1177

Query: 787  EKPLFP---QNHQVTENSGPGPSVYK--STASTTQMPSAYYGPYIVTSQQPEKATYTQQN 623
             +P      +NH    +     +V    + AS++Q    +    ++    P       + 
Sbjct: 1178 RQPSSDHCGKNHLAERSCACSLAVTSVGAFASSSQKDGNFKPAGLIDQVLPRSRG---KE 1234

Query: 622  KDWMVRTPVGSAGVSDMISG--CNLHQGK----------QKGILGASVDVVFPSQPKALK 479
            K  ++  P+ + G +   S   C  + G           QK   GAS  + FP QP  + 
Sbjct: 1235 KSKVLPPPIQNRGCTSRKSSSTCGDYSGTNHESIPIHDTQKRFPGASNSMRFPLQPHTI- 1293

Query: 478  ITENQKDVGSCQMH---GTIRPLRDISKEEVCGVNRNPADFTIPEAGNMYMIRVGDLKFS 308
              EN  +  + + H   GT  P+   S+ E+C +N+NPADF++P AGN+YMI   DLKF 
Sbjct: 1294 --ENSIECIALETHCNGGTFWPINSRSETEICSINKNPADFSVPVAGNIYMIGAEDLKFG 1351

Query: 307  KDYLVSRVGGFEG----QRRHGLKLTASKGQA 224
            K        G       +++  +KLT+ K +A
Sbjct: 1352 KSISSENRNGLINVDGHKKKRVVKLTSVKERA 1383


>ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|222866242|gb|EEF03373.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 84/261 (32%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
 Frame = -3

Query: 946  NEAIPAMQLLSLMGAGTPSRSPFTVNAK-KVLERPFFPCNNHPS------IGMDERANLF 788
            NE IPAM LLSLM AG  S +P  ++   K L+RP    N  P        G  +  +  
Sbjct: 277  NETIPAMHLLSLMDAGVQSSAPINMDVNPKFLKRPAIIHNAEPKEFSRLDTGAYKVISSV 336

Query: 787  EKPLFPQNH----QVTENSGPGPSVYKSTASTTQM----------PSAYYGPYIVTSQQP 650
            + P  P+NH    Q+ E+S     + ++TA  + +          P     P I   ++ 
Sbjct: 337  KHP--PRNHNGKNQLAESSRDLIPIMQTTAGASSLSIRHDKRIRKPVDLPSPVIQYKERR 394

Query: 649  EKATYTQQNKDWMVRTPVGSAGVSDMISGCNLHQGKQKGILGASVDVVFPSQPKALKITE 470
            + +    QNK    +T   + G          H  +     GA    VF    +AL+   
Sbjct: 395  KGSDSRTQNKANRSQTSA-NGGFGTNCGSIPAHSMRIMSF-GAPDPSVFSLPFRALE-NP 451

Query: 469  NQKDVGSCQMHGTIRPLRDISKEEVCGVNRNPADFTIPEAGNMYMIRVGDLKFSKDYLVS 290
            N+  + S   +  + P +  S+ EVC VNRNPADFTIPEAGNMYMI    L+F KD  V 
Sbjct: 452  NKDKLKSLDNNRIVHPHKSSSETEVCSVNRNPADFTIPEAGNMYMIAGEALRFEKD--VP 509

Query: 289  RVGGFEGQRRHGLKLTASKGQ 227
               G      H LKL   K Q
Sbjct: 510  FANG-----SHSLKLDGRKRQ 525


>ref|NP_196714.1| embryonic flower 1 (EMF1) [Arabidopsis thaliana]
            gi|75264387|sp|Q9LYD9.1|EMF1_ARATH RecName: Full=Protein
            EMBRYONIC FLOWER 1 gi|15430697|gb|AAK98528.1|AF319968_1
            embryonic flower 1 [Arabidopsis thaliana]
            gi|7573410|emb|CAB87713.1| putative protein [Arabidopsis
            thaliana] gi|332004309|gb|AED91692.1| embryonic flower 1
            (EMF1) [Arabidopsis thaliana]
          Length = 1096

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 29/241 (12%)
 Frame = -3

Query: 940  AIPAMQLLSLMGAGTPSRSPFTVNAKKVLERPFFPCNNHPSIGMDERANLFEKPLFPQNH 761
            +IPA+ LLSL+     S +P   +      +  FP  N                   Q+ 
Sbjct: 856  SIPALHLLSLLDPRLRSTTPADQHGNTKFTKRHFPPAN-------------------QSK 896

Query: 760  QVTENSGPGPSVYKSTASTTQMPSAYYGPYIVTSQQPEKATYTQQNKDWMVRTPVGSAGV 581
            +  E      S  KS  ST Q+P   Y      +Q+P +       K + +  P+G++ +
Sbjct: 897  EFIELQTGDSS--KSAYSTKQIPFDLYSKRF--TQEPSR-------KSFPITPPIGTSSL 945

Query: 580  SDMISGCNLHQGKQKG----------------------------ILGASVDVVFPSQPKA 485
            S   +  + H  ++K                             +LGAS  ++ P +   
Sbjct: 946  SFQNASWSPHHQEKKTKRKDTFAPVYNTHEKPVFASSNDQAKFQLLGASNSMMLPLKFHM 1005

Query: 484  LKITENQK-DVGSCQMHGTIRPLRDISKEEVCGVNRNPADFTIPEAGNMYMIRVGDLKFS 308
                + QK    SC  + +  P+++ S   VC VNRNPADFTIPE GN+YM+    LK  
Sbjct: 1006 TDKEKKQKRKAESCNNNASAGPVKNSSGPIVCSVNRNPADFTIPEPGNVYMLTGEHLKVR 1065

Query: 307  K 305
            K
Sbjct: 1066 K 1066


>ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317316|gb|EFH47738.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1102

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
 Frame = -3

Query: 940  AIPAMQLLSLMGAGTPSRSPFTVNAKKVLERPFFPCNNHPSIGMDERANLFEKPLFPQN- 764
            +IPA+ LLSLM     S +P   +      +  FP  N     ++ +     K  +    
Sbjct: 861  SIPALHLLSLMDPRLRSTTPADQHGNTKFTKRHFPPVNQSKEFIELQTGDSSKSAYSTKQ 920

Query: 763  -----------HQVTENSGPGPSVYKSTASTTQMPSAYYGPYIVTSQQPEKATYTQQNKD 617
                       H+ +  S P      +++ + Q   A + P+       EK T   + KD
Sbjct: 921  IPFDLYSKRFAHETSRKSFPIIPPLGTSSFSFQNAQASWSPH------QEKKT---KRKD 971

Query: 616  WMVRTPVGSAGVSDMISGCNLHQGKQKGILGASVDVVFPSQPKALKITENQK-DVGSCQM 440
                 PV +     + +  N  Q K + +LGAS  ++ P +       + QK    SC  
Sbjct: 972  --TYAPVYNTHEKSVFASTN-DQAKFQ-LLGASNSMMLPLKFHMRDKEKKQKRKAESCNN 1027

Query: 439  HGTIRPLRDISKEEVCGVNRNPADFTIPEAGNMYMIRVGDLKFSKDYLVSR 287
            + +  P+++ S   VC VNRNPADFTIPE GN+YM+    LK  K   V +
Sbjct: 1028 NASAWPVKNSSGSIVCSVNRNPADFTIPEPGNVYMLTGEHLKARKRTTVKK 1078


Top