BLASTX nr result

ID: Cnidium21_contig00021396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021396
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598394.1| F-box protein [Medicago truncatula] gi|35834...    77   9e-12
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    76   1e-11
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    75   3e-11
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    74   4e-11
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    73   1e-10

>ref|XP_003598394.1| F-box protein [Medicago truncatula]
           gi|358348378|ref|XP_003638224.1| F-box protein [Medicago
           truncatula] gi|355487442|gb|AES68645.1| F-box protein
           [Medicago truncatula] gi|355504159|gb|AES85362.1| F-box
           protein [Medicago truncatula]
          Length = 370

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 70/212 (33%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
 Frame = +3

Query: 15  EKKAVTLTLPDDIIHTEILSRLLPKHIQRCRLVCKSWSCLFSTSNFVNLHLKRQQLL--- 185
           EK+  +  +PDDI+ + ILS+L  K I+R    CKSWS LF   NF+N    R  LL   
Sbjct: 6   EKEVSSKYIPDDIVFS-ILSKLSVKSIKRFSCACKSWSSLFENPNFINKF--RNNLLSKS 62

Query: 186 HFLEEDRIIV----KRLDVDEGIRILSR---SNAISVSKVPRI-------CDTLLG-SIN 320
           H L +D  ++       D    + +LS     N + +   P +          +LG +IN
Sbjct: 63  HPLYDDACLILNHFSGPDYHWNVYLLSGDRFENKVKLDLPPSLPIENGFDYIRILGYAIN 122

Query: 321 GLICMSTIR-GKRFCLWNPAIAQVKLFDLPPPHLHPGKANCYHYLGGFCWDHVQNDYKVL 497
           G +C+       R  LWNPA  +VK   +PP H    K      L GF +DHV++DYKV+
Sbjct: 123 GTLCIFDYHTNTRVALWNPATQEVKA--IPPSHGVIPKVTTQFQLHGFGYDHVRDDYKVI 180

Query: 498 VFC-YDVFDAPPSQLC-------IYSTNSATW 569
               Y  F+  P           IYS  S +W
Sbjct: 181 QHVNYFTFNDDPCDGLGHERFWEIYSLKSNSW 212


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 10/190 (5%)
 Frame = +3

Query: 39  LPDDIIHTEILSRLLPKHIQRCRLVCKSWSCLFSTSNFVNLHLKRQQLLHFLEEDRIIVK 218
           LP +++ T+ILSRL  K + R R   KSW  L  + +F ++HL R      L  +  ++ 
Sbjct: 5   LPREVV-TDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSL---SLTSNTTLIL 60

Query: 219 RLDVDEGIRILSRSNAISVSKVPRIC----DTLLGSINGLICMSTIRGKRFCLWNPAIAQ 386
           RLD D         +       P +C     TLLGS NGL+C+S +       WNP++ Q
Sbjct: 61  RLDSDLYQTNFPTLDPPLFLNHPLMCYSNNITLLGSCNGLLCISNV-ADDIAFWNPSLRQ 119

Query: 387 VKL---FDLPPPHLHPGKANCYHYLGGFCWDHVQNDYKVLVFCY--DVFDAP-PSQLCIY 548
            ++     LP   LHP        + GF +DH   DYK++   Y  D+ D    SQ+ +Y
Sbjct: 120 HRILPSLPLPRRRLHPDTTLFAARVYGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLY 179

Query: 549 STNSATWTLL 578
           +  +  W  L
Sbjct: 180 TLRANAWKTL 189


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
 Frame = +3

Query: 39  LPDDIIHTEILSRLLPKHIQRCRLVCKSWSCLFSTSNFVNLHLKRQQLLHFLEEDRIIVK 218
           LPD+++  EILSRL  K + + R VCKSW  L S   F+  HL            RII+ 
Sbjct: 49  LPDELV-VEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILS 107

Query: 219 RLDVDEGIRILSRSNAISVSKVPRICDTL-------------LGSINGLICMSTIRGKRF 359
               +  ++  S S+  + +    +CD L             +GS NGL+C + I+G   
Sbjct: 108 ATTAEFHLKSCSLSSLFN-NPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCV 165

Query: 360 CLWNPAIAQVKLFDLPPPHLHPGKANCYHYLGGFCWDHVQNDYKVL-VFCYDVFDAPPSQ 536
            LWNP+I   ++    PP  +  +  C+    G  +DHV  DYKV+ VFC         +
Sbjct: 166 LLWNPSI---RVSKKSPPLGNNWRPGCFTAF-GLGYDHVNEDYKVVAVFCDPSEYFIECK 221

Query: 537 LCIYSTNSATW 569
           + +YS  + +W
Sbjct: 222 VKVYSMATNSW 232


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 14/225 (6%)
 Frame = +3

Query: 39  LPDDIIHTEILSRLLPKHIQRCRLVCKSWSCLFSTSNFV--NLHLKRQQLLHFLEEDRII 212
           LP+++I  EIL +L  K + R R VCKSW  + S   F+   LH   Q   HF    RII
Sbjct: 8   LPEELI-LEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQN-THFTTNHRII 65

Query: 213 VKRLDVDEGIRILS----RSNAISVS-------KVPRICDTLLGSINGLICMSTIRGKRF 359
           +     +  ++  S     +N  +VS       K     D ++GS NGL+C + I+G   
Sbjct: 66  LSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCV 124

Query: 360 CLWNPAIAQVKLFDLPPPHLHPGKANCYHYLGGFCWDHVQNDYKVL-VFCYDVFDAPPSQ 536
            LWNP+I   K       +  PG   C+    G  +DHV +DYKV+ VFC        S+
Sbjct: 125 LLWNPSIRVSKKSPPLGNNWRPGCFTCF----GLGYDHVNDDYKVVAVFCDPNEFFSESK 180

Query: 537 LCIYSTNSATWTLLRIPQNPRLPEPIYETASISPPSTIVKGTPYW 671
           + +YS  + TW   +I   P    P Y+ +S       V GT  W
Sbjct: 181 VKVYSMATNTWR--KIHDFPHGVSP-YQNSS----GKFVSGTLNW 218


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
 Frame = +3

Query: 39  LPDDIIHTEILSRLLPKHIQRCRLVCKSWSCLFSTSNFVNLHLKRQQLLHFLEEDRIIVK 218
           LPD+++  EILSRL  K + + R VCKSW  L     F+  HL            RII+ 
Sbjct: 49  LPDELV-VEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILS 107

Query: 219 RLDVDEGIRILSRSNAISVSKVPRICDTL-------------LGSINGLICMSTIRGKRF 359
               +  ++  S S+    + +  +CD L             +GS NGL+C + I+G   
Sbjct: 108 ATTAEFHLKSCSLSSLF--NNLSTVCDELNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCV 164

Query: 360 CLWNPAIAQVKLFDLPPPHLHPGKANCYHYLGGFCWDHVQNDYKVL-VFCYDVFDAPPSQ 536
            LWNP+I   ++    PP  +  +  C+    G  +DHV  DYKV+ VFC         +
Sbjct: 165 LLWNPSI---RVSKKSPPLGNNWRPGCFTAF-GLGYDHVNEDYKVVAVFCDPSEYFIECK 220

Query: 537 LCIYSTNSATW 569
           + +YS  + +W
Sbjct: 221 VKVYSMATNSW 231


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