BLASTX nr result

ID: Cnidium21_contig00021382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021382
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   216   6e-54
ref|XP_004172951.1| PREDICTED: U-box domain-containing protein 7...   211   2e-52
ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7...   211   2e-52
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19...   207   3e-51
ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [S...   206   5e-51

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  216 bits (550), Expect = 6e-54
 Identities = 114/208 (54%), Positives = 143/208 (68%), Gaps = 5/208 (2%)
 Frame = -3

Query: 892 SEKGSYDCKTTLDHHTAEVRAVTIHPSQKYFVTASFDSTWQFYDLASE-SHAPVACCKGS 716
           S+  +Y+C+  L  HTAEV+AVT+H +  YFVTAS D+TW FYDL+S      VA   GS
Sbjct: 296 SDNENYNCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVADASGS 355

Query: 715 ESFSTAVFHPDGRILGTCASGGLVRFWDVAKQDDILKFDAHTGQVTSIAFSENGYTLATA 536
           E +++A FHPDG ILGT  S  LV+ WDV  Q ++ +FD H G VT+I+FSENGY LATA
Sbjct: 356 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATA 415

Query: 535 AGDGVKLWDLRFLRTMKTF-PSDDKSQTRSVDFDHSGKYLATGGASMISIYEIA---AGS 368
           A DGVKLWDLR LR  +TF P D  + T SV+FDHSG YLA  G S I +Y++A   +  
Sbjct: 416 AHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAG-SDIRVYQVANVKSEW 474

Query: 367 DPITTFSHMSGKGDVSCVKFGKDAKYVA 284
           + I TF  +SG G  +CVKFG DAKY+A
Sbjct: 475 NCIKTFPDLSGTGKATCVKFGPDAKYLA 502


>ref|XP_004172951.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis
           sativus]
          Length = 299

 Score =  211 bits (536), Expect = 2e-52
 Identities = 111/210 (52%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
 Frame = -3

Query: 898 KKSEKGSYDCKTTLDHHTAEVRAVTIHPSQKYFVTASFDSTWQFYDLASE-SHAPVACCK 722
           ++S+ G+Y+C+  L  HTAEV+AVT+H +  +FVTAS D+TW FY+LAS      VA   
Sbjct: 69  QQSDDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDS 128

Query: 721 GSESFSTAVFHPDGRILGTCASGGLVRFWDVAKQDDILKFDAHTGQVTSIAFSENGYTLA 542
            +E +++A FHPDG ILGT  S  LV+ WDV  Q ++ KFD H G VT+I+FSENGY LA
Sbjct: 129 ETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLA 188

Query: 541 TAAGDGVKLWDLRFLRTMKTF-PSDDKSQTRSVDFDHSGKYLATGGASMISIYEIAAGSD 365
           TAA DGVKLWDLR L+  +TF P D  + T SVDFDHSG YLA  G S I +Y++A+   
Sbjct: 189 TAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAG-SDIRVYQVASVKS 247

Query: 364 P---ITTFSHMSGKGDVSCVKFGKDAKYVA 284
               I T   +SG G  +C+KFG DAKY+A
Sbjct: 248 EWNCIKTLPDLSGTGKATCLKFGPDAKYLA 277


>ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis
           sativus]
          Length = 522

 Score =  211 bits (536), Expect = 2e-52
 Identities = 111/210 (52%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
 Frame = -3

Query: 898 KKSEKGSYDCKTTLDHHTAEVRAVTIHPSQKYFVTASFDSTWQFYDLASE-SHAPVACCK 722
           ++S+ G+Y+C+  L  HTAEV+AVT+H +  +FVTAS D+TW FY+LAS      VA   
Sbjct: 292 QQSDDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDS 351

Query: 721 GSESFSTAVFHPDGRILGTCASGGLVRFWDVAKQDDILKFDAHTGQVTSIAFSENGYTLA 542
            +E +++A FHPDG ILGT  S  LV+ WDV  Q ++ KFD H G VT+I+FSENGY LA
Sbjct: 352 ETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLA 411

Query: 541 TAAGDGVKLWDLRFLRTMKTF-PSDDKSQTRSVDFDHSGKYLATGGASMISIYEIAAGSD 365
           TAA DGVKLWDLR L+  +TF P D  + T SVDFDHSG YLA  G S I +Y++A+   
Sbjct: 412 TAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAG-SDIRVYQVASVKS 470

Query: 364 P---ITTFSHMSGKGDVSCVKFGKDAKYVA 284
               I T   +SG G  +C+KFG DAKY+A
Sbjct: 471 EWNCIKTLPDLSGTGKATCLKFGPDAKYLA 500


>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
           pre-mRNA-splicing factor 19 [Zea mays]
           gi|224030373|gb|ACN34262.1| unknown [Zea mays]
           gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
           factor 19 isoform 1 [Zea mays]
           gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
           factor 19 isoform 2 [Zea mays]
          Length = 526

 Score =  207 bits (527), Expect = 3e-51
 Identities = 109/210 (51%), Positives = 145/210 (69%), Gaps = 5/210 (2%)
 Frame = -3

Query: 898 KKSEKGSYDCKTTLDHHTAEVRAVTIHPSQKYFVTASFDSTWQFYDLASESH-APVACCK 722
           +++E G+Y+C  TL  HTAEV AVT+H +QKYFV+AS D++W FYD+++ S    V    
Sbjct: 291 QENENGNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEAS 350

Query: 721 GSESFSTAVFHPDGRILGTCASGGLVRFWDVAKQDDILKFDAHTGQVTSIAFSENGYTLA 542
           G E +++A FHPDG ILGT  +  +V+ WDV  Q ++ KF+ H G VT+++FSENGY LA
Sbjct: 351 GQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLA 410

Query: 541 TAAGDGVKLWDLRFLRTMKTF-PSDDKSQTRSVDFDHSGKYLATGGASMISIYEIA---A 374
           TAA DGVKLWDLR LR  +TF P D  + T +V+FD SG YLA GG S I +Y++A   A
Sbjct: 411 TAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGG-SDIRVYQVANVKA 469

Query: 373 GSDPITTFSHMSGKGDVSCVKFGKDAKYVA 284
             + I T   +SG G V+ VKFG DAKY+A
Sbjct: 470 EWNLIKTLPDLSGTGKVTSVKFGADAKYIA 499


>ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor]
           gi|241918360|gb|EER91504.1| hypothetical protein
           SORBIDRAFT_01g019790 [Sorghum bicolor]
          Length = 535

 Score =  206 bits (525), Expect = 5e-51
 Identities = 108/210 (51%), Positives = 144/210 (68%), Gaps = 5/210 (2%)
 Frame = -3

Query: 898 KKSEKGSYDCKTTLDHHTAEVRAVTIHPSQKYFVTASFDSTWQFYDLASESH-APVACCK 722
           +++E GSY+C  TL  HTAEV AVT+H +QKYFV+AS D++W FYD+++ S    V    
Sbjct: 300 QENENGSYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDMSTGSCLTQVGEAS 359

Query: 721 GSESFSTAVFHPDGRILGTCASGGLVRFWDVAKQDDILKFDAHTGQVTSIAFSENGYTLA 542
           G E +++A FHPDG ILGT  +  + + WDV  Q ++ KF+ H G VT+++FSENGY LA
Sbjct: 360 GQEGYTSAAFHPDGLILGTGTTDAVAKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLA 419

Query: 541 TAAGDGVKLWDLRFLRTMKTF-PSDDKSQTRSVDFDHSGKYLATGGASMISIYEIA---A 374
           TAA DGVKLWDLR LR  +TF P D  + T +V+FD SG YLA GG S I +Y++A   +
Sbjct: 420 TAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGG-SDIRVYQVANVKS 478

Query: 373 GSDPITTFSHMSGKGDVSCVKFGKDAKYVA 284
             + I T   +SG G V+ VKFG DAKY+A
Sbjct: 479 EWNLIKTLPDLSGTGKVTSVKFGADAKYIA 508


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