BLASTX nr result

ID: Cnidium21_contig00021370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021370
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [...    87   2e-15
ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, ...    87   2e-15
ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795...    83   2e-14
ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,...    80   2e-13
ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799...    77   2e-12

>ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
           gi|355525053|gb|AET05507.1| Heterogeneous nuclear
           ribonucleoprotein A1 [Medicago truncatula]
          Length = 476

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -3

Query: 263 RNLNAFQNGSPNRYGSPVGH--GIAGTGSVFNSMNRNTWGDGGLNYAKNLANSAEFMGSG 90
           R LN +  G  NR+GSPVG+  G  G+ S F+S+ RN WG+G LNY  + ANS  ++GSG
Sbjct: 260 RGLNPYFIGGSNRFGSPVGYESGNGGSNSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSG 319

Query: 89  SANTGLINALGNIGAIWGPSPISGQDRG 6
           S N G  NA GN G  W  SPISG   G
Sbjct: 320 SGNVG-GNAFGNTGVNWSSSPISGHGGG 346


>ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
           [Medicago truncatula] gi|355519311|gb|AET00935.1|
           Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like
           protein [Medicago truncatula]
          Length = 479

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -3

Query: 263 RNLNAFQNGSPNRYGSPVGH--GIAGTGSVFNSMNRNTWGDGGLNYAKNLANSAEFMGSG 90
           R LN +  G  NR+GSPVG+  G  G+ S F+S+ RN WG+G LNY  + ANS  ++GSG
Sbjct: 277 RGLNPYFIGGSNRFGSPVGYESGNGGSNSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSG 336

Query: 89  SANTGLINALGNIGAIWGPSPISGQDRG 6
           S N G  NA GN G  W  SPISG   G
Sbjct: 337 SGNVG-GNAFGNTGVNWSSSPISGHGGG 363


>ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
          Length = 479

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -3

Query: 263 RNLNAFQNGSPNRYGSPVGH--GIAGTGSVFNSMNRNTWGDGGLNYAKNLANSAEFMGSG 90
           R +N +  GS NR+GSPVG+  G  G  S F+S+ RN WG+GGL+Y  + ANS  ++GSG
Sbjct: 277 RGINPYFIGSSNRFGSPVGYESGNGGNNSFFSSVTRNLWGNGGLSYGTSSANSNAYIGSG 336

Query: 89  SANTGLINALGNIGAIWGPSPISGQDRG 6
           S + G  N  GN G  W  S ISGQ  G
Sbjct: 337 SGSAG-GNTFGNTGVNWSSSAISGQQGG 363


>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223532357|gb|EEF34155.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 456

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = -3

Query: 257 LNAFQNGSPNRYGSPVGH--GIAGTGSVFNSMNRNTWGDGGLNYAKNLANSAEFMGSGSA 84
           L+   NG+ +RY SP+G+  G  G  SV NS  R  WG+G +N++ N  NS+ F+GSG+ 
Sbjct: 279 LSPSYNGNSSRYDSPIGYNGGNVGNSSVLNSPARTLWGNGTINHSSNSTNSSSFLGSGTG 338

Query: 83  NTGLINALGNIGAIWGPSPISGQDRG 6
           N G I + G+IGA+WG S  SGQ  G
Sbjct: 339 NPG-IGSFGSIGALWGSSASSGQGGG 363


>ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
          Length = 475

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = -3

Query: 263 RNLNAFQNGSPNRYGSPVGH--GIAGTGSVFNSMNRNTWGDGGLNYAKNLANSAEFMGSG 90
           R +N +  GS NR+GSPVG+  G  G  S F+S+ RN WG+GGL    + ANS  ++GSG
Sbjct: 277 RGVNPYFIGSSNRFGSPVGYESGNGGNNSFFSSVTRNLWGNGGL----SSANSNAYIGSG 332

Query: 89  SANTGLINALGNIGAIWGPSPISGQDRG 6
           S + G  N  GN G  WG S ISGQ  G
Sbjct: 333 SGSVG-GNTFGNTGVNWGSSAISGQQGG 359


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