BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021345
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06

>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 33/107 (30%)
 Frame = +2

Query: 365 PLTKPTFTI--------RCGPRD----------------QAAQSLKRYPQNDGV------ 454
           P+ KP  TI        RCGPRD                QA QSLKR  + D        
Sbjct: 15  PIKKPVQTITTTSYTPIRCGPRDNRGPLMKGRVLSIEAIQAIQSLKRAHRGDPTKIDDFL 74

Query: 455 ---LSRLLKSDLIAALNELLRQDETELAVKVYSAIRSELWYTGDLCI 586
              LSRL+K+DL+A LNELLRQD+ +LA++V+SA+RSELWY  +L +
Sbjct: 75  SKTLSRLVKADLLATLNELLRQDQCDLALRVFSAVRSELWYKTELSL 121


>ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449491766|ref|XP_004158997.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 230

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 25/85 (29%)
 Frame = +2

Query: 380 TFTIRCGPRD----------------QAAQSLKRYPQNDGV---------LSRLLKSDLI 484
           +F +RCGPRD                QA QSLKR  ++D           LSRLLK+DL+
Sbjct: 30  SFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLV 89

Query: 485 AALNELLRQDETELAVKVYSAIRSE 559
           A L ELLRQ+   LA++V++ I+SE
Sbjct: 90  ATLKELLRQERCALALEVFAVIKSE 114