BLASTX nr result

ID: Cnidium21_contig00021330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021330
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinu...   196   2e-48
ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subuni...   194   8e-48
ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002886163.1| anaphase-promoting complex, subunit 10 famil...   186   1e-45

>ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinus communis]
           gi|223539247|gb|EEF40840.1| anaphase-promoting complex,
           putative [Ricinus communis]
          Length = 192

 Score =  196 bits (498), Expect = 2e-48
 Identities = 97/136 (71%), Positives = 105/136 (77%)
 Frame = -1

Query: 408 ATEVDDESKVVGGNDELVVDESLREMAKNAAWSVSSCKPGNGVISLRHHNLDSFWQSDGA 229
           ++E ++E K+ GGN  LVVD+ LREM K AAWSVSSCKPGNGV SLR  NLDSFWQSDGA
Sbjct: 5   SSEGEEEGKITGGNQHLVVDDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDSFWQSDGA 64

Query: 228 QPHLVNIQFXXXXXXXXXXXXXXXXXDESYTPSKIAIRAGDGFHNLKEIKIVELDKPTGW 49
           QPHLVNIQF                 DESYTPSKI+IRAGDGFHNLKEIK VEL KPTGW
Sbjct: 65  QPHLVNIQFQKKVKLQLVLLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGW 124

Query: 48  VYISLSGNDPREAFVN 1
           VY+SLSGNDPRE FVN
Sbjct: 125 VYLSLSGNDPRETFVN 140


>ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subunit 10 [Vitis vinifera]
           gi|297735140|emb|CBI17502.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  194 bits (492), Expect = 8e-48
 Identities = 96/136 (70%), Positives = 106/136 (77%)
 Frame = -1

Query: 408 ATEVDDESKVVGGNDELVVDESLREMAKNAAWSVSSCKPGNGVISLRHHNLDSFWQSDGA 229
           ++E ++E K++GGN  LVVDE LREMAK AAWSVSSCK GNGV+ LR  NLD++WQSDGA
Sbjct: 5   SSEGEEEGKMIGGNQHLVVDEDLREMAKKAAWSVSSCKAGNGVLLLRDDNLDTYWQSDGA 64

Query: 228 QPHLVNIQFXXXXXXXXXXXXXXXXXDESYTPSKIAIRAGDGFHNLKEIKIVELDKPTGW 49
           QPHLVNIQF                 DESYTPSKI+IRAGDGFHNLKEIK VEL KPTGW
Sbjct: 65  QPHLVNIQFLKKVKLQLVVIYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGW 124

Query: 48  VYISLSGNDPREAFVN 1
           VYISLSGNDPRE FVN
Sbjct: 125 VYISLSGNDPRETFVN 140


>ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|222836880|gb|EEE75273.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/136 (67%), Positives = 105/136 (77%)
 Frame = -1

Query: 408 ATEVDDESKVVGGNDELVVDESLREMAKNAAWSVSSCKPGNGVISLRHHNLDSFWQSDGA 229
           ++E ++E K+ GGN  LV+++ LREM K AAWSVSSCKPGNGV SLR  NLD++WQSDGA
Sbjct: 5   SSEGEEEGKITGGNKHLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYWQSDGA 64

Query: 228 QPHLVNIQFXXXXXXXXXXXXXXXXXDESYTPSKIAIRAGDGFHNLKEIKIVELDKPTGW 49
           QPHLVNIQF                 DESYTPSKI+IRAGDGFHNLKEIK +EL KPTGW
Sbjct: 65  QPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELVKPTGW 124

Query: 48  VYISLSGNDPREAFVN 1
           VY+SLSGNDPRE FVN
Sbjct: 125 VYLSLSGNDPRETFVN 140


>ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|222853147|gb|EEE90694.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/136 (67%), Positives = 105/136 (77%)
 Frame = -1

Query: 408 ATEVDDESKVVGGNDELVVDESLREMAKNAAWSVSSCKPGNGVISLRHHNLDSFWQSDGA 229
           ++E ++E K+ GGN  LV+++ LREM K AAWSVSSCKPGNGV SLR  NLD++WQSDGA
Sbjct: 5   SSEGEEEGKITGGNKLLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYWQSDGA 64

Query: 228 QPHLVNIQFXXXXXXXXXXXXXXXXXDESYTPSKIAIRAGDGFHNLKEIKIVELDKPTGW 49
           QPHLVNIQF                 DESYTPSKI+IRAGDGFHNLKEIK +EL KPTGW
Sbjct: 65  QPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELVKPTGW 124

Query: 48  VYISLSGNDPREAFVN 1
           VY+SLSGNDPRE FVN
Sbjct: 125 VYLSLSGNDPRETFVN 140


>ref|XP_002886163.1| anaphase-promoting complex, subunit 10 family [Arabidopsis lyrata
           subsp. lyrata] gi|297332003|gb|EFH62422.1|
           anaphase-promoting complex, subunit 10 family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/136 (65%), Positives = 105/136 (77%)
 Frame = -1

Query: 408 ATEVDDESKVVGGNDELVVDESLREMAKNAAWSVSSCKPGNGVISLRHHNLDSFWQSDGA 229
           ++E ++E K+ GGND+L++D+ LREM KNAAWSVSSCKPGNGV +LR  NL+++WQSDG 
Sbjct: 5   SSESEEEGKIRGGNDKLIIDDDLREMGKNAAWSVSSCKPGNGVTTLRDDNLETYWQSDGL 64

Query: 228 QPHLVNIQFXXXXXXXXXXXXXXXXXDESYTPSKIAIRAGDGFHNLKEIKIVELDKPTGW 49
           QPHL+NIQF                 DESYTPSKI+IRAGDGFHNLKEIK VEL KPTGW
Sbjct: 65  QPHLINIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKSVELVKPTGW 124

Query: 48  VYISLSGNDPREAFVN 1
           V +SLSG DPRE FVN
Sbjct: 125 VCLSLSGTDPRETFVN 140


Top