BLASTX nr result

ID: Cnidium21_contig00021284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021284
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38027.3| unnamed protein product [Vitis vinifera]              181   5e-44
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   181   5e-44
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   173   1e-41
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   171   4e-41
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/120 (71%), Positives = 104/120 (86%)
 Frame = +2

Query: 2   SYSEKQRLARTVIFGGLLSADMAESVHHKAKECGTVSSIIYPLSRDELNHHGLREDGCKM 181
           S+SEKQR+ARTVIFGGLL+ADMAE VH +A+E GTV S+ YPL ++EL HHGL +DGCK+
Sbjct: 159 SFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKI 218

Query: 182 DASSVLFTSVRSARACVALLHQKEICGGIVWARQLGGEGANTQKWKLIVRNLPYEKSETE 361
           DAS+VL++SV+ A A VA+LHQKEI GGIVWARQLGGEG+ TQKWKLIVRNLP++   TE
Sbjct: 219 DASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTE 278


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/120 (71%), Positives = 104/120 (86%)
 Frame = +2

Query: 2   SYSEKQRLARTVIFGGLLSADMAESVHHKAKECGTVSSIIYPLSRDELNHHGLREDGCKM 181
           S+SEKQR+ARTVIFGGLL+ADMAE VH +A+E GTV S+ YPL ++EL HHGL +DGCK+
Sbjct: 178 SFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKI 237

Query: 182 DASSVLFTSVRSARACVALLHQKEICGGIVWARQLGGEGANTQKWKLIVRNLPYEKSETE 361
           DAS+VL++SV+ A A VA+LHQKEI GGIVWARQLGGEG+ TQKWKLIVRNLP++   TE
Sbjct: 238 DASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTE 297


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/120 (70%), Positives = 100/120 (83%)
 Frame = +2

Query: 2   SYSEKQRLARTVIFGGLLSADMAESVHHKAKECGTVSSIIYPLSRDELNHHGLREDGCKM 181
           S SEKQR+ARTVIFGGL+++DMAE VH KA+E GTV SI YPLSR +L  HGL +DGC +
Sbjct: 171 SCSEKQRVARTVIFGGLINSDMAEEVHGKAREIGTVCSIKYPLSRKDLEQHGLLQDGCTL 230

Query: 182 DASSVLFTSVRSARACVALLHQKEICGGIVWARQLGGEGANTQKWKLIVRNLPYEKSETE 361
           DAS+VL+TSV+SARA VA LH+KEI GG +W RQLGGEG+ TQKWKLIVRNLP++  E E
Sbjct: 231 DASAVLYTSVKSARASVATLHRKEIGGGNIWVRQLGGEGSKTQKWKLIVRNLPFKAKENE 290


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/118 (70%), Positives = 99/118 (83%)
 Frame = +2

Query: 8   SEKQRLARTVIFGGLLSADMAESVHHKAKECGTVSSIIYPLSRDELNHHGLREDGCKMDA 187
           SEKQR+ARTVIFGGL+++DMAE VH KAKE GTV SI YPLS  +L  HGL +DGC +DA
Sbjct: 173 SEKQRVARTVIFGGLINSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHGLLQDGCTLDA 232

Query: 188 SSVLFTSVRSARACVALLHQKEICGGIVWARQLGGEGANTQKWKLIVRNLPYEKSETE 361
           S+VL+TSV+SARA VA LH+KEI GG VWARQLGGEG+ TQKWKLI+RNLP++  + E
Sbjct: 233 SAVLYTSVKSARASVATLHKKEIGGGNVWARQLGGEGSKTQKWKLIIRNLPFKAKDNE 290


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/118 (68%), Positives = 96/118 (81%)
 Frame = +2

Query: 8   SEKQRLARTVIFGGLLSADMAESVHHKAKECGTVSSIIYPLSRDELNHHGLREDGCKMDA 187
           SEKQR+ARTVIFGGLL+  MAE VH +AKE GTV S+ YPL ++EL  HGL +DGC+  A
Sbjct: 178 SEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGA 237

Query: 188 SSVLFTSVRSARACVALLHQKEICGGIVWARQLGGEGANTQKWKLIVRNLPYEKSETE 361
           S+VLFTSV+ AR+ VA+LHQKEI GGIVWARQLGGEG  TQKWKLI+RNLP++    E
Sbjct: 238 SAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNE 295


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